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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0181600 |
| Transcript ID | LotjaGi2g1v0181600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Arf GTPase activating protein; TAIR: AT3G17660.1 ARF-GAP domain 15; Swiss-Prot: sp|Q0WQQ1|AGD15_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD15; TrEMBL-Plants: tr|K7LEB1|K7LEB1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0181600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:60341683..60345969) extracted from Lotus japonicus Gifu genome v1.2.
CCATCTCTATGTAAAGCCAACAAATAAAGTCATCAAAGGATGTTTTCAATGAACAATTCCAAAATCACAATTTTTCTCAT GGTCCATGATCGGCACTCACAAACAAAAACAACAGCAACAACAAAGTAGTTTCGTTTCCAAAGATCGTTGTTGTGGTTTC GTTTTCGTATGTCAACTTTGTGAATCTCGCAGTGATGGTTCGATGATTCTGGCGTGTAACGATGAACGAACGAAATTCCC GCGTTTTCCTCACCCAAAACCGCGTTCCCCTCTAAATCTGTGGAGCCACAAATAAACAAACCAATCCCAAAACGGATTGA AAATTCGTAGACCCTCTTTTGACCACACTTTCATTCTCCTTTCTTTCTTTCTTTCTGTGATTGTTTCACCTTCGCTGTGA TTCCGTGTGTGTCCTCGCCGCCACACAAGCAGGGAAGGTTTTGTAAACATGAACGGGAAAGCTTCCGTTTCGAAAGAGCT TCATGCTAAGCACGCTAAGGTTCCGTTTTTCTTCCACCCCTTTTCCTCTTTCATCATTTCCTATCTGGGTTTTGATGGGT TTTTCTTTTTCTTGCTTATTGCATTTTTTGTTTTGTTTAAGGTTTTGGCAATTTGGTAATTTAATAGCCTGTTTGGATAA TCTTCTTAACAAGAACTTGTAGTAGGGGAAATAAATTGAAATGTTGGTTTAATGGTTATTAGTATTTGATATGATAACTT CTTACTGCACCTTAGTTTTTGTAGAAATTGTATTGTTTAACTTATGCATAAGCACTTTTAATCTTATAAGGATTTTGTCA ATTGAAAATATTTCATGAGCTAAATGCTAATCCAAACTGGGCTTAGGTGGTGGATTAGGTGAAAGTGTGATACCTATGCT GGGGGTTTAAGAAACATTGGAATTGTATTGTGGGTTGGTTGATGCTTTTGTTTTTATTTTAATTTTGTTTCTTTTTGACT ATGCAGATTTTAGAGGGACTTCTTAAGCTGCCTGACAACAGGGAATGTGCAGATTGTAGGAACAAGTACGTGCTTTGAGA ACTGTTATTTTGTGTTAAGCATAGACATTGGTGTTTTTATACATCAAAGCTTCAAGTACAATAGGTGATTGAGTAGGTTT TTTTACTGTGAATACTTCTGCAACCTATATCCATATGTGGATTGGGCATCTCTTAATTCCAGCTATATAAAAGGTGTTTA ACTGGCTTCTAAGTTTTCGGCCCTTTTTGTTCACTTTATTGTTCCTGCTCTGATTTTGGTGGGAATTAACTTTGTGTCTC TATATTGATAATTCTAGAGGGAATAGGAGATATAGTATGATGAGAGGCATTTGTCTTGTGAACGAAAGCAAGAGAGTCAC ATTTCATATTTCAATAATATGTGTGCGCTTCAATTCAGTTTGTGTTTGGTATTGATTTTGCAAATATTTGCTTAGAATAA TAAGGTTTTTGTGGTTTATGGGACACAATTTTGATATTTCAGGGCACCGCGATGGGCAAGTGTGAACTTAGGAATTTTCA TTTGCATGCAATGTTCAGGGATTCACCGAAGTCTTGGAGTGCATATATCAAAGGTTTATAACTTTATATACATTTTTCTC ACTGTCTCAGTTTAGAATTTAGATATTGATAATGACTGAATCTTCTGATTTTGCGACTAGGTGCGGTCCACAACTTTGGA