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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0127500 |
| Transcript ID | LotjaGi2g1v0127500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant invertase/pectin methylesterase inhibitor protein; TAIR: AT3G17220.1 pectin methylesterase inhibitor 2; Swiss-Prot: sp|Q9LUV1|PMEI2_ARATH Pectinesterase inhibitor 2; TrEMBL-Plants: tr|A0A1J7H0Z1|A0A1J7H0Z1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0127500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:46783590..46784372) extracted from Lotus japonicus Gifu genome v1.2.
CGATATTAAACTTTGAGGTCAGATTCTTACCCCTAAAAAGAAAATGAAGTTCACAACTATTTCATCGTTGTTGTTCATTC TCTCCTTACTTCTCATTTCTCATGCTTTTATGCCTGCAATGTGTGATACGTTGTATGAAACCATATGCCATGAAGTGAAG GAGGACAATGATAAGTGCGTGCTAATTTTGAAAAGCGACTCTAGAATCACCTCAACAAACAATTATCTCGACCTTTGTAC CTTCATCCTGGAGATGGCGATAGATAAAGCGACGAAAGGCCAAAATGACCTTATCAAGTTAATGAATACACACCCTACTC AAGCTATCAAACAATGTGCAACTTTGCACTATGGCCGGACTGTTTTATCATTAAGGAGTTCAATGAGTAATTTGGTTAAA GATCCTAAGAATGCAAGCTTTGATGCTAATGCTGCTGGTGATGGACCTGCCAATTGCGAGAGAGATATTAATGCAGAAAA AACTCATATTCCTTTTATTAATGATCTAAACGACAAGGTATTGTTACTTTGTAAAATTTCATTTCAAGCAACAACTCATC TTAAACATGATGGTTGACTATTTTGAAATTAGGCAAGAAACTATGGTGTCCCTTTTGATTTCCATTTATCAATGTAAGGT AATATAATTTATATATGAGGTCATGGTAAATCTAGGGTATAATGTTAAAATGATATTCTTTTTATCTTTTTATAAAGGTT TAATAGCACTTCGGGACCCCAATTTATATTTATTGTGCAATTTTGGTCATTAACAAAAAAAAT
CDS sequence (LotjaGi2g1v0127500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTCACAACTATTTCATCGTTGTTGTTCATTCTCTCCTTACTTCTCATTTCTCATGCTTTTATGCCTGCAATGTG TGATACGTTGTATGAAACCATATGCCATGAAGTGAAGGAGGACAATGATAAGTGCGTGCTAATTTTGAAAAGCGACTCTA GAATCACCTCAACAAACAATTATCTCGACCTTTGTACCTTCATCCTGGAGATGGCGATAGATAAAGCGACGAAAGGCCAA AATGACCTTATCAAGTTAATGAATACACACCCTACTCAAGCTATCAAACAATGTGCAACTTTGCACTATGGCCGGACTGT TTTATCATTAAGGAGTTCAATGAGTAATTTGGTTAAAGATCCTAAGAATGCAAGCTTTGATGCTAATGCTGCTGGTGATG GACCTGCCAATTGCGAGAGAGATATTAATGCAGAAAAAACTCATATTCCTTTTATTAATGATCTAAACGACAAGGTATTG TTACTTTGTAAAATTTCATTTCAAGCAACAACTCATCTTAAACATGATGGTTGA
Protein sequence (LotjaGi2g1v0127500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFTTISSLLFILSLLLISHAFMPAMCDTLYETICHEVKEDNDKCVLILKSDSRITSTNNYLDLCTFILEMAIDKATKGQ NDLIKLMNTHPTQAIKQCATLHYGRTVLSLRSSMSNLVKDPKNASFDANAAGDGPANCERDINAEKTHIPFINDLNDKVL LLCKISFQATTHLKHDG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| PANTHER | 3 | 173 | 171 | 3.6E-43 | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 18 | 21 | 4 | - | – | |
| Phobius | 22 | 177 | 156 | - | – | |
| Gene3D | 28 | 175 | 148 | 9.9E-12 | ||
| Pfam | 32 | 166 | 135 | 7.6E-8 | ||
| SUPERFAMILY | 32 | 173 | 142 | 3.66E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. |
Expression pattern of LotjaGi2g1v0127500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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