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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0148800 |
| Transcript ID | LotjaGi2g1v0148800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box protein PP2-A13; TAIR: AT3G61060.1 phloem protein 2-A13; Swiss-Prot: sp|Q9LEX0|P2A13_ARATH F-box protein PP2-A13; TrEMBL-Plants: tr|I3S6B1|I3S6B1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0148800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:53512440..53518903) extracted from Lotus japonicus Gifu genome v1.2.
ACAAAAGCCACATATTATATTCCATTATATTCAATGCACACTCATGTACACGTCCACTTTAATTACAAATTCTTTTTCTG ATCTGGAACATAGAAAAAACACGCACCTAAAGAAATTTCCTTTTATACCTTTTTTTCCCACAGGATTCCCACCACTTGTG TCTTTCTTAAAAGCCAAAACCCAATGATGTTTGTGCCACAACAACCAACTCTATCAGTTTCTCCTATAGTTCTATACCTC TGAACCAAAAACCCTTTTCACCTCAGATTCATTCAAAACTTGTATTATCCATCATTCAATTCTGTTTTTATTTATGGGGG CTGGTATTTCTTCAACTGCATCAGAAAATGATGATTGTTGGGGCTCTCTTTCTCTGCCATCAAAGACTGGTCTTGATGAT GTGCCAGAAAACTGCATCTCTTCCCTGCTGATGAGTCTTGATCCACAAGAGATTTGTAAGTTGGCCAGAGTCAACAAAGC TTTTCATAGAGCTTCCTCTGCTGACTTTCTTTGGGAATCAAAGTTGCCCCCAGGCTACAAATTTCTTGTTAATAAAGTTT TGGGGGAAGAAAAACTTGGTTCCATGACCAAGAAAGAGATCTATGCCAAACTATGCCAACCCAATTTCTTTGACGGTGGT GCCAAAGTGAGTTACTCAATCTTCTTAATTTTAGCTGTGTGATTTGGGATCAAAGATATTCTATCTCCAAATGATGTATC AATTTCGGGTTATCACATCAATAAAACCTTTTAATGTTAAATAGAAAATAAACGAGTCAGATCGCTACAAATTTACATAT GTGATGGTACTTAATTGATTATATGCCAAGATTTTATTGGAAAATTGATGAGGCAAAATATTATTTTTCCTTTTCTATTT TTCCCTTCATTTCCCTTTCTCTTTTATTAAATTTGACAAGTTTTGATTTGTTGCTTTTCTGGTGATAAAAATAGGAAATT TGGCTGGACAGATGCAGTGCACAAGTTTGTTTGCTCATTTCACCAAGGTCTTTGAAGATAACAGGAATAGATGATAGAAG ATACTGGAATTATATTCCGACTGAGGAATCAAGGTGAGAGAGAGCAAAAAATTTTTTCCCTTGACATTTCCCACCTTGAT CTTTATATATTGAACTTGAACCTGGTTGATTAATATATTGTTAACTGAATTAGCATCAAGATATATGATGACTAAAAAAT AAAGTTTTGAATGATTTCCCTCATCAAAGTTGAATAATATGTTTGATTACATTAAATGTCCAAAATTCCAAGTTCTAGAA ATAAAAATAGAAACAAATCCGAAACGTCGGAATTGTAAATTATATATCATAATGATATTTTAGGAATAGAAAGGTTTAAT TGGAGTGTAAATAGGGAAAAAATCTGTAGAGAATGAGATTGTTTGAAGAGAAAAATGTCAATCCAATTTCTTTGATTTTC TCATTTTCTGATTTGATTCAATCCAATATAAATTTCAACCCCATCAAACCCATATTAATTGTTTTGGTTGAGGCAAATTT CAGTTTTATTCCTAGTTTATTTTCCTTTAAGATTTTGTTTGGAATTTTTTGAGAGAAGGGAGTGAGAAGACTTTAAGGGG AAAGGAAGGAAGCGGAGGGAAGAGTGGGGACTGGGGGTAAGAGCGGCAAAGTCCTCTCTTAATTTGGAAGTATAAAATTC