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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0180000 |
| Transcript ID | LotjaGi2g1v0180000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3; TAIR: AT1G34130.1 staurosporin and temperature sensitive 3-like b; Swiss-Prot: sp|Q9FX21|STT3B_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B; TrEMBL-Plants: tr|A0A1J7IAY5|A0A1J7IAY5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0180000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:60169097..60174633) extracted from Lotus japonicus Gifu genome v1.2.
CCTCTCACCCTAGATCCCCAATGGTCGCCACCACCACCACCTCTGCAAAACCCGCTTCATCTCCAATGGATCTCCTTCAC TCCCTCTCCCTCCCTCAATCCCTCAAGTTCAAAACCAAGCAACAAGAGCTTCTCCTCCGCGTCACCACTCTCACCCTCAT CTACATCCTCGCCTTCATCACGCGCCTCTTCAGCGTCCTCCGCTACGAATCCATGATCCACGAATTCGACCCTTACTTCA ACTACCGCACCACCCTCTACCTCACGCGCCACGGCTTCTCCGAGTTCTGGAACTGGTTCGACTCCGATTCATGGTACCCC CTCGGCCGCATCATCGGCGGCACGCTTTACCCTGGCCTCATGCTCACCGCCGCCGCTCTCTACAAAATCCTCCACTTCCT CCGCTTCGCTGTTCACATCCGCGAGGTCTGTGTCCTCACCGCGCCGTTCTTCGCCTCCAACACCGCCATCGTCGCGTACT TCTTCGGGAAGGAGATTTGGGACTCCGGTGCTGGGATCGTCGCCGCCGCGCTCATCGCGATCTGCCCTGGATACATCTCG CGCTCTGTTGCTGGGTCGTATGACAATGAAGGGGTGGCGATCTTTGCTCTGCTTCTCACGTTTTACCTGTTTGTGAAGGC GGTGAACACTGGGTCGCTGGCGTGGTCGCTGGCTTCGGCGTTTGGGTATTTCTACATGGTTTCGGCGTGGGGTGGTTACG TTTTTATCATCAATTTGGTGCCGCTTTATGTGTTGGTGTTGTTGGTTACTGGGAGATACTCGTTGAGGCTTTATGTTGCT TATAATTGTGTGTATGTGTTGGGAATGTTGCTTGCCATGCAGATTAGGTTTGTGGGGTTCCAGCATGTTCAATCTGGGGA GCACATGGCTGCTATGGGAGTGTTTTTCCTGCTTCAGGTTACTTGCATTCACCTTGTTGAGTTTATTTTTATCAGTTTTT AGAAATGGTAGAGAATTTTATAACAAGCTTCTTGCTATATTGATGTGTGTGCATGTGCTTTGAGGAGCTTGGATTGGGTA TTTTAAGTTTGTGGTCCTACCCTTGATGGGAAAGAAAAGGGGGAGGGGGTTGATGTATGGTTTAGTCTTCAATAACTGGT TTGTCTTGGGAGATTTAGCTTCTCTGTCAGGGGTTAATTCAAGTTTGATTTGGGATTAATGTATATGCAAACAAAAAGAA ATTGTTGTTGGGATGAATCCTTACTTTGAGTGTCTCTCATTTCACTATTCGGAAACCCCTTTTTTCTGTAATTATTTGTA AAATGTAGTTATAGTGTTTGCTTTATCTATACTTGCTTGGGTGATGTTAAATTATGTGAAGAAATAGCTTTTGTAGGTGG GTGGTTTTGGCTAGTTGGCTTGTTTTGTAGTATTGGGAAATGGTTTTTGTTGTTGCAAAATTTTGTGATAATGTGTGATT TGCTTACTGTGGATTCAACCGGATCAGTGCATCTGTTTATTTGTTTAATTAAGTTAGCATGGGGGATCTATTATGGCACT GACTTGGATTGTTTTCCAGGTGTTTTTCTTCTTGGACTATGTAAGGCATTTGCTTGGTGATAAAAAGTTGTTCCAAGCAT