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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0152500 |
| Transcript ID | LotjaGi2g1v0152500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | alpha/beta-Hydrolases superfamily protein; TAIR: AT5G62180.1 carboxyesterase 20; Swiss-Prot: sp|Q0ZPV7|CXE1_ACTER Carboxylesterase 1; TrEMBL-Plants: tr|A0A072UAU3|A0A072UAU3_MEDTR Gibberellin receptor GID1, putative; Found in the gene: LotjaGi2g1v0152500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:54920038..54922532) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTTATTACGAATTTATATGTATATATTGTCTCCACTACATTAAATTTCTGGTACATTAAATTTATGGATCCGTGGGT GCTTAATTACTCTATATAATCTAGAGCTGGCCTGGTGCACAAACTGTATTCCATCACAAGACGTTGAACTTCTTCACTGC AATAATCAAACTCAAACAAACCTTTCTCCTTCACCATGTCCAACCAATTAACATGCCCAAAATCTCAAACCATCGACCCC TACCAGAACATGAATCTGGTTGTGAACTCCGACGGCACGCTATCTCGCTTATTTGAAGATCCACTCATCTTACCTTCATC AGACGCCACTCTTTCAGTTCTCACCAAAGATATCCCAATCAACCCATCAAACAACACCTGGCTTCGTTTATTCTTACCTC GAAACGCAACCCTTAATCACAACCAACAACAAAAGCTTCCCCTCATTCTTTTCTTCCATGCCGGTGGCTTCATTGTGCTC AGTGCTGCTTCCACCTTGTTCCACAGCTTCTTAGTGGAAATGGCGGAAACTGTCCAAGCCATCGTTGCCTCCGTCGAATA CCGCCTCGCGCCGGAGCACCGGTTACCAGCCGCGTATGACGACGCCATGGAAGCGCTGCACTGCATCAGAACCAGCAAAG ATGAGTGGCTGACAAAATATGCTGATTACTCTAATTGTTACCTGATGGGAAGCAGCGCTGGGGGAAATATCGCATACCAT GTAGGTCTACGTGCTTCAGCGGAGGTGAATGATCTTGAGCCGTTGAAGATTCAAGGGTTGATATTGCGGCAACCATTCTT TGGTGGGACCAAGAGGACTGACTCAGAGTTGAAGTATGAGAATAACCATGTTATCCCCTTAACTTTTACTGATCTCATGT GGGAGCTTGCATTGCCAATTGGTGCTAATCGTGATCATGAGTATGCTAATCTGACAGCTGGGGTTGGTTTTGATGAGAAG CTGGATAAGATAAGGGAACTTGGGTGGAGGGTATTGGTGAGTGGGACCGGTGAGGATCCTCTGGTGGATCGTGAGAAGGA GTTGGTGATGTTAATGGAAGAGAAGGGTGTGCATGTGGTTAAGGATTTTCTGGAAGAAGGTTATCATGTGGTGGAGTATT TTGAGCCATCAAAAGCAGAGCATGTGATTAGCTCGGTGAAAGCTTTCATTTTCTCTTCGGGTCCATAAGATCAAGAGTAA TGTTTAAGGTTCCCACTAGGGTGGACCGGTGGACAACTTAAAAATTGGTCCACCGGTGCACCAAGGGCTATTTTTGTAAT TTATAATATATTAAAAATATAAAAAAATTCAGTCATCTTCCCTATTGATCTCTGCCTGAGCTTCAGACAATTCTCTTTCC TTATCTGCAACCACGCACACAGACACACACACCACCACAATCAACAACACGAAGAAAATCAAGTGCAAAACTCTTCAGAT CGAATCGTGCAGCAAGTTCATGAAACCGCCGCCTCAGGTTCATGACACTGCCTTCCTTAAACGATCCAGACACCGCCAAC GGCGCTGGAGTAGCCACCGTCGCCTCAAGTCCACCTCCGCCGGAACACTCCGCTATGGCCGATCTAACCGATGCCGCCAC AGCCCGCAGCCACTCACATCCAAATTCTCCTCCTACATCTGAAGATCCCAAATGCTCGTTGTGCATAAATCTGCCAGGTC GAGGGAGAAGGAAATGCGGTTTCGCGGCGTGAGGAGCGTCCCCTAGATCCCCATCTCCCATGGCTTCTCCAAGTTATGGA AAGAAAGCCCGCGTCTCCCAGATCCCCATCTCCCATGGCTTCCATCTTCCAGATCCCAATCTCCCATGGCTTCTCCACGT TCTGGAAAGATGAAGAGCATGGTGTACCAACTGAAGAGAAGATGGGTTACTGTGTGTGGGTGTGTATGAACTTTGATTTC ATATCCCAATCTTCCTTCTGTGTTACTGTGTGTGGGTGTGTATGAACTTTGATTTCACTGTTTAATTTGGGTTGAGCACT