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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0179200 |
| Transcript ID | LotjaGi2g1v0179200.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Yellow stripe-like transporter 12; TAIR: AT1G65730.1 YELLOW STRIPE like 7; Swiss-Prot: sp|Q9SHY2|YSL7_ARATH Probable metal-nicotianamine transporter YSL7; TrEMBL-Plants: tr|I1MQH0|I1MQH0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0179200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:60087549..60093458) extracted from Lotus japonicus Gifu genome v1.2.
TTCTTTTATAAGCATAAATCCCGTAAGTGTGAGCTCACAAAATAATATTCGAAAAGGGGAAATTAAAAATAATATCAATT TTATTAATTGTGTCCGTCTTAGTTCACATTATAACTTTCTCACTTTACCCAAAAAGAAAATCGTCCTTAATAATGACATC CAAATCTAATCTAATGTCCCCATACAATTGTGTGCTAGCTGGTCAATTCCACTATGTCACACAAGTCGATGACTTCTAGC AAAGGGGGGTTATCACATTCACATGTGCTCTCTTCCTCTCTCCATATTTTATCTATAATATATACATGTGTATATTATCA ATGACAATTGCCACCGTTAGTGGACAGTGTTTATTTATTTAATATGTTCCATTTTGATCCTTAGGAATAAATGTAAACAC CAACATTAACCCAATTGGAATTGGAGTTATTACTACATATACAACAATCCTAGTAGATTCCGAACCCACATCCACATAAT TGGGATCTCATCCTCTGCACTTTCCAACATATGGCCCAAAACGGGAATCAAGACAGGGTAATGGTGGAAAACACTGATGA TTATGATCATCACCACCATGACCACAATGACCATGACCATGCAAGTGGTGATGAACATGAAGAGAAGCTGAAAGGGAAGA AGAAAGAAGAAGAACCTTCTGTGGAGAGGGTGTTCCAGCACCTGCTTGTTCCTTCATGGAGGAACCAGCTGACAGTGAGA GCTTTTGTGGTCAGCTTTGCACTCAGCATACTGTTCAGTTTCATTGTCATGAAGCTCAACCTCACCACTGGAATCATTCC TTCACTCAATGTCTCTGCTGGACTTCTGGGATTTTTCTTTGTGAAGACTTGGACCAAGTTCTTGGAGAGGTCTGGGTGGT TGAAGCAGCCTTTTACTAGGCAGGAGAACACTGTCATCCAGACCTGTGTTGTTGCCTCCTCTGGCATAGCCTTTAGTGGT AACCTTATCTTACCTTCTCTGTTTCATTACTCTCTGTCTTTCTCAATCTTAAATGTCCCTATTGCTATGTTTTTTTCAGT GGTTACTGTTACCCTTTTTTTTGGTTCATGGGTTTAAATTTGATCTGTGACTGATTATAGCATGTTTCGATCAACTTATT TTTCATCAGAATCAATTCTGGCACCTAGAAGCTACTCAGAAGGTTCTCCACATAATTAATTTTGAGTTTAGACTCGATTG TAGAAGGATTTTTAAACATGCTAGTTATCTGCTAGCATGCTTCTTATATTTGAAATTGACATGAAGTTTTGAACAATTTG ATTTTTGGCACTGTTTGAGATTCTCTAGGATGCTAAATTGCAAGGGATATGATATGGGTTTGAGCAAAAGCATGGTTTCT AGTGTTGAATTTGACTCTGAATATGACTCATCCCAAAGAAAAACAAATCATTTTCTCCTGTTCAATCATTTATAGGATAA ATTTCAACAGAGAAATTCTTAGTAATACACTAATACCAGCACAAAGATGTTAACATTGGAATGATGAGTGTGTTTGAATT TTTATTAGCAAGACTAATAGCATATTTGGAAATCCTTGTAGAATTGATTCTACAAGCAAAATCAATTGTACGGAGAAGCT ACGGTGAGTAGCTTTTAGGTGTCAGAATTGATTATGAGAGAAAATAACCAGATCTAAACTTGCTAAGTTGCTATTAAAAG CACTTTTAATTGCAATTCATGTCTCACAACAGATTTAAGTAAAATTGCAGTTTGATCTCATGAATGTATCAGAAATCCAA