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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0160500 |
| Transcript ID | LotjaGi2g1v0160500.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 65-kDa microtubule-associated-like protein; TAIR: AT5G51600.1 Microtubule associated protein (MAP65/ASE1) family protein; Swiss-Prot: sp|Q9FHM4|MA653_ARATH 65-kDa microtubule-associated protein 3; TrEMBL-Plants: tr|A0A0B2R7T4|A0A0B2R7T4_GLYSO 65-kDa microtubule-associated protein 3; Found in the gene: LotjaGi2g1v0160500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:56306445..56312290) extracted from Lotus japonicus Gifu genome v1.2.
CTTAAAACGGCTACATTCCCTCTCTCTCTCTCTCTCTTCCCAAACTCACAAAACTGCATTTTCCTGGAAAATCCATTGTC ATTTTCTCAGGAAAAAGCACAACAATTCCTCCTTTCATCCCAATCCCTTTGCTCACATTCACAGGTCAGCACTTCCTTCA CTAAATTGGTAAATTTCTCCTCTTTTCTTTCTGGGTTCCCTCAAAGTTTAACCCTTTCGGTTTCTATTTTCTAAGGAAAG TGCGGGTAACAGAAAAGTTTCCAACGTAGGTTCCACAAATTCCCCCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAC ATGAACCTTAATTTAGCATCTTTCTATGTAGTTTCTGTGTTCTTCACATCCTAGGTCATTGGATTATTCTATATTTTCCT CTTTCCCACATTCTTAATTGGTCATGTAATGTCTGTGTTTCTGTTTTCAATTGTCCATTTGGGTTGCCGTTTCTTCGCGC TTGCTTTTAAGTTTGAATTTGAGTTCTATTGAATCTCAGGCTTCAATTTGTTATGTTTGGTTGTCTTCAATTTTTGCCTC ATTGGATTAAGTAATTTTATTAACAACTATGATTCCTCTTGCATGGTTATCTGTTTGAATCATTAATCATGGGTTTTAAC TTTTAAATCTGCTGCAAGATTTTGTTGATTTATATTTCTGTGATGAGTCAATTTCTAGTCAGTTTATTTAGAATGTTGAT TAATGTGTTGCAAGTTTCACTTTATTAAATTTTCTTTTGGAATGTTTAAAGAACATTCTTTTTTTAGTAGGTAAAAGTGT TCCAAAATGTCTATATCTCAAAATGATCCTCTTTTGCAAGCTGAAACAACATGTAAATCACTTCTTCAAGAGCTTCAGGT ACACATAAATTTTGCTGCAATTTTCTTTGCTACTCCCCCTTCCACAAGCCAATTAAAGAGCATTCAGTAAACTGTGAATA TAACAATACTTTTGTTGGTTTATTTTTCACACTAGATAATATGGGGTGAAGTTGGAGAGTCTGAGACTGAAAAAGATAGA ATGTTGTTTGAGATTGATCAAGAGTGTCTAGATGTATACCGAAGAAAGGTAGATAAAGCTAATCGGTCTAGAGCTCAACT AAGGCAGGAAATCGCTGATTGTGAGGCAGAACTCGCAGCTATCTGTTTAGCTATGGCAGAGAGACCAGTACATATGAGGC AGGTTGGATATCTACAAATTGCTCCTTTTTTAATGCTGTGTTAGGGCATGTATTTGTATTGTTGCTTAAACAGGTGGAAA AATGAGGTTAAGTAAATAAAAACATGTTTAATGTAATTTGTGTGACAATAATTTGGAATGGTTTCGTGATGTATTAATTA AATTAGTTTCTTCGCATTAATAAGAGTGTGTGCACATATTTGTATCTAAACTGTTTTAGTGATTACTATACTATGTATTA ATGTGGCTGTTGAATTTCAAAGTTGTTACTGTTGAATTCTGCTGGCAAGATTATTTGCTATCCAATTGATATAATGAGAA AAGGATTGGTTGTTTTTTGCCTCTATTTTTCTAGTCTGATCAAAAGGCTGGAAGCTTGAAGGAGGAGCTAGCAAGAATTC ACCCAGAACTGGAAGAAATGAGAAAAAGGAAACTTGAGCGTAGAAATCATTTTGTAGAAGTCCAGGAGCAGATTCAAAGT ACTTCAAATGAGATTTATGGCCTGGTAGAATATATTCCAGCCATTGTAGATGAAACTGATTTATCTTTGAGAAAGCTTGA