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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0159000 |
| Transcript ID | LotjaGi2g1v0159000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cation efflux protein/ zinc transporter, putative; TAIR: AT2G04620.1 zinc transporter-like protein; Swiss-Prot: sp|Q9SI03|MTP12_ARATH Metal tolerance protein 12; TrEMBL-Plants: tr|A0A0L9TLB8|A0A0L9TLB8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0159000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:55997938..56001280) extracted from Lotus japonicus Gifu genome v1.2.
CTAAAAAATGACCATTTTAAAATTTTTGAAAAGTGTTTATTCTGAAGCGAAAACTGTATTGGCTGCTGAAATTAAAACAC TACGACGACTGTGTTAGTTGTGTGACTGACTTGTAGACTCACCATGGCGGACCAACGCAACCACCACCAACACCGACCGC ACCGCCTCTCCGTACCACCGCGCACAACCACTTTCTCCGCCACACCAAGACCCCCCTACACCCCATTCCGCTACCCACCG TCGTCAACCCCAACACCCACCCCTTCCAAACACCGCCTATCCTTCAATTCCAAATCGAAATCCAAACCCTCCCTCTCCTT CCTCTTCCTCCTCCTCCTCCTCTCCCTCCGCTCCCTCTACTCCCTCCTCCCTTTCCTCCGCTCCTCCCCTCCCTCCTTCT CCCTCTTCCCCTTTTCCTTCCTCGTTTCCCTCCTCTCATTTTCCCTCACACTTTCCTTCTCCCTTTTCCCCTCCAAATCC AAACACAACCAACCTACCCTTTTCTCTTCAATCTCACCCTCTCAGCAGAGGGTTCTCGTTTTCAAATCAATCCTTCTCTC ACTCGTCTTCCTCCTCCGCTTCCAAGCCCTCCTTTACTGCACCACCGCCGCCATGATCCTCGCCGAGTTCATGGGCACCG TCGCCGCCCGCGCCTTGTTCCGTCGAAAAAACCACTCCAGTAACGGTTGGCGCGGGTTCGCGTCGTTGTTTTTGGGACTT TCCATGTTGTCATTTGGCTGGGATCGGATTGAGTGTTTCCCATTTTCTAAATTAGATGAGAATTGTGTGAGGATTTGGCC ATTGTTGCTTCCTTTTGTGTCGGGATTTCTCGGGTGCTATGAACAAAGGGTTTCGGATTGGGGGAACGTTAAGCAGCTCG GTCATAAACGGGTTCGGTTGATTACTTTGTTGTTCACTACAATTGTGCTTTTTGTTCCTGCTGTGATTAGTTTCTTTGTG TTTGAAGAAAAGAGTGATAAGGATAGTGTTTCGTTCGCGAATTTGGCTTGGCCTCTGGCTAATACTGTTGTTTTCGGTGT GCTTTTGAGTGAGAATTGTTACAGTGGTGGTGAGAGTTGGTTGAGTTTCAAAGACTCCCAGAGGGAGTTTTTGGTGACTT TTGTGTGTACATTGGTATTAGAGCTTTTTTATTTCCCTGATCTTTCACTTTGGGGTTTGTTGCTTTGTGGTGTGTTGCTT TATGTGGCTGTTAGAGACTTGGATCCTTTTCGTTCGAATGAGCTTGGTATTGTGTCAGGAGAGGAGTCATCGGAGTTACT GAGTGACATGATTATGAAGCCTGTGAGACATATTTTGAGTGAGAGGAAGTCGAGGAAGATTGCGCTTTTTCTCTTGATCA ATGCGGGTTACATGGTTGTGGAGTTTGCGGCTGGGTTTATGAGCAATAGTCTTGGTCTGATATCTGATGCGTGTCACATG TTGTTTGATTGTGCTGCTCTGGCAATTGGGCTGTATGCTTCGTATATATCTCGTTTGCCTGCGAATAACCACTATAACTA