TTTTGAGGATCACCGTAACTGGTGCAGTCGGTGTTGGTGCCATTGCCTTGGGAGTGGGCACAGCAACTGGTTTTATTTCT CCATGGACTGGAAGGTTTTACTCCTTGCTTGATCCAACGTATGCTAAGGATCATATTCCAATTATTGCATCTGTCTCTGA GCATCAGCCTACTGCTTGGTCATCCTTCATGTTTGATTTCCATATCTTGTTGTTCCTTTTCCCTGCTGGGCTCTATTTTT GCTTCAAGCGCTTGACTGATGCCACAATCTTCATAGTTATGTATGGTCTTACAAGCATGTATTTTGCTGGTGTTATGGTT CGGTTAATTCTTGTCGCTACCCCTGCTGTATGCCTCATTAGTGCTATTGCGGTTTCTGCCACTGTGAAGAATTTGACTCA GGTGGTGAGGGCCAAAAGCCAGGCTGGTCAAAGTGGATCTAGTAAAGGAACTAGTACTACAAAAGGTTCTTCAAAGGTTA GATTTTTTGGAGTAATTAGTTGAGCAAAGGGCTTATCCAGACTTGTTTCATTCTACTCTTTTTATCTTTTGTCTCTCCTT TTTAATTGCTTGCTACTAGTACCAATAAATAGTGTGCCTATCTTTTGTGCCCACTTGTTGCATTTTAGTTATTATATAGG AAAGGTGAATTGGATTTTGCTTGATATTTTTCAATAATATTACTCACATGGATACTGCTGCCTGACATAAAGTTTGGTCA TAGCCATGTTTTTCATGGTAATTGCCATGCCATATATACTGACTTCATTAGTTCATCTTTTATCAGCTACACTCTTGAAC AATGCATTCGGATAGTGTTTTTGTCTCTTAATTTATGCAAGAAACCGTTTTCATGTCAAATATTATTTTAAATGGTGATG TAGCGATTTTAATACTTTATGATTACATATATACAGGGTGTAATTGATAATTCCCAGCCTTTCCAAAAGAACGGTGCTAT GGCGTTACTTCTTGGTGCTTTTTATCTGCTCAGTAGATATGCTATTCACTGTACTTGGGTCACATCTGAGGCTTACTCAT CTCCCTCAATTGTCTTGGCTGCAAGGGGTGCCCATGGCAACAGGGTCATCTTTGATGACTACCGTGAGGCTTACTTTTGG CTTCGACAGAATACACCACCAGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAG AACAGTTATTGTTGACAATAACACTTGGAACAATACACACATAGCTACTGTTGGGCGTGCAATGTCATCTTATGAGGATG AGGCTTATGATATAATGAGATCGCTTGATGTTGACTATGTATTAGTCGTGTTTGGTGGTGTTACTGGTTATTCTTCTGAT GATATTAATAAGTAAGGCTACCTAAACTAATGCACTTTACTTTTACATCCATTTTTACTTAATTCATGTACCCATTTCTT TATGTGAAATGATACTTAGTCAACCATTGCATACACAGCTTTGCCTTGCACAGGTAGCTCCATTCTAGTTGTTGAGAATA TTATAGCTTTTTTAAGTGATGTGATTGTGAACTCTAACTTAGAGCCTTTTGTTTGGCACTCATGTGAGTGCAAGGGGTCT GTAGGTAGCATCACTCTTTCTCTATTTTTGGGATTGATCATTTTATTTTCAAAAGCTGGTGTATTATTCTTTAGTCTGTC CTTATCCTTTATTTGTTTCTTACCATCTCCTTTCATATCTCTTGTGCATACTATCTCTTCATATTCCTTAGAAAATTTTT TTTTAATAGGAAACATCATCAAGTTGGTGCATATTGGCAGACTATTTTGATATAAATAGGAAAGGGAAAACTTGGGTCAA ATATATTTGTCTCATGGTTTCTTCAGTAGTTTTTGTGTCTTGTGGCATGCAAAAATATATCCCCACGTTTCTAATTGCGT GATCTTTCCGTTGCTAAACTTTTTTCATTTACAAATATGTAAATCTTCTTGTCCTGGATATTGACGCTTCTGTTATCCCT CTGATTTTTTATTTCTCGATTGCTATCATTTGAATAAGTATTTCTCTGTTTTGCCTGCTTTAATGCTTCCAACATTTTTG TAAGAAATACCTACTTTTTGTGTAGATTTCTATGGATGGTGAGAATTGGTGGTGGAGTTTTTCCTGTAATAAAAGAACCT GATTACCTTGTCAATGGGGAGTATCGTGTGGATAAAGGAGCAGCTCCCAAGATGTTGAACTGTCTCATGTAAGTTTCTAG