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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0154300 |
| Transcript ID | LotjaGi2g1v0154300.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|K7MIQ1|K7MIQ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0154300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:55183378..55186386) extracted from Lotus japonicus Gifu genome v1.2.
CTATAACATTCTATTCTTCATCCTCATTAGTTTTATGAGTTTTCCACCTACCAAAACAGAGGACAGTATTGCTATTTATC TACACAAAATCTGCTCCAACACCACCACAATCTCCAACAACAGCAGCTCCTTCCAATTTGATCTGAGAACCCTCCTCAAT TCACTGTCCTCTAAAGCCACCGGTGACACCCAATTCTCCAATGCCTCAGTCATTGGCAGCACAGACCCATCTGACTCCGT CTATGGACTCTTCATGTGCAGGGGTGACATCCCCTCTAAACTCTGTCAAAATTGCATCAGAGACGCAACCCTGCAACTCT TCTCAGAGTGCTCCTCATCCAAACAAGCATTGATTTGGTATGAGGAGTGCATGGTTCGCTTCTCCGATCGCAATTTCTTC TCGGCTGTGGAAACACAGCCGAGAATTAGCTTCTCAAACAGCCTTAACGTCTCAAACTCAGAAAGCTTCATGCATTTGGT GTTTGAGACCATGAATGCAACTGCAGATGCAGCGGCAGGTGGTGATGAGAAGAAGAAGTTTGCCACGAGGGAAGAAGTAA CTGTTTCGGAAAATCAGACTCTTTACTGTCTAGCTCAGTGTACGCCGGACTTGTCGCCGCGTGATTGCAGAACATGTCTC AGTAGGGCAATAGGGGAATTTGCTAAGTGCTGTGGAGGAAAGCAGGGAGGGAGAGTTATGTATCCTAGCTGCAATGTGAG GTTTGAATTGAACAAATTTTACAGGGATATTGGTGACAAAGCACAGAGTGCTTCTCCATTATCAGGATCTCCAGGTAAGT CTTGACTCTACTCAAGTATATATACCCTTTAACAGTTTATAGAATTTTACTAGTGAAAGTGATAAAAGTTAAAAGAAGTC CTAGATGAAAATGTAGGTTCTTGTGGAATTGGAACATCAATTGAATAACGGTTAAGATATGAAACAATTTCTACCATTAT AGGTCTATCATTAGGGTTATGTTGAACACATAATAAGCCAATCTGAATGCATTTGATGACTTCAATTTCAGAACAACTTT CTTTGATATGTTGGTCTACTACACTTAAAAGTGTTTGATCCTTCCATTGTCTCCAAACCTGTAATAATATATCAAGTAAA ATATTAAAATTATTACATTTCTTTCCATTTGTGACTTAATCTAAGTGTACAATAATTATATCACCCAAAAGAAATAATGC TAGGAAACTATTGATAAATCAGTATACTCACATAACTCAAGAGACCATTACCAACACGTTCTGATTCATAAGAATTTTGA TTCCTTTTCCCGGTAACAATCTCTAAAATCATGACACCAAAACTGAAAATATCTGATTTCTCTGAAAAGTGCCCAAACAT TGCATATTCTGGAGACATATAACCACTGTAAAACATAAGAAAAATCAAATGTAAGATGATTTATTTAAATAACCTTATGA AGAAGTTAGAAAAGAAAAGATAGAAATGACGTCTAAAACTTACAATGTTCCAACAATTCTATTTGTACTTCCTTGGTATT GATTTATTTCAACAATTCTAGCTAAGCCAAAATCTGAAATTTTTGGAATCATATTTTCATCTAATAAAACATTACTAGGT TTGAGATCACGATGTATGACTTTAAGCCGTGAATGCTCATGTAAATAAATGATTCCTCGAGCTATCCCTCCAATAATATT GTAACGTTCATCCCAGCTTAATGGACTTTGCCCTTGAGAACCTACAAAATCATTTTAGCAAAAAAATGTTTTCCAATAAG TCAACTCAAGTTCTATGAAAAGCATATATAAAGTACGCATACCTTTAAAATCTACTATGTAAAATGTTTAAGGTGAAACG TGTCAAACCGAATAAAAAGTAATCAAGGCTCTTGTTTAGCACATATTCATAAATGAGTATTTTCTCTTGTTCCTCAAGAC AAAAGCCTATGAATGCCACCAAATTTCTATGTTGAAGCTTCGCTATCAATAAAACTTCGTTCTTGAACTCATCGACACCT TGCTTCGAACTTTCTGAAAGTCTCTTTACTGCTATTTGTTGTCCATCAAGAAGAGTACCCTAAAAATATATAAAAAAAAT TATTTGTGACAAATGAAGTATGGAAATGAATTTTATCACATTTTCTCACCTTATAAACCTCTCCAAATCCACCTTTGCCA