ATCATAGAAACAAGATTTTGCCACATTGAGTTCAACGGAAATTTTAACACACGCTTATATAACTACTGGAGTGGTTCATC TTAGTGATATGGGAAATAGTTTTACTCAGGGTTGTTAATGGCGGATAGCGTAGTGTAGCGGCAAACCCAAAAAACGCTAT TTCAAGCGCTATTGCGGCGCTATAGTGCCAAATAGCTGTGAATAGTGGAGTAGCGGTGAACCCCTAGGGCGCTACACTAT AGGCTATTGCGTCGCTATAGCGCGCTATTAACAAGCCTGGTTTACTAGGATTGGATTCTCTTTATCTTATTCTAGTTTCC AAATTTTAAAGTCAACTCCCACTGTTTGAAAAGTTTGGAGGAAACTTGCTGGCTGGATGATATCACTATCTTTAGCTATC AAAGGTTACTTGCTAGTTGCTACTTTTCACTATCAATCACTGCCTACATGATAATGAACCTATAAATAGCAACAGGAGAA GAGCTGAAAAGTCACCCATTTCATCCTGTCTTGAAAGATGCAGCAGCTTTTGTTTTCAAACTTCAACTCATACCAGCAAA TTTGGAAAATTTTGGGCTGTATTAATTATTAGAAAAAATGTCCCAAGGCAGGAAGCATAGAAGCCAAATCAAACTAATTT TTCAGTATTAATAGTGAAAATGACTGTTTATAAGTCAATGTATTATTATTTGAACTTCAGCAACAGTTGGAAATTAATTT AATATCGCTTTCTCTTTTACTTTTCGCATGACATTGAATAAGAAGTTGATGTCTTTTATCAACTTCATCAGGTAAAGTTT TTATTGTTTTTTTTTTTGTTTTTTTGGTGCTGAGCTAAAGTTTCAATTTACTTTTTCTTATCTCATAATTACTTTTTTAC AAGATAATCTGTTTTGTATCATTTGAATGTATTGTATCTCACCTTGAAATGAAACTGTTTAATCTTGCTGAAATTTATGT CATAGTAATTTAAGAAAATTGGAATTTTAGAAAGGAAACTCTAGAATGAGATTTTGATGTTATAGATGTGAAAGGAAACC TAAGCTGGTTATGATCAAGAAACAGTTTTTTATTGATGTCATGATGATTGACTCACTTAAATGAAAATTTTCTTGTCATG ACAGGAGGATTTGGGAGTTACCTCTTTGCAATGAGTGAGCATGTAGCCAAGCAATCCTCAGACACCAGTGATTTTAAGGA CCCAAAATTAGGGTGGATCATTGCTTTTCTCTTTGTTGTTAGCTTTCTTGGCCTCTTCTCAGTTGTACCTCTAAGAAAGG TAATGACACATTCTTGAAATATTGATACTGCAGTATCCATAAATGAATATATTATTAATTTAGAAAACTTGATGATGCTT AAATCAACTTTTCTTTTTACAGACTCAGTTTTGGCACTTAGAAGCTACTCACAAAAGCTTCTCTCCATAATTGATTTTGG CTTCAGATTCAATCGAATCATAGAATCATTTTTTTCGCATTTTTCAGTCTTGGAAAATCATTGCAGAAACTTATTTTTAA GTAATAAAATGATTTATCTTTACTGCTTTACCTCTAGAAATTATTTATCAGTATCCCTTGCCATGCAACAGTCTTTGATT AATTTTTTGCTTCTGCTATTGGATGTAGATTATGGTCATAAAATTCAAATTGACATATCCAAGTGGTACTGCAACTGCAC ATCTCATCAACAGCTTCCACACTCCTCAAGGAGCCAAACTAGCAAAGTGAGCCCTATATAGCAGACTCCATGCAAAGTGA GTGCATGAGGAGTTAGACATCCATCATGCTAATTTACTGTTTCTTTTCTACTCTTCCAGGAAGCAGGTGAGAGTGTTGGG AAAATTCTTTGGATTGAGCTTCTTCTGGGGTTTCTTTCAATGGTTCTACACTGCTTCTGATTCTTGTGGATTTCAAGCCT TTCCCTCACTGGGGCTCAAAGCATTTGAAAACAGGTATGTTACCTGTCTTCTCTTATCACATCACATCCTTCATTTTAAA TCAAATTTATGTGTCCTAAGATATAACATAATAAAAAACATTAACAAAATTTATCCCACTAAGTGAAGTCGGCTATATGA ATCACATGATCCATGTTGAAAATACATCCAGTTTAACATTGGCTGCCGCAAGCCTAACACACCATTCCACCTTTATCTGG GCTTAGGACTGACTTTGACACAGCATATGCGGATTTTATCCTAATATAAAAACGTGCATTAATCTGATTGCAAGATACTT GAGATTAGTCCAGTTCTAATTTGTAAGTGTTAATCTAATCTTGACTTATTTGCAGGTTTTATTTTGATTTTGCTGCACTC