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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0180600 |
| Transcript ID | LotjaGi2g1v0180600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G41750.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|F4KIF3|CSA1_ARATH Disease resistance-like protein CSA1; TrEMBL-Plants: tr|A0A0R0EJ32|A0A0R0EJ32_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0180600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:60265990..60271106) extracted from Lotus japonicus Gifu genome v1.2.
AGCCTATATATGGTTTAGTACAAAGCGTGTGTGAAGAGAACAAATTTCCTGTGAGTTTCTACAATAACTGACAGTTTTTT GTCAATAAGTCAGCAAATTTATTACCATATACCAGTGAATACAATGAATCACACTGTTACACGAAACAGACAAGACACAG GAAAATGTATAGAAATTTCGGGCTCCTGCAAGGCTGCAACACGTTGAGAACATAACATTCATTCTCTTTTTATATGGCAA TCAGGTTCGTGCTCACTCATACACACCATTCATATTCCACACTTATCATTCCAAGCCTTCTTTTCTCATGGCTTTCCTAC CATCATCATCCTCCTCTTCCATCACCTATGCATTCACCTACGATGTGTTCATCAGCTTCAAGGGTTCTGATACCCGCTAT GACTTTACCGGCAATCTCTACAAAGCTCTCTATGGTAAGGGAATTCACACTTTTATTGATGACAAGGAGCTTCACAAAGG GGACGAAATCACACCATCACTTGAGAAGGCCATTCAAAACTCCAGGATTTTCATTGTTGTCCTCTCTAAGGACTATGCGT GCTCCTCATTTTGCTTAGATGAACTTTCCAAGATTCTTGACTGCTCTCAGGAAGAGGGTCGTCTTGTTTGGCCAGTTTTT TATGGTGTGGATCCTTCTGATGTGCGAAAGCAAATTGGGACGTTCGGAGAAGCAATGGCCCTGCATACAGAGAGGTTCAA AGATAACAAGGACAAGTTGCAAAAATGGAGGATAGCTCTACAACAAGTAGCTGATTTGTCAGGCTGGCATTTCAAACATG GGTGTGTTTCTTATACTGATTTCCTTGCGTTTTAGATATTGTCTAATTATTACAAAAATTTAGTTATAGTGAATAAGTAA TAAAAAAAGGAACATGATGCACTATTATGACTTTACACAAACTTCACTTCTCTTATTGGACAGAGATGGATATGAACACG AGTTTATCGGAAAGATCATTAATGAAGTTTCAAGAAAGATGAATCGTGTTGCTTTACCTATTGTTGATTACCCGATTGGA CTAGAGTCACAAGTGCGACAAGTAGTTTCGCTTTTGGATGTTGGGTCTATTAATAGAGTTCACATGGTAGGGATCCATGG AATAGGGGGAATTGGTAAAACGACACTTGCTCTAGCAGTTTACAATTCCATTGCTGACCATTTTGAAGGTTTATGTTTTT TGGAGAATGTTAGAGAAAATTCAAACAAACATGGGTTACTACATCTCCAAAAGACCCTTCTTTTGGCTTTCCTTGGAGAG AAGGAAATTGAGATAACAAGTGTCAAGCATGGAAGTTCAATAATACAACATCGGCTCCAACAAAAAAAGGTTCTTCTGAT TCTAGATGATGTTGACAAGAAGGAGCAATTAAATGATATTATTGGAAGACCTAATTGGGTTGGTCCTGGTAGTAGAGTCA TCATCACAACCCGAAACCAACAATTGCTAGCATGCCATGGGGTTGAAATAACATACAAAGTGGAAGAGTTGACGAAGGAA GATGCTACCAAATTGTTCACATGGAAAGCTTTTAAAAACCAGGAAGTTAATTCAAGTTATGAGGACTTATTGAACCAAGC