CGCAAAATTTGATGGAGCTTACCAAATTACCAATGGAGGGTCTTAGAGGAGAAATCTCCAAACCCTTTCCTCATTCTAAA AAACCTCTCTAAGAAGAGCATTTCTTCTCACAAGCCTTCCCTTTTCCTTTCACTTCCCTCCCTTCCAAAGCCTAAGGGTG TGTTTGTGAGGTTTTAGGGGAGGGGGGACAAGTGGGGAAGAAGGGGTAATCTTTTTCCTGTTTGCAAGTTTCAAATTCCT CTAAGACTAAGAGTATGTTTGAGGGAAAGGGGAGGGGAGGGCAAGTGAGAGGGAAGGAGGTAAACTCTTTCCTTGTTTGC AATTTCAAATTTTTCTAAACCTTAAAGTTTGCGAAAACTCCACAAAACAACTAAATGAGTGTCCTGGAAGGGGTTTTCAA GGATTTTTAAAAATACCCCCAAGCACTTTCCCCTTTTTAAAATCTCTCAAATAAGGGGAGAATTCTCATAAGCCTCCCCC ATCTAAAACTCTTCTCAGAAACAATCCTAAAGGGAGTACTAAATAAATTACCTTTTATTAATAAATATAGTAAAAAAATA ATTCAAAATGTCAAGGAACAAAAGTGCAATAAATAATTGAAATTTTCTGGTTTTTTTCACTTGTTAAATATTCAGTTTTT ATTTAAATAAAAATATTGAATGAGTTGATAAATACTCATAAGCAAGGAACAAAAGTGCAAGCAATTTGCACTTGCAAATG TTAAATAATAGCTGAAAACGACTTCTATTCAAGGAAAGCAATCTATTAATCTATTAATTTTATCAAAAGACAACTCTTCC TAGTCAGCATCCTCATCTTGTAGAAAATTAAACAAACAAGGAAAAGGGCAAGCAAGTTGCACTATACAAATGCTGAAAAT GACATATTCTATTCAAGGGTTAACTATCAGATTGGTCCCTGTCTTTGTCTCGCCGTCTGAGGTAAGTCCCTCCCCGGAAA ATTTATTGTAAATGATCCTCGTGTTTGAAAAACTTTTGGAGCGAATCCTCGCCGGAGGGCGGAGCTCCGGCGAGTGCTTA AATGGCATGCTGACTGTGTTAAGTCAGCTGATGTGGATCTTAAAAAAAATTAAAAAATTAAAAATAAATACCAAGTCAGA ATATTGGACCAAATTAACAAAAATAATCCTAAATTAATTAACAAAATCAATTCATTCCTAATTAATTTCAATTCCCCAAA TTAACCCAACTTTCCAATCATTCCAATCAAATTGGGTTCATATTCTGCAACCCAAATCCTCTTCTCCTCCTCAAATTAGG GTTCTATCCACCAAACACGACCACCAACCCCAACAGCCACCACCATCCAGATCATGTTCTTCTTCTCCATCCTCTCTTCT TCTTCACCATCACCACTGGAACGTAGCAGAAGCACACACACCGGAACGACCCACTGGATCCGAATCTGAGTGCGCAGAGG ACGAAGGAAGAAAATGAGAGGGAGAGGCTGGGTGCGACGCTCGCATCCTCGCGGCTTAGATCGCCACCGCCAACGGCGAC GAAGATGACGGTGATGATTAACATCGTGAACGACGACGGCGGCGAAGATCTCTTCCTCTTTCACCGACGGCGACGAAGAT CTCTTCATGTCCTCTTGATTTCTTCATCTCCTGTCGATTTCTTCCTGCTCGCACCGTGACAGAGTCATCAACCTCTTTCT CTGCCTTCGATTCTCAGCAACACCAAGGGGGATTTGCAGGTTTGGGTTACAGATTAGTGGTAGTTGGGGGGTTTGGTTGG ATATGGGGGAGGGTGGATCCGTGGTGGTTGTTTGGGCTAGGTTCGAAGGTGGTTTTGTTTGGATTCGAAGGTGACTTTGT TTGGGTGGTTGTTTGGATTCACAGCAACACCAAGGTACGGTTTTTGTTCAAATCTTGGTTTGAAGATGGTTTTTGTTGCT GAGTCTGGATTCTTGGCCACCAAAGCACTTCTGGGTTCTCCTGGGTTTTTCTGGATAATAATCTTACAGTAGCCCTTTAC AGCAACACCATGACTGGAAGATTATGATCCAAAATTCCGTCGGTGTAGTAATCTTGCTGATTTTTGTTTGGCTTCTCCCA AGAGTCCAAGACAGATTCTGTTTTTGGAACGAAACATGACAGAATTGTTGGTGCAAACAATGTGCCCTTACGTGTAGGTT