GATTTGGTTTCTCATAGTTGAAATCTTAATTGATTTGGCTCATTTCTAAGCTCTGCTACCACTGTGAATAACATGTAACA AGTTTGCTTCCTACAGGAAAAAATCACAATGAGGAGAAAGGAGATTGGGTTTGAGAATTTTGGAGGACAATTATACCCTT TATATAGAAATTCAATCTTGACCATTGATCTAAAGAATATTCTTATATTCCAAGATCTAACAGTTGTCAATGATGGTCCA CCAGTGGACCAAAATAAAAGTTGCCCACCCTAGTGGGCACCAATGTTTAATACACACCTCTCTTTTGAGGTGAGGTGGAG AGGTGGAATGGTGAGAGATAAGAAAAAAAGAAAAAGTAAGAGAGAAAATATGAGATGTGATAGATGATAAGATGAGAGAG ATAGAAATAAAAAGAGATAGAAATGGAGTGTTTAAAAAATGAGGTGTGTATATATTATTACTCTAATATCAATCATGTAT CAAAATCAAGTTGAG
CDS sequence (LotjaGi2g1v0152500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCAACCAATTAACATGCCCAAAATCTCAAACCATCGACCCCTACCAGAACATGAATCTGGTTGTGAACTCCGACGG CACGCTATCTCGCTTATTTGAAGATCCACTCATCTTACCTTCATCAGACGCCACTCTTTCAGTTCTCACCAAAGATATCC CAATCAACCCATCAAACAACACCTGGCTTCGTTTATTCTTACCTCGAAACGCAACCCTTAATCACAACCAACAACAAAAG CTTCCCCTCATTCTTTTCTTCCATGCCGGTGGCTTCATTGTGCTCAGTGCTGCTTCCACCTTGTTCCACAGCTTCTTAGT GGAAATGGCGGAAACTGTCCAAGCCATCGTTGCCTCCGTCGAATACCGCCTCGCGCCGGAGCACCGGTTACCAGCCGCGT ATGACGACGCCATGGAAGCGCTGCACTGCATCAGAACCAGCAAAGATGAGTGGCTGACAAAATATGCTGATTACTCTAAT TGTTACCTGATGGGAAGCAGCGCTGGGGGAAATATCGCATACCATGTAGGTCTACGTGCTTCAGCGGAGGTGAATGATCT TGAGCCGTTGAAGATTCAAGGGTTGATATTGCGGCAACCATTCTTTGGTGGGACCAAGAGGACTGACTCAGAGTTGAAGT ATGAGAATAACCATGTTATCCCCTTAACTTTTACTGATCTCATGTGGGAGCTTGCATTGCCAATTGGTGCTAATCGTGAT CATGAGTATGCTAATCTGACAGCTGGGGTTGGTTTTGATGAGAAGCTGGATAAGATAAGGGAACTTGGGTGGAGGGTATT GGTGAGTGGGACCGGTGAGGATCCTCTGGTGGATCGTGAGAAGGAGTTGGTGATGTTAATGGAAGAGAAGGGTGTGCATG TGGTTAAGGATTTTCTGGAAGAAGGTTATCATGTGGTGGAGTATTTTGAGCCATCAAAAGCAGAGCATGTGATTAGCTCG GTGAAAGCTTTCATTTTCTCTTCGGGTCCATAA
Protein sequence (LotjaGi2g1v0152500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNQLTCPKSQTIDPYQNMNLVVNSDGTLSRLFEDPLILPSSDATLSVLTKDIPINPSNNTWLRLFLPRNATLNHNQQQK LPLILFFHAGGFIVLSAASTLFHSFLVEMAETVQAIVASVEYRLAPEHRLPAAYDDAMEALHCIRTSKDEWLTKYADYSN CYLMGSSAGGNIAYHVGLRASAEVNDLEPLKIQGLILRQPFFGGTKRTDSELKYENNHVIPLTFTDLMWELALPIGANRD HEYANLTAGVGFDEKLDKIRELGWRVLVSGTGEDPLVDREKELVMLMEEKGVHVVKDFLEEGYHVVEYFEPSKAEHVISS VKAFIFSSGP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 82 | 82 | - | – | |
| PANTHER | 14 | 325 | 312 | 1.2E-139 | – | |
| PANTHER | 14 | 325 | 312 | 1.2E-139 | – | |
| Gene3D | 16 | 328 | 313 | 3.2E-75 | ||
| SUPERFAMILY | 44 | 325 | 282 | 1.33E-41 | ||
| Phobius | 83 | 106 | 24 | - | – | |
| TMHMM | 84 | 106 | 23 | - | – | |
| Pfam | 84 | 305 | 222 | 1.0E-43 | ||
| Phobius | 107 | 330 | 224 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi2g1v0152500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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