ATTGAGTTGTGCTTCCGGCCTTCCGTTAGCCTTGGAAGTAATAGGTTCTAACTTGTTTGGAAAAACAAGGGAAGAATGGG TGTCTGCATTAGAACAATATAGGAGGATTCCACTTGAAGATATCCAAAAGATACTTGAAGTGAGCTTTGATGCTTTGGAG GAAGAAGAGAAGAATGTTTTCCTAGACATTGCTTGTTGCTTCAAAGGATATGAATTGGGAGTGGTCAAGGACTTACTTTG TGCTCATTATGGTTTCTGCATAGCAAATCACATTAAGGTGTTGGTTCAAAAGTCTCTCATAACGATTACTCCGTATTTGA GTGAATTGACACTACATGACTTAATTGAGGATATGGGTAAAGAAATCGTGCGACAAGAATCACCTAAAGATCCCGGAAGC CGCAGTAGGCTATGGTCTCTTGAAGATATATTTGAAGTTTTGGAAGAAAATACGGTAAGACTAGTTCGGATGATTTGGTT GTTTATCTTTAATCTTTATTTAGCCTTTTTGATTATTCAAAGCTACTAATGTTTATATTACCATTTTCCCTCTTTATAAT ATTTCCAAGAACTTGTGTTAATGTCCTAACGTATATGTATTCATTTTGATTGATTTGTCTTTTTTTAAGGGAACAAGCAA AATTGAAATGATGCATCTAGATTACCCGTCATTTGAAGAAGTGGATTGGGATGGAGAGGCTTTCAAAGAGATGAAAAAAC TGAAAACACTTGTCATTAGAAAAACTCATTTTTCTAAAGGTCCAGAGCATCTTCCAAATAGTTTAAGAGTACTAGAGTGG TGGAAATACCCTTCACAACATTTACCAAGTGATTTCCGTCCAAAGAAACTTTCCATATGCAAATTACCCGAGAGTAGGTT TATGTCATTGGAGTTGCTAAGTTCATCAAAGGCAAGTATGATAATGATTCAATATCCTTGATCTTCTTGTGTATTATACA TCACTAATATTCATTTGATTTTTGTTTTCCTATTTTTCTTTTCTTTTTTAGCAGAAGTTCGTGAGTATGAAAGTCTTAAA TCTCAATCGGTGTGGATCATTAACACATATACCTGACGTATCTGGTCTCCCAAATTTAGAAGAGCTTTCATTTAAAGATT GTTCAAAATTAATTACGGTTGACTGTTCGGTTGGGTTGTTGGCCAAACTTAAAAGCTTGAATGCTCGTCATTGCTCCCAG CTTAGGAGTTTTCCTCCCCTCAAGCTGCCCTCTCTTGAAGAACTCGGGCTTGAAGGTTGTTCAAGTCTTGAGAGTTTTCC AGAAATATTAGAAGAGATGGAAAATATAAGTAAGCTTGATTTGAGTGGCACTAAAATAAGTAAATATCCACATTCATTTG GAAATCTGACTCGACTTCGATTAATGTGGGTTTATCACTTGCTGCCACCAAGGAGCTTAGACACGATGCCACAACTATTA TGGCACACAATCAATCAGCGGCGGATATGGGAAGAGGATAGCGAGAGTGAGAGTGAAGAAGAAGTGATGGATGGTGGAGC TATGGAATTAGTTCCGACATTGTTTCCTAACTTGAATGAAAAAAAGAGTTCCATGCTTTTGCCTTCAAAACTAGAACATC TTTTTCTCTATAAGTGCGACCTGTTAGATGAATATTTAGTATTAGTTCCCTTGTTCTTTCCTAACTTGAAAGAATTACAC ATAGAGGATTGTCCATCAATCACAGTTGAGCAACTTAGAGAAATTTGTGAGGGGATTTTGCCAAGATTAAACAAGTTAGT TGTATTCGGATGTCCATCCTTGAGTTCCAGTTGTAGAAGCATGTTGGTGAGGCAGGAACTGCATGAGGCTGTAGAAATTG ATCTTCAATTGCGAAACTTACAGATTCCAGAGTGGTATGAGCACCAGAACATGGGTCGATCTCCGTCACTTTCTTTCTGG TTTCGTAACAAAGTCCCTCTCATCTTACTATGTATTGCTTCTCCACCTTCGCCAAATATGCCTGACCATGATTATTCATG TGATTATTCACTCAGAGTAAATTCCTTCATCAATGGCTCTAAAGGTGAAAAATTTAGAGTAATTTGGGGTTGTACTCTTC