TACATGGTTGCCAGATCAAGTTTCTTTCATGCAGTGTAAGAAACTATAAAATCCGTTTCTTATTTTCTTAGTCAAAAATA TGACTAAGCAAATCATGAGATGCTATGAAAATTCTCTCTCTCTTCCAGTATTAGGTAATTTAATTTTTCACTAAATGGCT AGATAATAGCTACTGATTAGTTTCTTGATTTGTGGGTTTTATGCAGTGATAGGTAATGCGAGGTCAAATAAGCACTGGGA GGCAAAACTGCCACCAAACTTTGACAGCAATGGATATGGAATCGAGAAGTTTATAAATGCCAAGTAAACAGTTATTGGAT TCTTATACATGACATTACTTGAATGTGGAAGATTAAGTATTCATCCACTTTCCTATTTTCTATTATTATTAATTCTCTTA GGATCTTTTAGGTACGTGGAGAAAAGATGGGCTTCGCAAGGTGAGTTTCTAGCAGCATTAAAGTCAGCTGACCCAACCTT TAACTTGAATGAGTCCCCAGAAGTTGGGGCCAAGAGTGGTATTCAAAAAAATAGGAGATTGTCCCTTGATGAAAGCATTC TTGTTGACCATATGGCGCGAATTCGGCCTCCTGTAGCTAAACCTCTAGAGGTATTCATACTTTACATTGAGTTACCATTA TAAAGAATTTCCTTTCATATTTTAATTGCACAGCTACATTTTCAGTGGATCGTTTGATAAACCGGTCACATGATGCTCAA TCGTTGAGCAAGTGGCTTATCATTTGGTCTTCATGTGATCCTGTAACTCTTTTGCCCTATTTCTTACCAAATTGTTATCT ACTTTGCTTGAACTCATATACTCTTAAATCTTAAGATGTTATTATCTGTCACGGAAACGTCTGTATTTCTATTATTTTTT TCTTTTGCAAGGCATGGTAGTATGCAATGAAACCATTAGTTTTGCTTCTGATTTCAAAATCCTCAAAATTTCTTATTCCT TGCCCTATGGCCCTTGTAAGGTGTATTGTATTAAGTTATCCATTTAGTCAACACACATGTTTAATCAGAAAAAAGGAACG TGGAAGGTAGTGGGAGGATTATGGTTACAGTCTCTAGTAGCCCGGCACAATTTGCATTTTGTATTCTCTTTTCCCCTTTG CCATCACTTTATTCTTTCTCTGCCATGTTTACCCAGAAAATCAAAATTCAATTTGAGGTTGATCTTTTCGATTCAGGGGT CCTTAGATATACATAAGAAGATTTCACCACCATTGAAGAGGCCATCTGCATCAGTTGATTATGGTAACCGTATTGAAAAG AGCAATGGTACTGTTGATCTTTTTGGCTTGCTTTCCATCCATGATGATAAGCAGGGTTTCTCAACTGCACCTCCTCCTAG TTGGACAACATTTGATTGTAAGATGACAATACTTCTATCACACATCTTCATAATCATTCTTCTATTTTCTTTTATTCCCT TGATATTGGAACAAGAGTTCTTGGAGAATAATAGAAGCTACTGAGGATGTGGCATTTTACATCAAATTATTTTGTCTAGA TAAATTTGAAGCTGTTGAAACTTTTCTTCACTTCAGCAAGTTCTTTCTTCTGCTAATATCCTTGCACTCTTGTTGCATTC ATAATGAAACTATGAACTCAGAAAATAGGTGCAGTTCATGTTATGCATTTCCAAGTTATTAAACCAGAATTTATGTTTGC AGGAGAAGGCGCGTAGGGTGTTAGTTTATATATTGTTGAGCTCTCTCTTTGGGTAGATGTCACAACTCATAATATCACAG TTACAGACATTCTTGCAGCCTTGCACGAACATTGAGCTGCATTTGACTGGTGTGTACTTTTCATTCCAAATTTAACAATG CTAATTTGATGTTTTTCTTAGTTTCCACGTTTTGATGATCCTCATGTTTTTGTACATTCACCTAAAATCAAGACTAGACA TGGTTTTTGGCCTCGAATCTGCCCAACATTTATTCTGAGTTATAACTGTACTTCCTATTTTTAGTGCAAAAGGTCTTTTT TATTTTGTTCTGTATATACATGACATATCACACATGTCCTGAAAGTAGTTTATAAAAATTGTGTTTCACAGGTTTGAGGA CAAATTTTTCAATTAACACGGGCTGGAGCAAGATATAACTTAGGCGCTCATCTGCAACACTTTGTCAACTAAATGGTTTG ATTTTCATTGTTGGTCATATTACTTAATTGAAAAAACAGTTACTGATTCAGGTGAAGAAAGGGATCTAGGAAATTAGAGT