TATGTTGGAGTGGGAATGATTTGCCCATATATCATAAATATATCAGTGCTCCTTGGAGGAATTCTTTCTTGGGGAGTAAT GTGGCCTCTCATAGAAAATCAAGAGGGTCACTGGTATGATAAGGGCCTCGGTGACGGTAGCCTTCATGGAATCCAAGGAT ATAGGGTAAGTTTCCTGATGCAAAGCACCTATAGAGTCACATTATTTTGCATAGTTTCTAAGGTATATCAATTAATTGGA TTCACCTTACATCTTAAGTTCAGGTATTTATAGCCATAGCCATGATCCTGGGTGACGGTTTATACAACTTCGTAAAGGTG CTAACTCATACCTTAATGGGTTTGTATTATCAAATCAAGGAGAAACATAGGGAGAATGTTCTTCCGGTCGCTGATCACGA TTCTCCCTCGAGTCAGCTAACTTACGATGACCAGCGCCGCCAGCAATTCTTTCTTAAAGATCAGATTCCCCCATGGTTTG CAGTTGGAGGCTATGTTGCTATTGCTGCTATCTCAACCGCCACTCTGCCACACCTTTTTCCCCAGCTAAAATGGTATTAC ATACTAGTTATCTACCTAGTTGCTCCCACCTTAGCATTCTGCAATGCTTATGGTTGCGGGCTAACAGACTGGTCCCTAGC ATCCACCTATGGAAAGCTCGCCATCTTCACAATCGGAGCGTGGGCCGGTGCATCACACGGTGGAGTTCTTGCTAGCCTTG CAGCCTGTGGCGTGATGATGAACATCGTTTCCACCGCCTCTGACCTGATGCAGGACTTCAAGACCGGCTACCTTACGCTG TCTTCACCGCGCTCCATGTTTGTGAGCCAAATACTTGGAACAGCTATGGGATGTGTGATTTCTCCTTGTGTCTTTTGGAT TTTCTACAAGGCCTTTCCTGACCTTGGGACACATAAAAGTGAGTACCCTGCCCCATATGCGATTGTGTACCGCAACATGG CCATACTTGGGGTACAAGGCTTCAGTTCGCTACCGAAAAATTGCCTCATGCTATGTTATATATTCTTTGGTGCCGCCATT GTGATAAACTTGATTAAAGATTTAATGGGCAAGAGAGGGAGGTTCATACCACTTCCAATGGCTATGGCAATTCCTTTCTA CATAGGGCCTTACTTTGCCATTGACATGTGTGTTGGAAGTTTGATATTATATGTCTGGGAAAAGGTTGACAAGGCTAAGG CAGATGCATTTGGACCAGCTGTAGCTTCTGGTTTGATATGTGGGGATGGAATATGGACACTTCCTGCTTCAGTACTTGCT CTTGTTGGAGTTAAGCCACCAATTTGCATGAGGTTCTTCTCAAGGGCCACAAATCAAAGGGTTGATACATTCTTAGGGAA TTAAGGTCAAGTTTGGATTGGGTTTGTCAATCACACAAAATATGTTGGAGAGAGTGTTTACACGAGCGTGTTGCTAGCGT TCCTTGTCTTTTTAATATTTGAGAGCTGTTACTGCCTTGTAAATGTGTCAAACTTCACTTAAGTTTGCTCTTTTCAACTT CTTTAGCCACATAGTTGAACAAAACCCAATGAAGAGAAGTATTAATGTATGTAATATATTAGATGTATGACAAAGAAAGT ATATATCTGCATGATTGGATTTCATTGTGTCATTTCGGGTAGGGGTGCACATGGCTTGGGTTGGATAGATTTTGGTCAAA ATAAAATCCGAACCGATCAAAATTGTCTGGATTTGGTTGGGTTGGATTTCACGAATTTCTTCTTCGGACCCGATCCGAAC CAACCCGACGAAGTTCGGATTGGATTGGATGGATTGATTGGGTCACTATATTAAAATAATAATATATCTG
CDS sequence (LotjaGi2g1v0179200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCCAAAACGGGAATCAAGACAGGGTAATGGTGGAAAACACTGATGATTATGATCATCACCACCATGACCACAATGA CCATGACCATGCAAGTGGTGATGAACATGAAGAGAAGCTGAAAGGGAAGAAGAAAGAAGAAGAACCTTCTGTGGAGAGGG TGTTCCAGCACCTGCTTGTTCCTTCATGGAGGAACCAGCTGACAGTGAGAGCTTTTGTGGTCAGCTTTGCACTCAGCATA CTGTTCAGTTTCATTGTCATGAAGCTCAACCTCACCACTGGAATCATTCCTTCACTCAATGTCTCTGCTGGACTTCTGGG ATTTTTCTTTGTGAAGACTTGGACCAAGTTCTTGGAGAGGTCTGGGTGGTTGAAGCAGCCTTTTACTAGGCAGGAGAACA CTGTCATCCAGACCTGTGTTGTTGCCTCCTCTGGCATAGCCTTTAGTGGAGGATTTGGGAGTTACCTCTTTGCAATGAGT