TGGCCGGGGAAGATTTGAGGTTCTATCAGGATATGCTAATGCTGTTTTTCTGGTTCTTGTGGGAGCATTGATAGTGGTGG AGTCCTTTGAGAGGATATTGGAGCCTCAAGAAATATCAACTAATAGTTTGTTGGTTGTCTCTATTGGAGGGCTCGTAGTC AATGTCATTGGCTTGATATTCTTTCATGAGGAGCATCACCATGCCCATGGATTGTCTGGGTCGTGCTCACACTCACACTC ACACTCACACACAGAGTCGCATAGTCACCACCCCCAACAACATCATGATCATGTGCATTGCGGTGGAAAGCATCATCACG AAAGACATGGAAGCAATCAAGAGTTCATTTCTGTTTCCAGTGATTGTCAAGACAATTTGTGCTCTGGTAATAGTACTGGC CATCACAACCACTCTGATCATGAGAGGAAGGCTGAGCGCCATGCAGACAATTACAGCATTCATGGAGATGGTCATTGCCA TGACCACCATGAACACGATGCTCATGGCCATGACCATCATCACCACACCAGCCACCATGATCACTGCAGCCATGAGGGGA AGACTGAGTGTCTTGCAGACAGTCACAGCATTCAGAGCTCTAAGGGTCATGACCATGCTCGGCAGCATGACCACCGTGAT CATGATCACCATGACCATGCCAGTCACCATAACCATAACCAACATCACCATCTTGATCTTGCAGACAGTCACAGCATTCA GAGCTCTAAGGGTCATGACCATGCTCGGCAGCATGACCACCGTGATCATGATCACCATGACCATGCCAGTCACCATGATC ATAAGCATCATCACCATCTTGATACTGACCACCATAGTCATGATGCTTCAGTTGTTCACAAAGAGCACAGCCATCGCCAT ATCGATCACAATATGGAAGGAATATTCTTGCATGTTCTTGCAGACACATTGGGGAGTGTTGGTGTTGTTATATCTACCCT ACTAATTAAGTACAAGGGATGGCTTATTGCTGATCCTGCCTGCTCAATTTTTATTTCGATTTTGATTATATCCTCAGTGA TACCTTTACTAAGGAATTCAGCTGAAATTTTGCTACAAAGAGTTCCAAGGGTGCAGGAGCATGAGCTGAAAGATTCCTTA ACTAAAGTTTCAAAGATAAGGGGAGTTTATGGCATTCCAAAGTTTCATTTATGGAGCTTCACAAACTCAGACATAGTGGG GACACTACATCTACACGTCTCCACAGATACCGACAAGATGTCCGTGAAGTCTCAGGTTTCACAACTGTTAAATAATGCTG GAATCAAAGATGTAACCTTGCAGGTGGAATGTGTGAGATAATATCTTTTGAGTTAGTTGGGTTGTTATCAGTATCTTTGA GTCCATGGCTATGATTGCCAGTGGAGACTGTGGATTAATTACTGATATACACTGCTTGGAACAGAGATCCCAATTTCCTG ATCATTGTCATAAGGAATGTTTGATAATTTACCATACTCATGATGTTTCATTTTGGGGATGATTTTTTGTGTGGATCTGT TTCCCGGGATTCAACAAATAGCTGAGTTGTCAATTGTTTTGTATGATGTAATGTAAAGACAAGCATAGGCTGTAAAAAAG CATATTAACATTGACATTTTATACCACAACAAATATTCTGCCTTTATTTCCTTTGGCTAATCTGTCTACTATGATTGAAT TGTTAGTCTAAGCTCACATGTTTCAAGGTCACAAATACTAAGAAATACTATTTACTAGTTTCAGCAATTGGGAACAATTA TAGTTGAGGTATGATTTTCACTCCACAGGGTCTGCATTGCTGTTAAATTGATGGCACAACAAT