AGAATTGCACAGACAGCTTCATGCACTTCAAAAGGAGAAGGTCTATATTTACTTCTACTTCACACACATACTTCAAATTT TTATCACACTATTTTACTCTTCATTTCTGATTTTTTTTTCATGCAGAGTGATCGTCTCAAGAAGGTCCAAGAGCACCTGT ACACTTTAAATTCTCTTTGTTCAGTGCTTGGCTTGAACTTCAAGCAGACAGCCAGTGGAGTCCATCCAAGTTTAGGAAAT TCAGAAGGATCTAAAAGTGTAAATAATGACACCATCGGCAAATTGGTTGTTGCTATACAAGAGCTGCGGGAAGTAAAATT ACAGAGAATGCAGAAGGTAAGGCCTCTTTAAGATATGAAACATAACTCTAGTTGTAATTCATGTTATTTCTTCTAGTTTA AAGTCATGAGTTGTTTATGGTCTGGCAGCTACAAGATCTAGCGACAACAATGCTGGAGCTCTGGAATCTGATGGATACAC CCATTGAAGACCAACAGAGGTTTCAGAATGTTACTAGTAATATAGCTGCTTCAGAACATGAAGTAACTGAACCAAACACC TTGTCTGAGGACTTCATCAATTACGTGAGTTATAATTTTCTGGAGAAAATAAGAACTACATCTCTTAATTCTTTGTCGTT CCGAATTCCTGAAGCAGTGGTAATTCCATGCAGGTTGAGGCAGAAGTATCTAGATTAGAAGAGTTAAAATCAAGCAAAAT GAAAGAGCTAGTCTTGAAGAAAAGAGCAGAGCTAGAGGAAATCTGTCGAAGAACTCGTTTAATTCCAGAAATTGATAGTG AAGTGGAAAATGCTGTAGAAGCTATAGAGTCTGGTAACTCCCATGTGAGATACCACTGGATGATTGCAATTATTTCTTCT GTAAACCTTAAGTCTGTATTCTTCTTTCTTATGCAGGATCTGTAGATCCTGTTAGTGTGCTTGAGCGCATTGAACTTCAG ATCGCCCAAGTCAAAGAGGAAGCTTTCAGCAGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGTCAGCATGTGATGA AGAGTCCTGGCTTGAGGAGTACAACAAGGTTAGCTTTTTTCATCTTCCTAGTTTTGGTAGCTTACATTAGGTGATTTAGG TTGCAGTCTTGAACACTTACTATACTGTTTAATAACTTGTTATAAACATTTATTGGCGTAATTTCGCCAGTGGTGGTGAA ATTGAATGTTTATATTGATATCAGTGTAAGTGGGTCCTCCCTCAAGTAATTGTCAAACTCATAGTGTATTAATTTTATTG TCTTTCTTCCAGGATGAAAATCGTTACAATGCTGGGAGAGGTACTCATCTTACTCTCAAGCGAGCTGAGAAAGCCCGTGC ACTGGTTAACAAAATTCCAGGTATTTATAGACCGTAGTTCTCGGTCATATCTGTTAGCTCAATGATTTTAAAACAATTAT GTTTTTTCTGTGAGTCTGTGCGTGTTTAATAGTGTAGATTGTAGAATGTCTTTTTCTTTTGTCTTATTCACATTTAGCAC ATTTCTTACTTGTTTAGAACATGTTTTTGATTTTATTTTGTTTGTACACAGCAATGGTAGACAATTTGACTTCAAAAACT GTAGCATGGGAAAAGGATAGAGGTGCGGAGTTCATGTATGATGATGTAAGTATCCTCTACCTGCAATGAGATAGTGGCAT AAGGAATTATTGGAGGTCATCTCTATAAGTCGGTTACTCAAGTAAATTTTGTGTCAAACTAATTTGTACTGTTATGTGAC TTTCTAGATCCGTCTGCTCTGTATGCTTGAAGATTACACACTACTAAGACAAGAAAAGGAGCAAGAACGCCGTAGGCATA GGGTACAGACCGTTATTGCATTTAAATGTTTCTCCAAAATAAATTTTCTAGTTATAAGAAAAGCTTGAGCTTTTATCTCA AAATTGAAATCCATGCAAAATTTTATCTATTTGTATCATCCAACAAATAGAAGGCTTGTGTTTTTTCTCCTCTAGTTAAA ATGTTACATTTCTGTTTAGGACCTGAAGAAACTTCAGGGACAATTGATAGCCGAACAGGAAGTAATATATGGGTCAAAAA GTCCTTTGAAGAAGTCCCCGAGTGTAAAAAAGACACCTAGGACGCCAACTAGTAGTACCCCTCGAACGCCAACTGGAATT GCAGCTAGTAGAAGAGTCTCAACTCCAAGATCTGATTTGAAAAGTACCCTATCATGCACCCCAAAGAAGACTGACAAAGT GCACCAAATTCAGCCACTAAATTACCTAGATGATGATGGAGATTCATATATATCATCAGGTAGTTTCTCTGGAGTACTTT TTTTTTTTTCCACCTACTTTTTTAGCCACTGGCTTGCAGACTTCTCTCGCCTTATTATGTATGGGTTTAATAATCGTTTT