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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0151300 |
| Transcript ID | LotjaGi2g1v0151300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF4378 domain protein; TAIR: AT5G62170.1 LOW protein: M-phase inducer phosphatase-like protein; Swiss-Prot: sp|Q9LF24|LNG1_ARATH Protein LONGIFOLIA 1; TrEMBL-Plants: tr|A0A0B2QSG6|A0A0B2QSG6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0151300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:54560010..54564988) extracted from Lotus japonicus Gifu genome v1.2.
TTTTACTAAAAAAATTCCGGCAAGAGATCTAGTTCAGACGACGAGACAAAGATATAAACTAATCTGATAGTTAACCCTAA AAACTATTGATAGTTAACCCTAAAAACTATTTTAGTTGAAAGTGTACCCCCATGTGACAATAGAATATCCGTTTCTCTCA AACAAAGAAGAGAATCATAGAACCTAGGAAAGGAGGTGCGTGGTCATATCGTCATCTCCCTTAATTCTTAATCCTTTAAC CCATCTCAGTTCCCAATATCAGAGCAGGGTTGAAATGGTTCTGGTCTTGGTCTGGTAAGAGCTTGGAAGTGAGTGCAATA AAGGTAAAAAGGTAAAGAATTTTTTTTTATTTAAAACAAGTAATTTTGAAATACTTTTTCCTTTTCTCCCAGATCAAAAA GTTAAAAGGATAATGTTTTATTGACATTTATTTTCCACGTAACTCTACCTTACCTAGAAAGAAAAATATGTAAAATGAGT TAAGAAAGAAACAGAAATGTGAATGAATTGTTATTCAAATATATATAAGATAGCGTTCCCATTTCTCAGCGTACTTAATT CCTTACACTGTTCCTCTTTTCTCGCTTCTTCACCTGTTTATCATCCCACAAAGTTCTTCTATCTTTTCTTGTCAAAACCT CTGACTCTTTGCACCTCACAAACACCCCCTGAGCTTTTCTGCATATAGAATCATTTTCACTCTGATTTCATCACTGGTCA GACAAGTGACAACCCTTTTTCCATATCATCTTTCTTCAGCAAATCCATAATCTTACCAATTATGGGCAAGGAGTGGCATT GGGCTGGGAAATCTTCTAAGAGAAATGGAGTAGAAGCTGAAGCTGCAGAAACAACACCTTCTGGTTGCATGTGTGCTGTC TTTCAGTTCTTTGATTTCCGTCCATTTCACTTCCCCACCTTAAACCAGCAACAACAACAACATCAACAAACCTCTTTCAA ATCACCCTCTTGCATCCCACAAGACAGTATAACTATCCCCAAAGGTATGTTTTTTCTTTCTTTCTATTAATCTACCTTCT GTTTCCCTCTTTCTCTTTCTCACAGCTTTGTTCATGGTTTTGTGCAATTCAGGAGCTGAAGCACCTAGAAATAGCTTAGA ATCAGTGGATGGAACAGTTTCCTCTCCCTCAAAAGAAGAAAATTTTAAAATCCCAGTAAGTACTAACCTGCCACACTTCC CAAAAGTTTTAATGAGCTTGACCCACTTCTGGTTGGGTTTGTTTATGCTGTAAAGTGAGTAATGATAATAGTGTACTATA GAAATAATGATTCTGTTTTCTGACCACTTAAATATTTTGAATATCCAGAAGAATATACAAATCAAAACAAGGGGCAGCAC AGTAGCAAATGCTGGAAATTTGAATGATTTATCCTCTCCAGGGGCAAAGACACCAACTTTGGTTGCAAGATTAATGGGTT TGGAACTTCTACCTGGTTTAAACTCACCCACTTCTTCTTCATGCCTTTCCACTCCAAACTCACAGGGCAATGTTCCTCAT ATGCATCACCTGAAACTTCACAAACACATCCAAACCAAACCAAGAAACAGCACAGAATACAGTGGTGATCATCACATTGC AGCATCTCGCTCCTTGCCTGAGACACCAAGAATCTCCTCTGCCAGAAGATCAGATGTTGACCATCACAGACTCTCTCTCC AAATAATCAAGGAGAAAAGCATGATGAGCCTTGGTGAGGATTTGGAGTTGCCTCGGCTTTCGTTAACGAAGAAGAAACGT