CGCTATTACTTGGGCTTGGTATTTAAGTTATTGTCGAAGTCGCAACAACTCTATATGCCTACAACTGTACCAGTGTTTGG GTTTGGAATAAAACTATTAACCAAAGTTGGCTGATATGATTTATGCGATAATAGGATGATATAGTTGAACTTTAACTCTT TAGGCCACTGACACTGAGGTTTAACTTTGTTATGTTAGAGTAATTTTCTGTTCTCAATGCATTTTGCATTACCATTTACT ATACTGCTCGAGTATATTACTATGCACTGCTACTTGGATTATGTTATGAGTGAGTTAGACAACTCAGTATGACAGCTGTT AGTGTAACTGCCATCTGTTAAGGCAGTTACACTTGGTTCCGTGTAGAAATAGCCACTCTTTTACTCCATTTAAATGTAAT GACAGGAGAATTAACATCTCTGAAATCTCACTTGCTTTTCAAAATTTTCTCTCATTTTTTCTTGCCTCTTTCTCATTAAA CTAGGTAGGAATCCCTGTGCTATGTTTATGGCCTTATCTAGTAGGTGCCATTTTCTTAAGCAAAAAAAAAGTAACAAAGA AGGAAAATGATCAGGATTTCAGAATGACAGTATTTGCTGATATTTCGGTATAAAGACACTTGCTGAATTGATACATGGTG ATTTAATTAGATGTTCTCTTCATCTATCATTCTTAGGTACAAGCTGTCTTATTATCGGTTTGGGGAGCTGACAACAGAAT ATGGCAAACCACCCGGGTAAGTTCCATGGCCCTTGTTGTTGTTATACATAATTTAACAAATTCACACCATATAATCTAGG TGTCCTTACTAATAGGAACCCTATATTATTTGTCATTATGTTTCAGTTAGCATGATTAGACTGAAATTAGCAATTGCTGA TATATCCTCACAAATATGCAACTAGTCTGTTTAGAATTTACCTATGCACCCATTTCCTTAATTTAAGGGTAGGAAATGCA ATTGTACATTCATGTTATTGACAGAGGGAATATTAAGAACCAATGCACCTATTTCCCTGATTTAAGTGTGGAAAGTGCAA TTATACATTCATGTTATTGACAAAGGGAATATGAAGAATCTATGCCACATGATTAGCTATATGGAAATTGGAAATCATGC TTGTTAAAAATACTGAAATGTTATCAATTTTTTGGAGTTAAATAAGTTTCTAATTCTTAGAAAAAAAGCCCGAGTATGTT GTGCATAAGCTTGGGTAGAGTGTCCCTTGTAATGTTATCGCATTTCCAAAGACATTAATGGACTTGAATGAGGTTTTCTA ATTGGCCTGGTAGTAATTTGTGAATATTATATACATGGGTGTAAACAATGTTCTGTATTCTAACATAGAGAACTCAGTAT TTATTTGTGATAAAACTACCTTTGTTGAACTGTTTTTTTACTTGAATTTTTTTTTTACAAAATGGGAAATAATAACCGTA CATGGACAAGTGTTTGCACAGATATTTTTTGTTCTGTTCTGATTAAAGTGATGTACATTTTTTTGTTTATAATTACATTA TTACATTACAGCTATGATCGTGCAAGAGGTGTTGAAATTGGAAATAAGGACATAAAGCTGGAGTACTTGGAAGAGGCGTT CACTACCCAAAATTGGATAGTTCGTATTTATAAAGTGAAACCACCTAAAAATCGGTGGTAAGGCCAAACTTCAATCCCCC CAACTTCCTCACAGCCT
CDS sequence (LotjaGi2g1v0180000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCGCCACCACCACCACCTCTGCAAAACCCGCTTCATCTCCAATGGATCTCCTTCACTCCCTCTCCCTCCCTCAATC CCTCAAGTTCAAAACCAAGCAACAAGAGCTTCTCCTCCGCGTCACCACTCTCACCCTCATCTACATCCTCGCCTTCATCA CGCGCCTCTTCAGCGTCCTCCGCTACGAATCCATGATCCACGAATTCGACCCTTACTTCAACTACCGCACCACCCTCTAC CTCACGCGCCACGGCTTCTCCGAGTTCTGGAACTGGTTCGACTCCGATTCATGGTACCCCCTCGGCCGCATCATCGGCGG CACGCTTTACCCTGGCCTCATGCTCACCGCCGCCGCTCTCTACAAAATCCTCCACTTCCTCCGCTTCGCTGTTCACATCC