TCTTCCTGTTTGGTTCGGAAGGAAGCAATCTGTTGAGGATTTGTTACCCTTAGTTTTGGCTGAAGTGTGGCAAGGGGATT GTTTGGGATATGTTAGGTTCTCTAGGTCCAATACTTTTATTCGTTTGAGAAAGAAAGGCAACCTTAATATTGTCAGATTC GAACACAATGACATGTTTCTCTGCATTTTTTTTTTCAAAACTGTTTTCGGTTTTTAAGAATTTAAAAATTTAAAAACATG TTTTCAAAATGTGATTTAAAAACAGTTCTTATTTTCAGTTTTTAAAACTAAAATCTCAAAACATCTATGAGATTTTTAAC GTTGTAAAACAATAATTTGGACTTCTATTTCTGTTTCTATAAAACTTCATCTATAAAACTTCTATTTCTGTTTTTAGTTT TCAAATTACAGTTTTTTAACGTTGTAAAACATTTCATACAAACTGTTATTTTCTTGAGATTTTAAAACATTTTATGGACT AAAACAGAAATCAAACAAGCCATGAGGGTTTAGAAGAATGTAGTAATGTGCCAAAAAATAATTAATGCGGAACTATAAGA TTGTCGGATGCCTTTTTATGTTTTTCTTGGATTTAGAAGAAGATTCTCTGTTGGTTGTGTCAACTTGTTGCCATCTAAAA CAGAACTTCAAAGATTGTTGGATGCCTATTTATGTGTTCCTTTGTTTTAGACGAAGATTCTCCAACGGATTCTCCCAAGT ACTCTTGATGGATGGCCTTTTGGTAAGGCTGTATGTGGCACCAAGGAATTGTTTAGGCCCTTATTTTTGGTTTTGATGTT GAAGGTGGAGGCCAAAGCCACATCTCAGCTGCTAGATTTTTGCATAATTTCTTGCTGGTACATCTAGCATTTCTTTGATG TTTCTACTTCACATAATTTGCACAAACAGCTTTATACTTCGCACTTTTTATGTACCATATATGTATGTGCATATAGGAAA CTCTTATGATTTTCATGTTCATGCAGCTAGAAGAGGACTCAATATTGCTGATGTTACTGGTATTCCCATGAGAAAATGCT CATTTGGTGCTGGAAGTGTCCAGGATGTAGAATCTCCTTTGACACGACAACCTTTTTCTCCCGTCTGTTCGACAGTATCA TCGAAATCGAACGTGGCTAATGCCGCAGGTGAGTCTAATATACAAAACAAGAAGTTGCTGAAAGCATTAGAATTTAACAA TTTGCCATTCATTACTGCTACCTCAAAGACAGCCGCCACTACTGTTGTAGATGAAGAGAATATAACTCCTAAGGCAATGC CTCCAACTCCTTCATCAGTTCCTTTTAGAGGTGACTTGGTTCAAGTTCAAGAGATTGAATACTCCTTTGAGGAAAGAAGG CTCGGTTATGTGTTAGCATGAATTTGCTTTTCTTGGTTTTCTATTTTCCCCAGTTTACATTGTCATAGTTACCTTTCATG GCAATCTCAAGGCAAATTTAGTTGGCTTACCGGTTATGTACATAATAGTCTATGAGAAGTGGACATGTACAGACAGGGTC TTATTAGTGCAAGATTTTGCAATCTAATTTCATTTGTTTTTCTTCACCAAGAAAAGATTGATCTGAAAACTGTTTTGCTG TGCCAGCTCTGCTCTTCTTTCTGGTTTGATGTCTGCTATAAATGTAATAAGAAATAAGATTTTATATTAAGAGTAATATA TGTGGG
CDS sequence (LotjaGi2g1v0160500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTATATCTCAAAATGATCCTCTTTTGCAAGCTGAAACAACATGTAAATCACTTCTTCAAGAGCTTCAGATAATATG GGGTGAAGTTGGAGAGTCTGAGACTGAAAAAGATAGAATGTTGTTTGAGATTGATCAAGAGTGTCTAGATGTATACCGAA GAAAGGTAGATAAAGCTAATCGGTCTAGAGCTCAACTAAGGCAGGAAATCGCTGATTGTGAGGCAGAACTCGCAGCTATC TGTTTAGCTATGGCAGAGAGACCAGTACATATGAGGCAGTCTGATCAAAAGGCTGGAAGCTTGAAGGAGGAGCTAGCAAG AATTCACCCAGAACTGGAAGAAATGAGAAAAAGGAAACTTGAGCGTAGAAATCATTTTGTAGAAGTCCAGGAGCAGATTC AAAGTACTTCAAATGAGATTTATGGCCTGGTAGAATATATTCCAGCCATTGTAGATGAAACTGATTTATCTTTGAGAAAG CTTGAAGAATTGCACAGACAGCTTCATGCACTTCAAAAGGAGAAGAGTGATCGTCTCAAGAAGGTCCAAGAGCACCTGTA CACTTTAAATTCTCTTTGTTCAGTGCTTGGCTTGAACTTCAAGCAGACAGCCAGTGGAGTCCATCCAAGTTTAGGAAATT