GAGCATGTAGCCAAGCAATCCTCAGACACCAGTGATTTTAAGGACCCAAAATTAGGGTGGATCATTGCTTTTCTCTTTGT TGTTAGCTTTCTTGGCCTCTTCTCAGTTGTACCTCTAAGAAAGATTATGGTCATAAAATTCAAATTGACATATCCAAGTG GTACTGCAACTGCACATCTCATCAACAGCTTCCACACTCCTCAAGGAGCCAAACTAGCAAAGAAGCAGGTGAGAGTGTTG GGAAAATTCTTTGGATTGAGCTTCTTCTGGGGTTTCTTTCAATGGTTCTACACTGCTTCTGATTCTTGTGGATTTCAAGC CTTTCCCTCACTGGGGCTCAAAGCATTTGAAAACAGGTTTTATTTTGATTTTGCTGCACTCTATGTTGGAGTGGGAATGA TTTGCCCATATATCATAAATATATCAGTGCTCCTTGGAGGAATTCTTTCTTGGGGAGTAATGTGGCCTCTCATAGAAAAT CAAGAGGGTCACTGGTATGATAAGGGCCTCGGTGACGGTAGCCTTCATGGAATCCAAGGATATAGGGTATTTATAGCCAT AGCCATGATCCTGGGTGACGGTTTATACAACTTCGTAAAGGTGCTAACTCATACCTTAATGGGTTTGTATTATCAAATCA AGGAGAAACATAGGGAGAATGTTCTTCCGGTCGCTGATCACGATTCTCCCTCGAGTCAGCTAACTTACGATGACCAGCGC CGCCAGCAATTCTTTCTTAAAGATCAGATTCCCCCATGGTTTGCAGTTGGAGGCTATGTTGCTATTGCTGCTATCTCAAC CGCCACTCTGCCACACCTTTTTCCCCAGCTAAAATGGTATTACATACTAGTTATCTACCTAGTTGCTCCCACCTTAGCAT TCTGCAATGCTTATGGTTGCGGGCTAACAGACTGGTCCCTAGCATCCACCTATGGAAAGCTCGCCATCTTCACAATCGGA GCGTGGGCCGGTGCATCACACGGTGGAGTTCTTGCTAGCCTTGCAGCCTGTGGCGTGATGATGAACATCGTTTCCACCGC CTCTGACCTGATGCAGGACTTCAAGACCGGCTACCTTACGCTGTCTTCACCGCGCTCCATGTTTGTGAGCCAAATACTTG GAACAGCTATGGGATGTGTGATTTCTCCTTGTGTCTTTTGGATTTTCTACAAGGCCTTTCCTGACCTTGGGACACATAAA AGTGAGTACCCTGCCCCATATGCGATTGTGTACCGCAACATGGCCATACTTGGGGTACAAGGCTTCAGTTCGCTACCGAA AAATTGCCTCATGCTATGTTATATATTCTTTGGTGCCGCCATTGTGATAAACTTGATTAAAGATTTAATGGGCAAGAGAG GGAGGTTCATACCACTTCCAATGGCTATGGCAATTCCTTTCTACATAGGGCCTTACTTTGCCATTGACATGTGTGTTGGA AGTTTGATATTATATGTCTGGGAAAAGGTTGACAAGGCTAAGGCAGATGCATTTGGACCAGCTGTAGCTTCTGGTTTGAT ATGTGGGGATGGAATATGGACACTTCCTGCTTCAGTACTTGCTCTTGTTGGAGTTAAGCCACCAATTTGCATGAGGTTCT TCTCAAGGGCCACAAATCAAAGGGTTGATACATTCTTAGGGAATTAA
Protein sequence (LotjaGi2g1v0179200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQNGNQDRVMVENTDDYDHHHHDHNDHDHASGDEHEEKLKGKKKEEEPSVERVFQHLLVPSWRNQLTVRAFVVSFALSI LFSFIVMKLNLTTGIIPSLNVSAGLLGFFFVKTWTKFLERSGWLKQPFTRQENTVIQTCVVASSGIAFSGGFGSYLFAMS EHVAKQSSDTSDFKDPKLGWIIAFLFVVSFLGLFSVVPLRKIMVIKFKLTYPSGTATAHLINSFHTPQGAKLAKKQVRVL GKFFGLSFFWGFFQWFYTASDSCGFQAFPSLGLKAFENRFYFDFAALYVGVGMICPYIINISVLLGGILSWGVMWPLIEN QEGHWYDKGLGDGSLHGIQGYRVFIAIAMILGDGLYNFVKVLTHTLMGLYYQIKEKHRENVLPVADHDSPSSQLTYDDQR RQQFFLKDQIPPWFAVGGYVAIAAISTATLPHLFPQLKWYYILVIYLVAPTLAFCNAYGCGLTDWSLASTYGKLAIFTIG AWAGASHGGVLASLAACGVMMNIVSTASDLMQDFKTGYLTLSSPRSMFVSQILGTAMGCVISPCVFWIFYKAFPDLGTHK SEYPAPYAIVYRNMAILGVQGFSSLPKNCLMLCYIFFGAAIVINLIKDLMGKRGRFIPLPMAMAIPFYIGPYFAIDMCVG SLILYVWEKVDKAKADAFGPAVASGLICGDGIWTLPASVLALVGVKPPICMRFFSRATNQRVDTFLGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 48 | 48 | - | – | |