GATGAGAACAATAGCAGAAGTCCAAGCCAGTCTGCTCGGCAAATTGTCAAACAGGTTAAGGACAGTTTGAGCAGAAAAGT TGGGCAAGACATTACCAACACTCTCAAAACTAGAGATCAAGAATTGGTAACCCAATTGAGAATCAAGAAGTCTTCAAAGT CACCATCATTGAAAACACTTGATGAATCAAGCCCAGGAAAACAATCAAACTCATCACATTCCCCAAGGCTCAGATTCATG GACACCAAGCACAAGCCAAGCACAACAACAACACCATCACCACACACCACAAAAGATCAAAACACAAACCAACCAGTGCT GAAACTACCACCAGAGCTTCCAAGAGTTTTGACAAAGCCAAAGCATCAAGCATTTCCAGAGCAACAAGAGTTGCACAACC AGAAAGTTTCTGTTCCAAAATGTAAGAAGGTGACTAGTGAAAAGTTCAGCTCCAGGTTCAAAAGGCCTCCACAGACAACA GACATAATCAGAAACAAGCACGAAGAGCCATTCAAGTTTAGTCCAACATCACCTATCAGAGCAAATGACATCAAAAATAC CAAAAGCAAGAAAACTCATCCATTGTCAAGTAATCTCCTTAATAACATCATCAACACTGTTCCAAATGTTCTCTCTGTCA AGACAGAGCCTTCTCCTCCAGCAACTAAAATTGCTCAAAAACAGGTACCCTCCCATTGAACTTTCATTTTTCAACTATTT GAATTTTATAAATGCATATATTATTAGGATCTTAATAAAATGTTTTCTCTTGGGTCCTAAAATAGTTAAGTAATTAAGAA AACTTATTAAAAATGGACATTACTATATCATGGTTTTTGTCTACCTTTAAGTAGAGTTTTTGGTTTTAGGACAATTATCA CTCAAAACAAATTTTCTGATATTTACCCTTATGGAATGAGATTCTTTATGAAGTAGTTTAAAAACTAAAAATAGAAAAAG AAATCATGATATGTTTTGAAATTTAGTTTCAAACGTGAATAAGAACTAATTGTAAAAACATTTTTTCTTAGAAAAATAGG TATAAAAACCAAGTTTTATAATAGTATTTCATTTGAAAAAAAACAGAAAATAGATTTTTAAAACCACAAACAAACATGCC CATATATACTTTTAATCTATTGTTTACTAACTTATTCTCTATATTGTGTTTAATAACCACATTTTATGTGGATCAGCACT TTTTAAATTTAAGCATTGGGATTGTTTGATTTTTGTTTTACTTTTTTAAATTAAAAAAAAACTTAAAATAGTTTTTGTAA GAAAAAAACTAAACACAATTTTTTTATTGAAAACAATTTTTGAAAATCGATTATGACAAACAAAACTTCTTCCGATTTTA TAAACAAAAAAACAAATAGTTACATGATACATCTCATTTTTCTCTGTTTCTCTTCATATCACGTTACAACTTCCCTCCAA CATTTTCCTTTTCTTTTCTAATGCATACCAAACAAGTGAAAAGTATTTTACTATATATTTTATCATTTATTTATCTTCAC CAAGCTTTTCACCACTATAGTAATTTAAACAGTCAGTTTTTCTGTCTTTAACCATACTCCCCTCTCTTCCTAAATATAAG ACCTATTCTAAAAAATTGCGCTTATTAAGAAAGCACTTAATGTGTATAATTAGAGTATTGGTTTTCTAAAAATGCATGCA TTATTCCTTATTTATCCTTTGTTCTTTTCTCTCACAAAAAATCTTTGCATTTATACCAAAAGTCATAGTTAGTTGGATTA GTAGTAATTAATGGTAGATGATATTTTGGAATTGAAAACATACAATTAATGTGACGGGTAAATATGGAAGAGCACAAAAC CTTTTGCTAGATTATTGTAAGAGGTCTTATATTTAGGAACATGAAAATTTTGAAACTAGTTCTTATAATTAGGAACGGAG GGGAGGGAGTCTTATTTTACTACTGTAATTGCCAAAAGTATTACTAACAAATTACACCGTCACAATCTCAGGTATCTGAT GCCAAAGAGTCCAAACACAGCTCACAATTATCTAGTTGTGCGCGCCAGAGGTACAAACAAGAAGGAACAATAAATACAGA GTCTACCGCCACCAGAGAAACAACCACCAACAATGAAGACAAACCCAACTGTGCTTCCACCACCACCGCAGCTCAAGAAT ATCAAAACCCAGAATTTCAGTACATCACACAAATCCTAAACCGTACAATAAATACAGAAGCTACCACCAACACCACAAAA CTAGTGCCACTTGACCCATCAATCTTCCACCACCTGGAAAGCCAGTGTGACAATAAACATCGCAACATTACCCCAAAAAA