GCTTTGACAACAAATCGGTGTTCATCTCTTGTTACAGTCACACTTTACCTTTCATGTTAGATTTTCTTTTTACCCCTTGT TGGGTTTCATTCTAAGCTACTTCTGGGTTCTCCTGGGTTTCTTTTTCCTGTTTTCTGGATTTTAATTATATCTTGACTCT GGTTATGATGATGAAGACCATGGGAAATTAGATATGGTATTTTTGGGATTTTAATTTGTTTATTGTTGGGGTTATAATTT TTTGAAGATGATGAAGAAAATGAAGATGAGATCAATGTGAAAACATTTAACGAAGAACATGATGTTGAAGAAGATTCATG CTGATGAAGATGAATTTATATTTTTTTAATTGAATTTAGATTAAAATATTTTTTTATTTTTGTTAAATAATTAAAATTTC TGACTTGTTATTTTTTTTAATTTTTTTAAAATCCACGTCAGCTGACTTAACACAGTCAGCATGTCATTTAAGCACTCGCC GGAGCTCCGTCCTCCGGTGAGGATCCGCTCCAAAAGTTTTTCAAACACGAGGACCATTTACAATAAATTTTCCGGGGAGG GACTTACCTCAGACGGCGAGACAAAGACAGGGACCAATCTGATAGTTAACCCTCTATTCAATGAAAAGTAATCTTAATTA ACAAAAAAGCACCTTTACTTATTTGGTTGTTAAGTACTTTACCTTATAAAATGTTATGGGTTCTTATTCCCATTCGGTTC TAATGATTAGTGCTTTACACTAAAAAAGCCATGAGAATTTCTAACTATATATTCATATTCTCATAGAATTGTTATTGACA TGCAGGTTCAATAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTACTAGGGGAGCTAGATTTTGAATTTCCCAA AGGGAACTATAGCATATATTTTAGGCTCCAATTGGGGAAAACTTCAAAGAGATTGGGGCGGCGCGTGTGCAACCTTGACC AGGTTCATGGCTGGGACATCAAGCCCGTTAGATTTCAGCTATCTACATCCGACGGCCAGAGTTCATTGTCCCAGTCTTAT TTGCGTGGGCCTGGAGAATGGGCTTTCTACCATGTTGGAGACTTTGCCATTGAGAGGCCCAATGTGTCCACAAACATCAA GTTTTCTTTGGCTCAAATTGATTGCACTCACACCAAAGGTGGTCTCTGCATTGATGGGGCAGTGATTTGTCCAACAGGGT CAATTGACAAATTGAAACAATTTTAGCTAAGGATAGTTCACACTGTGTTTTCAGTTAAGCACTGTTGTGTGAGATAGAGA AAGTAGGTCTTTTTTAATCATTTCTTTTTTTTATTACTATTATTATTTAATTTTATCAGATTTTGCATAATGTGAATAGT TGAGTGATGAGTTTGAAAAGCACAAAGAGTGTTGGATTTTGAGACCAGACAATCTCTGGACAAGATTTAATTGCTTGTAT ATATGGTGAATCTTGTGTTGGGTATCTTACGTATTCTCTTGCTAATTTTTGTGACAAGAGTTCAATTGTGTGTTTGGTTC AGTGGACGCCGGACGGTATGAATTATAGTTGGGGGAAAATGAGAGGTATTAATTATATGCTTGGTGTGATCCACGAGAGG GAAGGTGAGAGAAAATATCAATTTTGCTTGTTTGGCTTAGAAGGATGTGAGATATGGGGTTCATTTACTGTACAAAAGCT TTTTTTTTGGCATGGTTGCACAAACCTAATTTTACATGCTATTGTAGGTTCAGCAGGTCTTTATTTTTTTACACTTTTAA CCCATATTTATTATAAATGCTACTTTGACCCATATCTATTATCATTTCTATAATGGCCACCGGAAATTCATCACTTCCTC AAAAATTCATCCCCTCCCCAGAAAGATATTCATCTCTCCCCCATAAATTTCCCCAGAAAATCATTCAAACCAGAGCATCA TATTTCAACCAGAAATTCATCCCTTCTACCCTCACCCCTTCCCCATAATCCCCATAAATTCATCTAAACTCAACCCAAAC CCAAACTCAGAAATACATCAACCCAAACAACATACCCAGCAACCCAACCCCCTCTCCGCCCTTCTCTCCCTCTCAATCTC CCTCCACGCCTCCCACAGCCAACCATAGCAGAGACTAAAACCACAACCCAACCCCTTTTCATAAGTGGAAACTGTCATAG