CDS sequence (LotjaGi2g1v0159000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGACCAACGCAACCACCACCAACACCGACCGCACCGCCTCTCCGTACCACCGCGCACAACCACTTTCTCCGCCAC ACCAAGACCCCCCTACACCCCATTCCGCTACCCACCGTCGTCAACCCCAACACCCACCCCTTCCAAACACCGCCTATCCT TCAATTCCAAATCGAAATCCAAACCCTCCCTCTCCTTCCTCTTCCTCCTCCTCCTCCTCTCCCTCCGCTCCCTCTACTCC CTCCTCCCTTTCCTCCGCTCCTCCCCTCCCTCCTTCTCCCTCTTCCCCTTTTCCTTCCTCGTTTCCCTCCTCTCATTTTC CCTCACACTTTCCTTCTCCCTTTTCCCCTCCAAATCCAAACACAACCAACCTACCCTTTTCTCTTCAATCTCACCCTCTC AGCAGAGGGTTCTCGTTTTCAAATCAATCCTTCTCTCACTCGTCTTCCTCCTCCGCTTCCAAGCCCTCCTTTACTGCACC ACCGCCGCCATGATCCTCGCCGAGTTCATGGGCACCGTCGCCGCCCGCGCCTTGTTCCGTCGAAAAAACCACTCCAGTAA CGGTTGGCGCGGGTTCGCGTCGTTGTTTTTGGGACTTTCCATGTTGTCATTTGGCTGGGATCGGATTGAGTGTTTCCCAT TTTCTAAATTAGATGAGAATTGTGTGAGGATTTGGCCATTGTTGCTTCCTTTTGTGTCGGGATTTCTCGGGTGCTATGAA CAAAGGGTTTCGGATTGGGGGAACGTTAAGCAGCTCGGTCATAAACGGGTTCGGTTGATTACTTTGTTGTTCACTACAAT TGTGCTTTTTGTTCCTGCTGTGATTAGTTTCTTTGTGTTTGAAGAAAAGAGTGATAAGGATAGTGTTTCGTTCGCGAATT TGGCTTGGCCTCTGGCTAATACTGTTGTTTTCGGTGTGCTTTTGAGTGAGAATTGTTACAGTGGTGGTGAGAGTTGGTTG AGTTTCAAAGACTCCCAGAGGGAGTTTTTGGTGACTTTTGTGTGTACATTGGTATTAGAGCTTTTTTATTTCCCTGATCT TTCACTTTGGGGTTTGTTGCTTTGTGGTGTGTTGCTTTATGTGGCTGTTAGAGACTTGGATCCTTTTCGTTCGAATGAGC TTGGTATTGTGTCAGGAGAGGAGTCATCGGAGTTACTGAGTGACATGATTATGAAGCCTGTGAGACATATTTTGAGTGAG AGGAAGTCGAGGAAGATTGCGCTTTTTCTCTTGATCAATGCGGGTTACATGGTTGTGGAGTTTGCGGCTGGGTTTATGAG CAATAGTCTTGGTCTGATATCTGATGCGTGTCACATGTTGTTTGATTGTGCTGCTCTGGCAATTGGGCTGTATGCTTCGT ATATATCTCGTTTGCCTGCGAATAACCACTATAACTATGGCCGGGGAAGATTTGAGGTTCTATCAGGATATGCTAATGCT GTTTTTCTGGTTCTTGTGGGAGCATTGATAGTGGTGGAGTCCTTTGAGAGGATATTGGAGCCTCAAGAAATATCAACTAA TAGTTTGTTGGTTGTCTCTATTGGAGGGCTCGTAGTCAATGTCATTGGCTTGATATTCTTTCATGAGGAGCATCACCATG CCCATGGATTGTCTGGGTCGTGCTCACACTCACACTCACACTCACACACAGAGTCGCATAGTCACCACCCCCAACAACAT CATGATCATGTGCATTGCGGTGGAAAGCATCATCACGAAAGACATGGAAGCAATCAAGAGTTCATTTCTGTTTCCAGTGA TTGTCAAGACAATTTGTGCTCTGGTAATAGTACTGGCCATCACAACCACTCTGATCATGAGAGGAAGGCTGAGCGCCATG CAGACAATTACAGCATTCATGGAGATGGTCATTGCCATGACCACCATGAACACGATGCTCATGGCCATGACCATCATCAC CACACCAGCCACCATGATCACTGCAGCCATGAGGGGAAGACTGAGTGTCTTGCAGACAGTCACAGCATTCAGAGCTCTAA GGGTCATGACCATGCTCGGCAGCATGACCACCGTGATCATGATCACCATGACCATGCCAGTCACCATAACCATAACCAAC ATCACCATCTTGATCTTGCAGACAGTCACAGCATTCAGAGCTCTAAGGGTCATGACCATGCTCGGCAGCATGACCACCGT