GCGAGGTCTGTGTCCTCACCGCGCCGTTCTTCGCCTCCAACACCGCCATCGTCGCGTACTTCTTCGGGAAGGAGATTTGG GACTCCGGTGCTGGGATCGTCGCCGCCGCGCTCATCGCGATCTGCCCTGGATACATCTCGCGCTCTGTTGCTGGGTCGTA TGACAATGAAGGGGTGGCGATCTTTGCTCTGCTTCTCACGTTTTACCTGTTTGTGAAGGCGGTGAACACTGGGTCGCTGG CGTGGTCGCTGGCTTCGGCGTTTGGGTATTTCTACATGGTTTCGGCGTGGGGTGGTTACGTTTTTATCATCAATTTGGTG CCGCTTTATGTGTTGGTGTTGTTGGTTACTGGGAGATACTCGTTGAGGCTTTATGTTGCTTATAATTGTGTGTATGTGTT GGGAATGTTGCTTGCCATGCAGATTAGGTTTGTGGGGTTCCAGCATGTTCAATCTGGGGAGCACATGGCTGCTATGGGAG TGTTTTTCCTGCTTCAGTTTGTGGTCCTACCCTTGATGGGAAAGAAAAGGGGGAGGGGGTTGATGCATTTGCTTGGTGAT AAAAAGTTGTTCCAAGCATTTTTGAGGATCACCGTAACTGGTGCAGTCGGTGTTGGTGCCATTGCCTTGGGAGTGGGCAC AGCAACTGGTTTTATTTCTCCATGGACTGGAAGGTTTTACTCCTTGCTTGATCCAACGTATGCTAAGGATCATATTCCAA TTATTGCATCTGTCTCTGAGCATCAGCCTACTGCTTGGTCATCCTTCATGTTTGATTTCCATATCTTGTTGTTCCTTTTC CCTGCTGGGCTCTATTTTTGCTTCAAGCGCTTGACTGATGCCACAATCTTCATAGTTATGTATGGTCTTACAAGCATGTA TTTTGCTGGTGTTATGGTTCGGTTAATTCTTGTCGCTACCCCTGCTGTATGCCTCATTAGTGCTATTGCGGTTTCTGCCA CTGTGAAGAATTTGACTCAGGTGGTGAGGGCCAAAAGCCAGGCTGGTCAAAGTGGATCTAGTAAAGGAACTAGTACTACA AAAGGTTCTTCAAAGGGTGTAATTGATAATTCCCAGCCTTTCCAAAAGAACGGTGCTATGGCGTTACTTCTTGGTGCTTT TTATCTGCTCAGTAGATATGCTATTCACTGTACTTGGGTCACATCTGAGGCTTACTCATCTCCCTCAATTGTCTTGGCTG CAAGGGGTGCCCATGGCAACAGGGTCATCTTTGATGACTACCGTGAGGCTTACTTTTGGCTTCGACAGAATACACCACCA GATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACAGTTATTGTTGACAATAA CACTTGGAACAATACACACATAGCTACTGTTGGGCGTGCAATGTCATCTTATGAGGATGAGGCTTATGATATAATGAGAT CGCTTGATGTTGACTATGTATTAGTCGTGTTTGGTGGTGTTACTGGTTATTCTTCTGATGATATTAATAAATTTCTATGG ATGGTGAGAATTGGTGGTGGAGTTTTTCCTGTAATAAAAGAACCTGATTACCTTGTCAATGGGGAGTATCGTGTGGATAA AGGAGCAGCTCCCAAGATGTTGAACTGTCTCATGTACAAGCTGTCTTATTATCGGTTTGGGGAGCTGACAACAGAATATG GCAAACCACCCGGCTATGATCGTGCAAGAGGTGTTGAAATTGGAAATAAGGACATAAAGCTGGAGTACTTGGAAGAGGCG TTCACTACCCAAAATTGGATAGTTCGTATTTATAAAGTGAAACCACCTAAAAATCGGTGGTAA
Protein sequence (LotjaGi2g1v0180000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVATTTTSAKPASSPMDLLHSLSLPQSLKFKTKQQELLLRVTTLTLIYILAFITRLFSVLRYESMIHEFDPYFNYRTTLY LTRHGFSEFWNWFDSDSWYPLGRIIGGTLYPGLMLTAAALYKILHFLRFAVHIREVCVLTAPFFASNTAIVAYFFGKEIW DSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWSLASAFGYFYMVSAWGGYVFIINLV PLYVLVLLVTGRYSLRLYVAYNCVYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQFVVLPLMGKKRGRGLMHLLGD