CAGAAGGATCTAAAAGTGTAAATAATGACACCATCGGCAAATTGGTTGTTGCTATACAAGAGCTGCGGGAAGTAAAATTA CAGAGAATGCAGAAGCTACAAGATCTAGCGACAACAATGCTGGAGCTCTGGAATCTGATGGATACACCCATTGAAGACCA ACAGAGGTTTCAGAATGTTACTAGTAATATAGCTGCTTCAGAACATGAAGTAACTGAACCAAACACCTTGTCTGAGGACT TCATCAATTACGTTGAGGCAGAAGTATCTAGATTAGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTAGTCTTGAAGAAA AGAGCAGAGCTAGAGGAAATCTGTCGAAGAACTCGTTTAATTCCAGAAATTGATAGTGAAGTGGAAAATGCTGTAGAAGC TATAGAGTCTGGATCTGTAGATCCTGTTAGTGTGCTTGAGCGCATTGAACTTCAGATCGCCCAAGTCAAAGAGGAAGCTT TCAGCAGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGTCAGCATGTGATGAAGAGTCCTGGCTTGAGGAGTACAAC AAGGATGAAAATCGTTACAATGCTGGGAGAGGTACTCATCTTACTCTCAAGCGAGCTGAGAAAGCCCGTGCACTGGTTAA CAAAATTCCAGCAATGGTAGACAATTTGACTTCAAAAACTGTAGCATGGGAAAAGGATAGAGGTGCGGAGTTCATGTATG ATGATATCCGTCTGCTCTGTATGCTTGAAGATTACACACTACTAAGACAAGAAAAGGAGCAAGAACGCCGTAGGCATAGG GACCTGAAGAAACTTCAGGGACAATTGATAGCCGAACAGGAAGTAATATATGGGTCAAAAAGTCCTTTGAAGAAGTCCCC GAGTGTAAAAAAGACACCTAGGACGCCAACTAGTAGTACCCCTCGAACGCCAACTGGAATTGCAGCTAGTAGAAGAGTCT CAACTCCAAGATCTGATTTGAAAAGTACCCTATCATGCACCCCAAAGAAGACTGACAAAGTGCACCAAATTCAGCCACTA AATTACCTAGATGATGATGGAGATTCATATATATCATCAGACGAAGATTCTCCAACGGATTCTCCCAAGTACTCTTGA
Protein sequence (LotjaGi2g1v0160500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSISQNDPLLQAETTCKSLLQELQIIWGEVGESETEKDRMLFEIDQECLDVYRRKVDKANRSRAQLRQEIADCEAELAAI CLAMAERPVHMRQSDQKAGSLKEELARIHPELEEMRKRKLERRNHFVEVQEQIQSTSNEIYGLVEYIPAIVDETDLSLRK LEELHRQLHALQKEKSDRLKKVQEHLYTLNSLCSVLGLNFKQTASGVHPSLGNSEGSKSVNNDTIGKLVVAIQELREVKL QRMQKLQDLATTMLELWNLMDTPIEDQQRFQNVTSNIAASEHEVTEPNTLSEDFINYVEAEVSRLEELKSSKMKELVLKK RAELEEICRRTRLIPEIDSEVENAVEAIESGSVDPVSVLERIELQIAQVKEEAFSRKEILEKVEKWLSACDEESWLEEYN KDENRYNAGRGTHLTLKRAEKARALVNKIPAMVDNLTSKTVAWEKDRGAEFMYDDIRLLCMLEDYTLLRQEKEQERRRHR DLKKLQGQLIAEQEVIYGSKSPLKKSPSVKKTPRTPTSSTPRTPTGIAASRRVSTPRSDLKSTLSCTPKKTDKVHQIQPL NYLDDDGDSYISSDEDSPTDSPKYS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 543 | 543 | 5.7E-267 | – | |
| PANTHER | 1 | 543 | 543 | 5.7E-267 | ||
| Coils | 49 | 76 | 28 | - | – | |
| Pfam | 52 | 556 | 505 | 5.7E-128 | – | |
| Coils | 154 | 181 | 28 | - | – | |
| Gene3D | 365 | 499 | 135 | 6.1E-29 | – | |
| Coils | 462 | 485 | 24 | - | – | |
| MobiDBLite | 501 | 585 | 85 | - | – | |
| MobiDBLite | 505 | 554 | 50 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi2g1v0160500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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