TTAAGAGGCTAAGCAAAGACTACTTTGATACACATATGAGCGAAAGATGCAGGATATCAAAAAATGAGTGGAATCATGTG GAGTTTAGGACTGAAAGGGGCTTTGATTTTGGAATTGGAATCCATGTATTGAAAGAGCAAAACATGCAGGATATCCGATT CATCAATCCTTTAGACTTGAACTTGGCACTTAGAAGGATTACCCCTTGGAGTAAGTCTTGCTTTGGAGTGTATCATGCGA ATTCCTTGGAGTAAGTCTTGCTTTGCTTTGCCAAAGAGTTAGATCTGCATGCCTCACAAAACTCATCGTTTTGAGAAAAC TTAATTTGAATCATTGCAAGCTTTTTCTAGAAATTAGAAGGATTACCCCTGACTTAAAACATTCTATTCTATGTAAAAGG TCCAACTTCTTACTGCATACACCAAAGATTGTCCCTTCTCGAGGGAACCGATTCAGATTTAATGAAAACCAACATGGATT GACATCTCCAATGACATAGGTACAATATATTTTATCCTTCCTCTCCACCTGTTAAACTTTAGTTGTATTGTTCTTCGCTA TCATGTGATTGTGCTTTGATCACAATTAAACTCGGACTAAACCAAGTAACATAGTTAACACTGACAAAAATGGTTTTTAT GTAATATGGTATATCATTACCAAATGAGTAACTGCATTTTGATTACTTTTCCTTATTCTAGTGTGCTTTGAGTGTTACTA TCACTCTGTTTACTCATCTTTACTAGTCCCTTAACCTTCTCCTGTATATTCTGAACTAGATGGAGCAGTTGTGGACTCGG GAAAAGGCTCTTGTAAAATCTTCACAAGCCCTCTGGTTTCTTAAGATGCAAAATATTCAGGTCCCATGTCCCACTTTATC AAGTGACAAAGTTAGTGGAGACAACTGCACGTAAGAATCTGTGGCCGTAGTTTATCAACAACAATTGATGACTCTTTCAC AAAGCATATTGAACAAAGTCAACACATGATGTACTTGGAAGAATTTTATTTGGCTTCTTTAATGTTGGGACTCGTGTTAT TTGATGTTCCTAGTTTCCTCTGATAAATCATCAAGCATGGCAAATCGAAATACATTCAATGATGCTTCAGTTTTGTTCCC AATTTGTCTGTAGATGATGCATATCAGCAGACATGAGAACATTGATATGAGAAGCTTCATAGGAGTTCATCATAGTTAAA TTATTTTCACTGTTGAATTAGAACCAAAAAAATTGATAAGTTTTAGTCTTGTGCTTTAAAATTCATAATAAGCTTCTTTC TAGATGCATCCATATCAATGAGATTGTGCTTTTCATCTCATGATAAGATCTCAACTCACATGGAAACAAAACAATAAAAG AAAAAGCTGAATCTACTGTTTTTAAGTTGTTTGATATTTTAGGTCCAAAAATCTCCCTAGTCTCCATCCACACTGAA
CDS sequence (LotjaGi2g1v0180600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCATCTAGATTACCCGTCATTTGAAGAAGTGGATTGGGATGGAGAGGCTTTCAAAGAGATGAAAAAACTGAAAAC ACTTGTCATTAGAAAAACTCATTTTTCTAAAGGTCCAGAGCATCTTCCAAATAGTTTAAGAGTACTAGAGTGGTGGAAAT ACCCTTCACAACATTTACCAAGTGATTTCCGTCCAAAGAAACTTTCCATATGCAAATTACCCGAGAGTAGGTTTATGTCA TTGGAGTTGCTAAGTTCATCAAAGAAGTTCGTGAGTATGAAAGTCTTAAATCTCAATCGGTGTGGATCATTAACACATAT ACCTGACGTATCTGGTCTCCCAAATTTAGAAGAGCTTTCATTTAAAGATTGTTCAAAATTAATTACGGTTGACTGTTCGG TTGGGTTGTTGGCCAAACTTAAAAGCTTGAATGCTCGTCATTGCTCCCAGCTTAGGAGTTTTCCTCCCCTCAAGCTGCCC TCTCTTGAAGAACTCGGGCTTGAAGGTTGTTCAAGTCTTGAGAGTTTTCCAGAAATATTAGAAGAGATGGAAAATATAAG TAAGCTTGATTTGAGTGGCACTAAAATAAGTAAATATCCACATTCATTTGGAAATCTGACTCGACTTCGATTAATGTGGG