TGTTAGCCTTTTCATCTTTCAGAGTCTCACTGGAAGAGGTTGTAGTTGAAAGATGCCCTGCTTATTTTTATTCTTCTTTT ACTAGTGCGCCCTTTTTAGTTTTTTATTTTATTTTAAATTTGGGTCCAACCTTTTCAGTTTATATCAGAGTCTAAATGTA ACGTTCCCATGAACCCAAGAAATATCAGTGTAAATGTACAGCAGCCAACTTGTGCATTGAACTTGGATTGCATAACAATG GTTTGATATGTTCAGAAAAAAGGGATGTGCATAAGTTAAACCAATTCAGTAAGAAAATTGATCCAAAAAACCATGAATAA GTTAAACAAAAAATTGGACAAACTGATAAGTGGAAAACTGATCGTTG
CDS sequence (LotjaGi2g1v0181600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACGGGAAAGCTTCCGTTTCGAAAGAGCTTCATGCTAAGCACGCTAAGATTTTAGAGGGACTTCTTAAGCTGCCTGA CAACAGGGAATGTGCAGATTGTAGGAACAAGGCACCGCGATGGGCAAGTGTGAACTTAGGAATTTTCATTTGCATGCAAT GTTCAGGGATTCACCGAAGTCTTGGAGTGCATATATCAAAGGTGCGGTCCACAACTTTGGATACATGGTTGCCAGATCAA GTTTCTTTCATGCAGTTGATAGGTAATGCGAGGTCAAATAAGCACTGGGAGGCAAAACTGCCACCAAACTTTGACAGCAA TGGATATGGAATCGAGAAGTTTATAAATGCCAAGTACGTGGAGAAAAGATGGGCTTCGCAAGGTGAGTTTCTAGCAGCAT TAAAGTCAGCTGACCCAACCTTTAACTTGAATGAGTCCCCAGAAGTTGGGGCCAAGAGTGGTATTCAAAAAAATAGGAGA TTGTCCCTTGATGAAAGCATTCTTGTTGACCATATGGCGCGAATTCGGCCTCCTGTAGCTAAACCTCTAGAGGGGTCCTT AGATATACATAAGAAGATTTCACCACCATTGAAGAGGCCATCTGCATCAGTTGATTATGGTAACCGTATTGAAAAGAGCA ATGGTACTGTTGATCTTTTTGGCTTGCTTTCCATCCATGATGATAAGCAGGGTTTCTCAACTGCACCTCCTCCTAGTTGG ACAACATTTGATTGA
Protein sequence (LotjaGi2g1v0181600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNGKASVSKELHAKHAKILEGLLKLPDNRECADCRNKAPRWASVNLGIFICMQCSGIHRSLGVHISKVRSTTLDTWLPDQ VSFMQLIGNARSNKHWEAKLPPNFDSNGYGIEKFINAKYVEKRWASQGEFLAALKSADPTFNLNESPEVGAKSGIQKNRR LSLDESILVDHMARIRPPVAKPLEGSLDIHKKISPPLKRPSASVDYGNRIEKSNGTVDLFGLLSIHDDKQGFSTAPPPSW TTFD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 244 | 244 | 4.5E-114 | – | |
| PANTHER | 1 | 244 | 244 | 4.5E-114 | – | |
| Gene3D | 3 | 130 | 128 | 4.5E-48 | ||
| ProSiteProfiles | 16 | 124 | 109 | 26.044 | ||
| SMART | 16 | 129 | 114 | 1.2E-38 | ||
| SUPERFAMILY | 16 | 125 | 110 | 3.92E-43 | ||
| Pfam | 17 | 127 | 111 | 1.4E-40 | ||
| CDD | 19 | 119 | 101 | 9.34863E-60 | – | |
| PRINTS | 28 | 47 | 20 | 1.5E-21 | ||
| PRINTS | 47 | 64 | 18 | 1.5E-21 | ||
| PRINTS | 68 | 89 | 22 | 1.5E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
Expression pattern of LotjaGi2g1v0181600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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