GATCATGATCACCATGACCATGCCAGTCACCATGATCATAAGCATCATCACCATCTTGATACTGACCACCATAGTCATGA TGCTTCAGTTGTTCACAAAGAGCACAGCCATCGCCATATCGATCACAATATGGAAGGAATATTCTTGCATGTTCTTGCAG ACACATTGGGGAGTGTTGGTGTTGTTATATCTACCCTACTAATTAAGTACAAGGGATGGCTTATTGCTGATCCTGCCTGC TCAATTTTTATTTCGATTTTGATTATATCCTCAGTGATACCTTTACTAAGGAATTCAGCTGAAATTTTGCTACAAAGAGT TCCAAGGGTGCAGGAGCATGAGCTGAAAGATTCCTTAACTAAAGTTTCAAAGATAAGGGGAGTTTATGGCATTCCAAAGT TTCATTTATGGAGCTTCACAAACTCAGACATAGTGGGGACACTACATCTACACGTCTCCACAGATACCGACAAGATGTCC GTGAAGTCTCAGGTTTCACAACTGTTAAATAATGCTGGAATCAAAGATGTAACCTTGCAGGTGGAATGTGTGAGATAA
Protein sequence (LotjaGi2g1v0159000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADQRNHHQHRPHRLSVPPRTTTFSATPRPPYTPFRYPPSSTPTPTPSKHRLSFNSKSKSKPSLSFLFLLLLLSLRSLYS LLPFLRSSPPSFSLFPFSFLVSLLSFSLTLSFSLFPSKSKHNQPTLFSSISPSQQRVLVFKSILLSLVFLLRFQALLYCT TAAMILAEFMGTVAARALFRRKNHSSNGWRGFASLFLGLSMLSFGWDRIECFPFSKLDENCVRIWPLLLPFVSGFLGCYE QRVSDWGNVKQLGHKRVRLITLLFTTIVLFVPAVISFFVFEEKSDKDSVSFANLAWPLANTVVFGVLLSENCYSGGESWL SFKDSQREFLVTFVCTLVLELFYFPDLSLWGLLLCGVLLYVAVRDLDPFRSNELGIVSGEESSELLSDMIMKPVRHILSE RKSRKIALFLLINAGYMVVEFAAGFMSNSLGLISDACHMLFDCAALAIGLYASYISRLPANNHYNYGRGRFEVLSGYANA VFLVLVGALIVVESFERILEPQEISTNSLLVVSIGGLVVNVIGLIFFHEEHHHAHGLSGSCSHSHSHSHTESHSHHPQQH HDHVHCGGKHHHERHGSNQEFISVSSDCQDNLCSGNSTGHHNHSDHERKAERHADNYSIHGDGHCHDHHEHDAHGHDHHH HTSHHDHCSHEGKTECLADSHSIQSSKGHDHARQHDHRDHDHHDHASHHNHNQHHHLDLADSHSIQSSKGHDHARQHDHR DHDHHDHASHHDHKHHHHLDTDHHSHDASVVHKEHSHRHIDHNMEGIFLHVLADTLGSVGVVISTLLIKYKGWLIADPAC SIFISILIISSVIPLLRNSAEILLQRVPRVQEHELKDSLTKVSKIRGVYGIPKFHLWSFTNSDIVGTLHLHVSTDTDKMS VKSQVSQLLNNAGIKDVTLQVECVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 63 | 63 | - | – | |
| MobiDBLite | 1 | 59 | 59 | - | – | |
| MobiDBLite | 31 | 45 | 15 | - | – | |
| TMHMM | 63 | 85 | 23 | - | – | |
| Phobius | 64 | 82 | 19 | - | – | |
| PANTHER | 80 | 904 | 825 | 1.5E-194 | – | |
| PANTHER | 80 | 904 | 825 | 1.5E-194 | – | |
| Phobius | 83 | 93 | 11 | - | – | |
| Phobius | 94 | 116 | 23 | - | – | |
| TMHMM | 95 | 117 | 23 | - | – | |
| Phobius | 117 | 136 | 20 | - | – | |
| TMHMM | 137 | 156 | 20 | - | – | |
| Phobius | 137 | 155 | 19 | - | – | |