TTCCGGCGGGATCGGCGAGCTTCATCATTCTTCTCCTTCCCCTTCGTCGTTTTCTTCCTCCGGTTCTCCCCTAGCTACCA GCGTCTGCATCCACTGTAACAACCACCGTCGAACACATAGAGATGCTTCAGATCTGGGCTTTTGGGTTTGGTAATTTGGG GTTTTGGTACCGGCATGAGGTCAGGTAAATTGTCAGAAAGAAAGAAAGGGGCTGGGTTGGGTGGTGGTAATTTGGGGTTT TGGTACCGGCATGATTGAATGCTTTTATTCTAATTTGTTTTGGATGCTTTTTTTCATTGTTGAGATGGAGATCATGAACG GTGGTGGAGATGGAGAATAGACGGATAGAATAAATTGGAATAAAAAAATCATTTCATTGTAAATGTGGATTTGAAATATT GTTTGGGATCATACTAGAATTAAAAATATATGTGGGCCAATAGTGTGAAAAGAAAGTAACATGC
CDS sequence (LotjaGi2g1v0148800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGCTGGTATTTCTTCAACTGCATCAGAAAATGATGATTGTTGGGGCTCTCTTTCTCTGCCATCAAAGACTGGTCT TGATGATGTGCCAGAAAACTGCATCTCTTCCCTGCTGATGAGTCTTGATCCACAAGAGATTTGTAAGTTGGCCAGAGTCA ACAAAGCTTTTCATAGAGCTTCCTCTGCTGACTTTCTTTGGGAATCAAAGTTGCCCCCAGGCTACAAATTTCTTGTTAAT AAAGTTTTGGGGGAAGAAAAACTTGGTTCCATGACCAAGAAAGAGATCTATGCCAAACTATGCCAACCCAATTTCTTTGA CGGTGGTGCCAAAGAAATTTGGCTGGACAGATGCAGTGCACAAGTTTGTTTGCTCATTTCACCAAGGTCTTTGAAGATAA CAGGAATAGATGATAGAAGATACTGGAATTATATTCCGACTGAGGAATCAAGGTTCAATAGTGTTGCATATCTTCAACAA ATGTGGTGGGTTGAAGTACTAGGGGAGCTAGATTTTGAATTTCCCAAAGGGAACTATAGCATATATTTTAGGCTCCAATT GGGGAAAACTTCAAAGAGATTGGGGCGGCGCGTGTGCAACCTTGACCAGGTTCATGGCTGGGACATCAAGCCCGTTAGAT TTCAGCTATCTACATCCGACGGCCAGAGTTCATTGTCCCAGTCTTATTTGCGTGGGCCTGGAGAATGGGCTTTCTACCAT GTTGGAGACTTTGCCATTGAGAGGCCCAATGTGTCCACAAACATCAAGTTTTCTTTGGCTCAAATTGATTGCACTCACAC CAAAGGTGGTCTCTGCATTGATGGGGCAGTGATTTGTCCAACAGGGTCAATTGACAAATTGAAACAATTTTAG
Protein sequence (LotjaGi2g1v0148800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGAGISSTASENDDCWGSLSLPSKTGLDDVPENCISSLLMSLDPQEICKLARVNKAFHRASSADFLWESKLPPGYKFLVN KVLGEEKLGSMTKKEIYAKLCQPNFFDGGAKEIWLDRCSAQVCLLISPRSLKITGIDDRRYWNYIPTEESRFNSVAYLQQ MWWVEVLGELDFEFPKGNYSIYFRLQLGKTSKRLGRRVCNLDQVHGWDIKPVRFQLSTSDGQSSLSQSYLRGPGEWAFYH VGDFAIERPNVSTNIKFSLAQIDCTHTKGGLCIDGAVICPTGSIDKLKQF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 290 | 290 | 1.5E-176 | – | |
| PANTHER | 1 | 290 | 290 | 1.5E-176 | – | |
| SUPERFAMILY | 22 | 86 | 65 | 1.59E-9 | ||
| ProSiteProfiles | 24 | 70 | 47 | 9.603 | ||
| Pfam | 122 | 280 | 159 | 7.9E-38 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0148800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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