CCAACTGGGTCATCGTTGGAACCGAAGATTACTGTTCGATCTGGTAGATGAAGTTCTGGAGGAGATTCTGATGCCTAAAG GGTGTGCAAAAAAGCTCTGGTTATTCTACAGAAGCAAGAGTGTGGGAGAGTTGACAGAGAGAGTGTGGAAGAGGGTTGAG GACTTCCCACGTGCGAGGTGTGAGGTTTTAGAAGACATTGATGCGTTGATAGAAGCAAAGGACATGGAGAAAGTGAAGAT GGAAGGTGAAGAAGAAGGAGAAAGGATGGTGACAGAAATCGAAGGGAACATATGGGACACGTTGGTGCATGAAACGGTTA TGATGATGGAAAGTGGTGGGGTTCAACACCGTGACGGCGTCGTTTTGTGACGGGTGGTGGTGGTTGGTGGGGACCACTAT GACATAGGGTTGTGGGTTTGAACGTCCTTCGATTGTAGGGTAGGGTCATAAGAGAGGGGAATTTGACCCCTCCTCGACAG GAACAAGACTGTGCAGCTGATTGGTTATTAAAAGACAATATTCGTCAGGGGAATCCACGCCCCACTTTCAGTCCTTCCTT ATCTCTCACTATTCAATTCATGCATGTTGAATGACAAGGGCCAAGGGGTGTAAAGAGGCGAGCTTCTCCATTCACCTGTC TTCCCGGTCCAACTTCATTCAACACAACTCATTCAACTTTTTGAGTTTGTGAACGTGTTCGAGTTTAAAGATTGTGTGAA AGACAAACATAACTCTCGTGTCATAAACATTTTTATTAAAAATGCATTTTATTGTATAGTCGGATTTAAACATTAAACAT TGTACCTTGCAGTATTTAGTACAAACAATTTATTATATGCGCTTTTTTATCATTAATTGAAAGATTGGAAATAAGTGTTT TTCTTAATGAGAAGTAGTG
CDS sequence (LotjaGi2g1v0151300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAAGGAGTGGCATTGGGCTGGGAAATCTTCTAAGAGAAATGGAGTAGAAGCTGAAGCTGCAGAAACAACACCTTC TGGTTGCATGTGTGCTGTCTTTCAGTTCTTTGATTTCCGTCCATTTCACTTCCCCACCTTAAACCAGCAACAACAACAAC ATCAACAAACCTCTTTCAAATCACCCTCTTGCATCCCACAAGACAGTATAACTATCCCCAAAGGAGCTGAAGCACCTAGA AATAGCTTAGAATCAGTGGATGGAACAGTTTCCTCTCCCTCAAAAGAAGAAAATTTTAAAATCCCAAAGAATATACAAAT CAAAACAAGGGGCAGCACAGTAGCAAATGCTGGAAATTTGAATGATTTATCCTCTCCAGGGGCAAAGACACCAACTTTGG TTGCAAGATTAATGGGTTTGGAACTTCTACCTGGTTTAAACTCACCCACTTCTTCTTCATGCCTTTCCACTCCAAACTCA CAGGGCAATGTTCCTCATATGCATCACCTGAAACTTCACAAACACATCCAAACCAAACCAAGAAACAGCACAGAATACAG TGGTGATCATCACATTGCAGCATCTCGCTCCTTGCCTGAGACACCAAGAATCTCCTCTGCCAGAAGATCAGATGTTGACC ATCACAGACTCTCTCTCCAAATAATCAAGGAGAAAAGCATGATGAGCCTTGGTGAGGATTTGGAGTTGCCTCGGCTTTCG TTAACGAAGAAGAAACGTGATGAGAACAATAGCAGAAGTCCAAGCCAGTCTGCTCGGCAAATTGTCAAACAGGTTAAGGA CAGTTTGAGCAGAAAAGTTGGGCAAGACATTACCAACACTCTCAAAACTAGAGATCAAGAATTGGTAACCCAATTGAGAA TCAAGAAGTCTTCAAAGTCACCATCATTGAAAACACTTGATGAATCAAGCCCAGGAAAACAATCAAACTCATCACATTCC CCAAGGCTCAGATTCATGGACACCAAGCACAAGCCAAGCACAACAACAACACCATCACCACACACCACAAAAGATCAAAA CACAAACCAACCAGTGCTGAAACTACCACCAGAGCTTCCAAGAGTTTTGACAAAGCCAAAGCATCAAGCATTTCCAGAGC AACAAGAGTTGCACAACCAGAAAGTTTCTGTTCCAAAATGTAAGAAGGTGACTAGTGAAAAGTTCAGCTCCAGGTTCAAA AGGCCTCCACAGACAACAGACATAATCAGAAACAAGCACGAAGAGCCATTCAAGTTTAGTCCAACATCACCTATCAGAGC AAATGACATCAAAAATACCAAAAGCAAGAAAACTCATCCATTGTCAAGTAATCTCCTTAATAACATCATCAACACTGTTC