ATGTAATTGTCATGAGAAAAGTTGTTGGTTGCTGCTTCAATTACGGCAAAATCGAATTGCAATGGCTCTAAAGTTGCACT TTCATTACCAACTGAACCAAAATTGAATTGTACTTCTTGCACACTAGGATGGATCCAATTCCAAAAGAATCAAGTTCTAC TCCATCAGTGAATAATTCTATCAATGAAGTGTCTATAAGTACTTTTCTTCCCCGATAATAATTAGTTAATTATCCTTTGA AGTTTCGTTGTTGGGAGCAAGTGGTATGTATAACTCAATGGATTAAGGAAAAGACTAGTTGTAATTTTTAGTTTATATGA GGTTAGTTTGAAAGGAATACTTAAAGATCTTTATTGAGGACTATTCAATCCCACTCGATATATAATGAAGTGGAAACTCT TCTAATCAAGTTCTTTAACTTTCTTCATTTTAAAATTTGTGTGTGAGATCTATTAAGAAACTGAAGTTTTCTTTATATAC TAAGTTCTACTATGCTGATGATATATTGAAGAAATTCAGGAGGAACCGACAGGAGGAACCGAGGAAATATTTAAAGCCAG TTTTCACTCTAGTAGAAGAAACATTGAAGCTGATAAGAAAAAAATGACATCCTACGTACTAATGTTTGATTTGAAACCTA GATATTTGGTGGCTATAGCTTCATCTGAAGAAGCCAAGATTCTGAAGAACCCAACCTTCTGAAGAAATCAGAGTTTAAGA AAGCTACGCAGAAGAATCCAAATCCTGAGTAAATTGCATGCTCAAAGCAATCAGACACTGAAGACATTACATGCATGCTG AAGTAGTTAACCAAGCATAAATATCATATTTGCACTTTCTGTAACTTTT
CDS sequence (LotjaGi2g1v0154300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTTTCCACCTACCAAAACAGAGGACAGTATTGCTATTTATCTACACAAAATCTGCTCCAACACCACCACAATCTC CAACAACAGCAGCTCCTTCCAATTTGATCTGAGAACCCTCCTCAATTCACTGTCCTCTAAAGCCACCGGTGACACCCAAT TCTCCAATGCCTCAGTCATTGGCAGCACAGACCCATCTGACTCCGTCTATGGACTCTTCATGTGCAGGGGTGACATCCCC TCTAAACTCTGTCAAAATTGCATCAGAGACGCAACCCTGCAACTCTTCTCAGAGTGCTCCTCATCCAAACAAGCATTGAT TTGGTATGAGGAGTGCATGGTTCGCTTCTCCGATCGCAATTTCTTCTCGGCTGTGGAAACACAGCCGAGAATTAGCTTCT CAAACAGCCTTAACGTCTCAAACTCAGAAAGCTTCATGCATTTGGTGTTTGAGACCATGAATGCAACTGCAGATGCAGCG GCAGGTGGTGATGAGAAGAAGAAGTTTGCCACGAGGGAAGAAGTAACTGTTTCGGAAAATCAGACTCTTTACTGTCTAGC TCAGTGTACGCCGGACTTGTCGCCGCGTGATTGCAGAACATGTCTCAGTAGGGCAATAGGGGAATTTGCTAAGTGCTGTG GAGGAAAGCAGGGAGGGAGAGTTATGTATCCTAGCTGCAATGTGAGGTTTGAATTGAACAAATTTTACAGGGATATTGGT GACAAAGCACAGAGTGCTTCTCCATTATCAGGATCTCCAGATATTTGGTGGCTATAG
Protein sequence (LotjaGi2g1v0154300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFPPTKTEDSIAIYLHKICSNTTTISNNSSSFQFDLRTLLNSLSSKATGDTQFSNASVIGSTDPSDSVYGLFMCRGDIP SKLCQNCIRDATLQLFSECSSSKQALIWYEECMVRFSDRNFFSAVETQPRISFSNSLNVSNSESFMHLVFETMNATADAA AGGDEKKKFATREEVTVSENQTLYCLAQCTPDLSPRDCRTCLSRAIGEFAKCCGGKQGGRVMYPSCNVRFELNKFYRDIG DKAQSASPLSGSPDIWWL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 11 | 246 | 236 | 3.7E-84 | – | |
| PANTHER | 11 | 246 | 236 | 3.7E-84 | – | |
| Gene3D | 13 | 121 | 109 | 8.7E-25 | ||
| ProSiteProfiles | 14 | 121 | 108 | 19.856 | ||
| Pfam | 20 | 118 | 99 | 3.8E-19 | ||
| ProSiteProfiles | 127 | 235 | 109 | 20.535 | ||
| Gene3D | 127 | 235 | 109 | 1.7E-24 | ||
| Pfam | 140 | 231 | 92 | 2.7E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0154300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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