TTTATCACTTGCTGCCACCAAGGAGCTTAGACACGATGCCACAACTATTATGGCACACAATCAATCAGCGGCGGATATGG GAAGAGGATAGCGAGAGTGAGAGTGAAGAAGAAGTGATGGATGGTGGAGCTATGGAATTAGTTCCGACATTGTTTCCTAA CTTGAATGAAAAAAAGAGTTCCATGCTTTTGCCTTCAAAACTAGAACATCTTTTTCTCTATAAGTGCGACCTGTTAGATG AATATTTAGTATTAGTTCCCTTGTTCTTTCCTAACTTGAAAGAATTACACATAGAGGATTGTCCATCAATCACAGTTGAG CAACTTAGAGAAATTTGTGAGGGGATTTTGCCAAGATTAAACAAGTTAGTTGTATTCGGATGTCCATCCTTGAGTTCCAG TTGTAGAAGCATGTTGGTGAGGCAGGAACTGCATGAGGCTGTAGAAATTGATCTTCAATTGCGAAACTTACAGATTCCAG AGTGGTATGAGCACCAGAACATGGGTCGATCTCCGTCACTTTCTTTCTGGTTTCGTAACAAAGTCCCTCTCATCTTACTA TGTATTGCTTCTCCACCTTCGCCAAATATGCCTGACCATGATTATTCATGTGATTATTCACTCAGAGTAAATTCCTTCAT CAATGGCTCTAAAGGTGAAAAATTTAGAGTAATTTGGGGTTGTACTCTTCTTAAGAGGCTAAGCAAAGACTACTTTGATA CACATATGAGCGAAAGATGCAGGATATCAAAAAATGAGTGGAATCATGTGGAGTTTAGGACTGAAAGGGGCTTTGATTTT GGAATTGGAATCCATGTATTGAAAGAGCAAAACATGCAGGATATCCGATTCATCAATCCTTTAGACTTGAACTTGGCACT TAGAAGGATTACCCCTTGGAGTAAGTCTTGCTTTGGAGTGTATCATGCGAATTCCTTGGAGTCCAACTTCTTACTGCATA CACCAAAGATTGTCCCTTCTCGAGGGAACCGATTCAGATTTAATGAAAACCAACATGGATTGACATCTCCAATGACATAG
Protein sequence (LotjaGi2g1v0180600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMHLDYPSFEEVDWDGEAFKEMKKLKTLVIRKTHFSKGPEHLPNSLRVLEWWKYPSQHLPSDFRPKKLSICKLPESRFMS LELLSSSKKFVSMKVLNLNRCGSLTHIPDVSGLPNLEELSFKDCSKLITVDCSVGLLAKLKSLNARHCSQLRSFPPLKLP SLEELGLEGCSSLESFPEILEEMENISKLDLSGTKISKYPHSFGNLTRLRLMWVYHLLPPRSLDTMPQLLWHTINQRRIW EEDSESESEEEVMDGGAMELVPTLFPNLNEKKSSMLLPSKLEHLFLYKCDLLDEYLVLVPLFFPNLKELHIEDCPSITVE QLREICEGILPRLNKLVVFGCPSLSSSCRSMLVRQELHEAVEIDLQLRNLQIPEWYEHQNMGRSPSLSFWFRNKVPLILL CIASPPSPNMPDHDYSCDYSLRVNSFINGSKGEKFRVIWGCTLLKRLSKDYFDTHMSERCRISKNEWNHVEFRTERGFDF GIGIHVLKEQNMQDIRFINPLDLNLALRRITPWSKSCFGVYHANSLESNFLLHTPKIVPSRGNRFRFNENQHGLTSPMT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 485 | 484 | 3.5E-91 | – | |
| PANTHER | 2 | 485 | 484 | 3.5E-91 | – | |
| Gene3D | 3 | 153 | 151 | 2.4E-18 | ||
| SUPERFAMILY | 4 | 350 | 347 | 3.74E-32 | – | |
| Gene3D | 154 | 242 | 89 | 1.8E-7 | ||
| Gene3D | 259 | 385 | 127 | 1.5E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0180600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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