CAAATGTTCTCTCTGTCAAGACAGAGCCTTCTCCTCCAGCAACTAAAATTGCTCAAAAACAGGTATCTGATGCCAAAGAG TCCAAACACAGCTCACAATTATCTAGTTGTGCGCGCCAGAGGTACAAACAAGAAGGAACAATAAATACAGAGTCTACCGC CACCAGAGAAACAACCACCAACAATGAAGACAAACCCAACTGTGCTTCCACCACCACCGCAGCTCAAGAATATCAAAACC CAGAATTTCAGTACATCACACAAATCCTAAACCGTACAATAAATACAGAAGCTACCACCAACACCACAAAACTAGTGCCA CTTGACCCATCAATCTTCCACCACCTGGAAAGCCAGTGTGACAATAAACATCGCAACATTACCCCAAAAAACCAACTGGG TCATCGTTGGAACCGAAGATTACTGTTCGATCTGGTAGATGAAGTTCTGGAGGAGATTCTGATGCCTAAAGGGTGTGCAA AAAAGCTCTGGTTATTCTACAGAAGCAAGAGTGTGGGAGAGTTGACAGAGAGAGTGTGGAAGAGGGTTGAGGACTTCCCA CGTGCGAGGTGTGAGGTTTTAGAAGACATTGATGCGTTGATAGAAGCAAAGGACATGGAGAAAGTGAAGATGGAAGGTGA AGAAGAAGGAGAAAGGATGGTGACAGAAATCGAAGGGAACATATGGGACACGTTGGTGCATGAAACGGTTATGATGATGG AAAGTGGTGGGGTTCAACACCGTGACGGCGTCGTTTTGTGA
Protein sequence (LotjaGi2g1v0151300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKEWHWAGKSSKRNGVEAEAAETTPSGCMCAVFQFFDFRPFHFPTLNQQQQQHQQTSFKSPSCIPQDSITIPKGAEAPR NSLESVDGTVSSPSKEENFKIPKNIQIKTRGSTVANAGNLNDLSSPGAKTPTLVARLMGLELLPGLNSPTSSSCLSTPNS QGNVPHMHHLKLHKHIQTKPRNSTEYSGDHHIAASRSLPETPRISSARRSDVDHHRLSLQIIKEKSMMSLGEDLELPRLS LTKKKRDENNSRSPSQSARQIVKQVKDSLSRKVGQDITNTLKTRDQELVTQLRIKKSSKSPSLKTLDESSPGKQSNSSHS PRLRFMDTKHKPSTTTTPSPHTTKDQNTNQPVLKLPPELPRVLTKPKHQAFPEQQELHNQKVSVPKCKKVTSEKFSSRFK RPPQTTDIIRNKHEEPFKFSPTSPIRANDIKNTKSKKTHPLSSNLLNNIINTVPNVLSVKTEPSPPATKIAQKQVSDAKE SKHSSQLSSCARQRYKQEGTINTESTATRETTTNNEDKPNCASTTTAAQEYQNPEFQYITQILNRTINTEATTNTTKLVP LDPSIFHHLESQCDNKHRNITPKNQLGHRWNRRLLFDLVDEVLEEILMPKGCAKKLWLFYRSKSVGELTERVWKRVEDFP RARCEVLEDIDALIEAKDMEKVKMEGEEEGERMVTEIEGNIWDTLVHETVMMMESGGVQHRDGVVL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 699 | 699 | 3.3E-203 | – | |
| PANTHER | 1 | 699 | 699 | 3.3E-203 | – | |
| MobiDBLite | 48 | 68 | 21 | - | – | |
| MobiDBLite | 48 | 97 | 50 | - | – | |
| Pfam | 122 | 144 | 23 | 9.8E-9 | ||
| MobiDBLite | 179 | 214 | 36 | - | – | |
| MobiDBLite | 241 | 269 | 29 | - | – | |
| MobiDBLite | 292 | 322 | 31 | - | – | |
| MobiDBLite | 292 | 354 | 63 | - | – | |
| MobiDBLite | 330 | 353 | 24 | - | – | |
| MobiDBLite | 416 | 439 | 24 | - | – | |
| MobiDBLite | 462 | 522 | 61 | - | – | |
| MobiDBLite | 481 | 522 | 42 | - | – | |
| Pfam | 535 | 688 | 154 | 6.2E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0151300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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