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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0154200 |
Transcript ID | LotjaGi2g1v0154200.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Cytochrome P450 family protein; TAIR: AT2G45510.1 cytochrome P450, family 704, subfamily A, polypeptide 2; Swiss-Prot: sp|Q50EK3|C04C1_PINTA Cytochrome P450 704C1; TrEMBL-Plants: tr|A0A0L9VJK6|A0A0L9VJK6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0154200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:55173314..55174558) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGTTGTTGCATTATATGTGCCATGTTTAGCCTCCATCCACGGCCAACATTATATTAACAATTTCATTGGTAAATCAA AAACCACTTTCTTCATTCTCTCTAGCCTAAACATCCTCATCTTCTTACTCACATTATGAAATTCTCATATTCTCCTTATG ATCCTATAACTGCAACTGCAACACTTGGAGCTATAGCTCTAATATTCTTTGTGATAAGAACCCATTTCAAAAGGTTCAAT CGAAGCAGCAAAGAAAAGCGCCATGTGGTTGCTGGGACTATCCTACATCAGTTGTTCAACTTCCACAGGATGCACGATTA CATGACAGATCTCGCCAGAAAGCACAAGACTTACCGGTTGCTTAACTTTCCCATGTGTGAGGTTTACACTGCAGACCCCG CCATCGTTGAATATATCCTCAAAACAAACTTTGCAAACTATGGGAAGGTACTCATCAAAATTACTTTTAGTAGATATTAA TAGTTGATGCCTATTCTAAAGCTTAGTTTCACTAGAGGGGTAATAATATGAAGTATGTGACCATAATTTACTTACTTCAG CATCATGATGACTTTTGATTTCAGCATGGAGGTACAAGGATGAACTAAATATGATGATGTTTTTCATTTGGCTTGTTGCT GAGAAATGATATGTAATTAGTACAGCAGAAGTATATTTGGAAATGATTGCAACTTTCATAGTCCAAGAATGGTAAGGAGA TCTTCACATTGGACACAACTTTTTTCATCCAAAACCTTAGGGAATTCGGTGCGTAGGTCCTCCCACATATAAAATGTTCA ACACTTTTTTCATTCAACGTGTACTCATTATTTAATTTGGATTCCCAACACACATTGCGCACATTCGAACACAAAATCGC ATATTCCTACGCAGTGAAAATGGAAGAAGAGGGAGAGGTTTGTTCGGTGAACTAACATTCACGCTGGGTTTGTAAACACA CATCAAGTTGGTGAAGGATGAGAGTGTCCAAGACTATATAAACTCAAATCATTTGTTATAAATGTACCAGCTTCACGAAA CACTTCAATTTTCTTTTGTTATGCTTTTGTGCTCTTATGCTCTTGTGCTAGAGTATTGTGAGATGGACTCAAATGTTTGT TTTGGAAAGTGTATGTGTAATGTTTTTTTATATAGAACGTTCCTAGTTTTTCTTTGATTTTAAATTTTTTTACATTATAT TCTTCTGTTGTGATTGTGTTCTTGCTTTTATTTCTCTATCGCGTG
CDS sequence (LotjaGi2g1v0154200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAATTCTCATATTCTCCTTATGATCCTATAACTGCAACTGCAACACTTGGAGCTATAGCTCTAATATTCTTTGTGAT AAGAACCCATTTCAAAAGGTTCAATCGAAGCAGCAAAGAAAAGCGCCATGTGGTTGCTGGGACTATCCTACATCAGTTGT TCAACTTCCACAGGATGCACGATTACATGACAGATCTCGCCAGAAAGCACAAGACTTACCGGTTGCTTAACTTTCCCATG TGTGAGGTTTACACTGCAGACCCCGCCATCGTTGAATATATCCTCAAAACAAACTTTGCAAACTATGGGAAGCATGGAGG TACAAGGATGAACTAA
Protein sequence (LotjaGi2g1v0154200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFSYSPYDPITATATLGAIALIFFVIRTHFKRFNRSSKEKRHVVAGTILHQLFNFHRMHDYMTDLARKHKTYRLLNFPM CEVYTADPAIVEYILKTNFANYGKHGGTRMN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 11 | 11 | - | – | |
TMHMM | 10 | 27 | 18 | - | – | |
Phobius | 12 | 31 | 20 | - | – | |
PANTHER | 21 | 105 | 85 | 6.5E-26 | – | |
PANTHER | 21 | 105 | 85 | 6.5E-26 | – | |
Phobius | 32 | 111 | 80 | - | – | |
SUPERFAMILY | 50 | 106 | 57 | 5.2E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
Molecular function | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. | ||
Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0154200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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