KKLFQAFLRITVTGAVGVGAIALGVGTATGFISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLF PAGLYFCFKRLTDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTQVVRAKSQAGQSGSSKGTSTT KGSSKGVIDNSQPFQKNGAMALLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPP DAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMRSLDVDYVLVVFGGVTGYSSDDINKFLW MVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEA FTTQNWIVRIYKVKPPKNRW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| PANTHER | 31 | 739 | 709 | 0.0 | – | |
| Phobius | 37 | 57 | 21 | - | – | |
| TMHMM | 37 | 59 | 23 | - | – | |
| Pfam | 41 | 526 | 486 | 1.9E-118 | ||
| Phobius | 58 | 103 | 46 | - | – | |
| TMHMM | 102 | 124 | 23 | - | – | |
| Phobius | 104 | 124 | 21 | - | – | |
| Phobius | 125 | 135 | 11 | - | – | |
| TMHMM | 131 | 153 | 23 | - | – | |
| Phobius | 136 | 156 | 21 | - | – | |
| Phobius | 157 | 161 | 5 | - | – | |
| Phobius | 162 | 180 | 19 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 181 | 191 | 11 | - | – | |
| Phobius | 192 | 217 | 26 | - | – | |
| TMHMM | 192 | 214 | 23 | - | – | |
| Phobius | 218 | 222 | 5 | - | – | |
| Phobius | 223 | 246 | 24 | - | – | |
| TMHMM | 229 | 251 | 23 | - | – | |
| Phobius | 247 | 257 | 11 | - | – | |
| Phobius | 258 | 277 | 20 | - | – | |
| TMHMM | 258 | 280 | 23 | - | – | |
| Phobius | 278 | 288 | 11 | - | – | |
| Phobius | 289 | 306 | 18 | - | – | |
| TMHMM | 290 | 307 | 18 | - | – | |
| Phobius | 307 | 326 | 20 | - | – | |
| Phobius | 327 | 352 | 26 | - | – | |
| TMHMM | 330 | 352 | 23 | - | – | |
| Phobius | 353 | 388 | 36 | - | – | |
| TMHMM | 386 | 408 | 23 | - | – | |
| Phobius | 389 | 408 | 20 | - | – | |
| Phobius | 409 | 414 | 6 | - | – | |
| TMHMM | 415 | 437 | 23 | - | – | |
| Phobius | 415 | 437 | 23 | - | – | |
| Phobius | 438 | 740 | 303 | - | – | |
| Gene3D | 542 | 692 | 151 | 1.2E-37 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oligosaccharyl transferase activity | Catalysis of the transfer of a oligosaccharyl group to an acceptor molecule, typically another carbohydrate or a lipid. | ||
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi2g1v0180000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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