| Phobius | 156 | 160 | 5 | - | – | |
| TMHMM | 160 | 179 | 20 | - | – | |
| Phobius | 161 | 179 | 19 | - | – | |
| Phobius | 180 | 190 | 11 | - | – | |
| TMHMM | 186 | 206 | 21 | - | – | |
| Phobius | 191 | 209 | 19 | - | – | |
| Phobius | 210 | 220 | 11 | - | – | |
| Phobius | 221 | 239 | 19 | - | – | |
| TMHMM | 221 | 239 | 19 | - | – | |
| Phobius | 240 | 258 | 19 | - | – | |
| Phobius | 259 | 279 | 21 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 280 | 290 | 11 | - | – | |
| Phobius | 291 | 308 | 18 | - | – | |
| Phobius | 309 | 328 | 20 | - | – | |
| Phobius | 329 | 344 | 16 | - | – | |
| TMHMM | 341 | 363 | 23 | - | – | |
| Phobius | 345 | 349 | 5 | - | – | |
| Phobius | 350 | 366 | 17 | - | – | |
| Phobius | 367 | 405 | 39 | - | – | |
| SUPERFAMILY | 401 | 825 | 425 | 1.28E-44 | ||
| Gene3D | 402 | 548 | 147 | 1.5E-27 | ||
| TIGRFAM | 403 | 534 | 132 | 9.7E-42 | ||
| Phobius | 406 | 426 | 21 | - | – | |
| TMHMM | 406 | 428 | 23 | - | – | |
| Pfam | 408 | 543 | 136 | 4.9E-34 | ||
| Phobius | 427 | 431 | 5 | - | – | |
| Phobius | 432 | 452 | 21 | - | – | |
| TMHMM | 438 | 460 | 23 | - | – | |
| Phobius | 453 | 472 | 20 | - | – | |
| TMHMM | 473 | 495 | 23 | - | – | |
| Phobius | 473 | 492 | 20 | - | – | |
| Phobius | 493 | 503 | 11 | - | – | |
| Phobius | 504 | 527 | 24 | - | – | |
| TMHMM | 505 | 527 | 23 | - | – | |
| Phobius | 528 | 766 | 239 | - | – | |
| MobiDBLite | 537 | 576 | 40 | - | – | |
| MobiDBLite | 617 | 639 | 23 | - | – | |
| MobiDBLite | 617 | 757 | 141 | - | – | |
| MobiDBLite | 664 | 728 | 65 | - | – | |
| MobiDBLite | 741 | 757 | 17 | - | – | |
| Gene3D | 748 | 824 | 77 | 1.1E-8 | ||
| Pfam | 751 | 824 | 74 | 4.9E-13 | ||
| TIGRFAM | 753 | 902 | 150 | 5.3E-37 | ||
| TMHMM | 766 | 788 | 23 | - | – | |
| Phobius | 767 | 788 | 22 | - | – | |
| Phobius | 789 | 793 | 5 | - | – | |
| TMHMM | 793 | 815 | 23 | - | – | |
| Phobius | 794 | 816 | 23 | - | – | |
| Phobius | 817 | 905 | 89 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0159000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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