| Phobius | 1 | 66 | 66 | - | – | |
| MobiDBLite | 12 | 48 | 37 | - | – | |
| PANTHER | 17 | 704 | 688 | 0.0 | – | |
| PANTHER | 17 | 704 | 688 | 0.0 | – | |
| TIGRFAM | 65 | 681 | 617 | 6.4E-116 | ||
| Pfam | 66 | 680 | 615 | 2.1E-155 | ||
| Phobius | 67 | 89 | 23 | - | – | |
| TMHMM | 67 | 86 | 20 | - | – | |
| Phobius | 90 | 94 | 5 | - | – | |
| Phobius | 95 | 114 | 20 | - | – | |
| TMHMM | 96 | 118 | 23 | - | – | |
| Phobius | 115 | 134 | 20 | - | – | |
| Phobius | 135 | 158 | 24 | - | – | |
| TMHMM | 139 | 158 | 20 | - | – | |
| Phobius | 159 | 177 | 19 | - | – | |
| Phobius | 178 | 199 | 22 | - | – | |
| TMHMM | 178 | 200 | 23 | - | – | |
| Phobius | 200 | 238 | 39 | - | – | |
| Phobius | 239 | 258 | 20 | - | – | |
| TMHMM | 239 | 258 | 20 | - | – | |
| Phobius | 259 | 277 | 19 | - | – | |
| Phobius | 278 | 294 | 17 | - | – | |
| TMHMM | 280 | 299 | 20 | - | – | |
| Phobius | 295 | 300 | 6 | - | – | |
| Phobius | 301 | 318 | 18 | - | – | |
| TMHMM | 301 | 318 | 18 | - | – | |
| Phobius | 319 | 337 | 19 | - | – | |
| Phobius | 338 | 359 | 22 | - | – | |
| TMHMM | 338 | 360 | 23 | - | – | |
| Phobius | 360 | 409 | 50 | - | – | |
| Phobius | 410 | 433 | 24 | - | – | |
| TMHMM | 410 | 429 | 20 | - | – | |
| Phobius | 434 | 438 | 5 | - | – | |
| Phobius | 439 | 458 | 20 | - | – | |
| TMHMM | 439 | 461 | 23 | - | – | |
| Phobius | 459 | 464 | 6 | - | – | |
| Phobius | 465 | 483 | 19 | - | – | |
| TMHMM | 474 | 496 | 23 | - | – | |
| Phobius | 484 | 488 | 5 | - | – | |
| Phobius | 489 | 507 | 19 | - | – | |
| Phobius | 508 | 527 | 20 | - | – | |
| TMHMM | 528 | 550 | 23 | - | – | |
| Phobius | 528 | 550 | 23 | - | – | |
| Phobius | 551 | 584 | 34 | - | – | |
| TMHMM | 581 | 603 | 23 | - | – | |
| Phobius | 585 | 606 | 22 | - | – | |
| Phobius | 607 | 626 | 20 | - | – | |
| TMHMM | 623 | 645 | 23 | - | – | |
| Phobius | 627 | 647 | 21 | - | – | |
| Phobius | 648 | 658 | 11 | - | – | |
| Phobius | 659 | 685 | 27 | - | – | |
| Phobius | 686 | 708 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0179200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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