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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0182500 |
| Transcript ID | LotjaGi2g1v0182500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycosyltransferase; TAIR: AT1G14590.1 Nucleotide-diphospho-sugar transferase family protein; Swiss-Prot: sp|P0C042|Y4597_ARATH Uncharacterized protein At4g15970; TrEMBL-Plants: tr|G7KM25|G7KM25_MEDTR Nucleotide-diphospho-sugar transferase family protein; Found in the gene: LotjaGi2g1v0182500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:60512463..60519203) extracted from Lotus japonicus Gifu genome v1.2.
CGAAATTAGAAATCACAAATCATCAAATTAATTACTACTACCAGTTTTCTATTGCAACTTGCTTACTACTATTATTAGTT TTCTATTGCAACTTGTTCTCACTCTTTCTTCTCTGTTTTGTCTCACACAAATAATGGAAATGCAAAGTTAATGCATTCGA AACCGTTTCATTTCATTTTCAATTCCAAACCCGTCTTTGAATTTGTTTCTTCTCACATCACACCCTTGATCATCATCATC ACAAATCTCCAAGAGTGTAGCAAAACAAACAGCTTTGGAAACTCCTCTGCCTTTTTTGTAAGCATTCGATTTCGACACAT AAATCCAAACGCTGTGTGCTGATGCTGGTGGTGATGAAATCAAGGAAGCTTATGCAGTAAGAAATAGCTTATATACAAGT GGGTCTGATTCACAACAAGCCAGAGAGGTTTTTGAAATTGCTGATTCAGGTGGTGAAAAATGAAGGAAATCGCCGCCGCT GCTGCTGGTGAATACGCCGTTGTCGTCGTGGCTGATGGTGGCAAGGCATGGAATTCTGGTGGAGCCTCCGGCAGCCACCT TTTGGTGAGGAGGGTCATGCAAGTCGTGATGTTTGTTGTTGGTTTTGGTGTGTTGTGGATGTTTCTGTACAACTCTGCTT CTCCTCTGGGATTCCCTGCCATCTCACACTACTACTCATCAAAGGTGAGTGACTCTCTTTCTCTCTCTGTTTTTGTGTCT TTTGCAATTGGAATTGGGTGAGAACAGGGAATAATAATTTGGAGGAGTTTTAGAATTCTGGGTTTTTTGGATTTTGATGC TTGAATCTTTTTAATTTTTGAGTTTTGATGCTATTCTTAGTTCAACTTTTGCTTTTGATTGGTTTTGAACCAAACTTTTC CTTTATTGGGTCAATTTGGATTTTGCATGTCAAACTTCGACTATTTAGACCCAACAAGTGCAGGTTACAGTGATAAAAAA TAACTATTTAACTTTTAGGTTACAAGTTCGATTCGTATCATAGAAGCTGCAAATACTTTTGCCCTTCACCAATGTTTATG GGTTAGGTTGGTATGCATTTTGCCGTTTTCGTTTCATGTTTGATCAAGCAAAATAGCAACCTTTTATTTCTGCTATAGAG ATTCATGAGTTGAAGCATGATCTTGCTCATATAGAAGTTTATCCATTATTCAAGTGAAACATTACTTCTTGATGAAAATG CCTAGCAATTTCAGGGATTTTTGGGAGATAGACAGATAGTGATGTTTATGAATTTATTACTATGAGAAAAATGGGGGAGG AAATAAATGGATAGTGGAGGGTGGGGACTATTTCCAATGCTTGATGACAAAAAGATTACACAATTGCTGATTGGACATGC ATCTCATTCAGTTGACTCTTTGGGTAAAATTTCCGGATTTTACAAATTGTAAATTTGGCACTATTAGGAATTGTTAAATG ACACTTCTCTTTCAAATAGCCCTTCAAGTATTGTGAAAAATGGAATATGCCAATATGGGAAATTTATTTCAAGCACAAAT CTTATCTGAAAAAGGTATAATGCACTATGTAAAGATGTATTCAGTTGAATTGATTAAAGTTAAAAATTTGATTGGTTGAT AATTTTTTACTAATCAAAGATACTAGTATCATTTTCTTACGGTTGTCAAACATACTAATATTATTAAGTTTGTTAAAAAT GTCTGTTTCGAGAGAGTGAATTACTACTAATTAGATAAAAATTGATCTCTTCATTGTTCATATTTAAAACTTCCTAACAA AAACCAAGAGTTTTTGGTTTTTTGAGGTATCTCTACCGTTAACAGCTGGGATTAATCTCTTGAGCCTTAGAAATCATGTT AAGAGTGTATGTTTCTTCCAATAAATGTTTATTCATATGCACTGTTTAGAAATCGAACTCTGAACTAATTGGTTAAGAAG ACTAACAAAAACAAAGACTTTCGAAACTAGTTTAATAAAAGAATAATCTCTAACTCTAATATATATATATATATATATAT ATATATATATATATGCGTAACTATTAATAAATATTGCACAGCTAATCAATGTATAAAACATGAATACTTCTAAGTAGTTT AACTATCACCGAGTAATGCTTCATCAATTATATTAATTTGTCAGGTGATATGTGGCCATGTGGGTGTCATCAACATGCAT CGTGGCTATGTTTATATATTTCAAAATTGATTATGACTTTTAATTTGGTATAATTAAGTTAGAATGGAAGAACATATCTT TGACAGCATGATTGTGTTTTTTGCATTTTAAGATAGAATTATTAATTCTGAATTGCAAATGTTCTTATTCTACCCTTAAA ATGACTTTTTCTCTACAGAAAAAATAAATAATTTCACTTTCACAAAACCTTTTTACTCATTGTAAATGTAATTTTAATAT GAAGTATTTTCTAACAAATAACTTCTAATGTAAGAAATTATTTTAGTGAAACATGTTTTGTCAAACTACCCTTTTTAGTT TTTCCTCTTGTAATAAAAAAAAAGTACCCTTCTTAGCCTTAAAATAAACAAGCACTACGCAAGCATATGTTGAGTCTACA AATTTTTTAAGTTTGCACCCAACGCGGGTGATTTTTCTATATGAGGGTCCCCATTTTAGAATTGATTATTTTAATTTAGT TCCTCTCTCGGTGTACCCACATTGGATAAGGAACTCGTTTTTTATTTATTTAAAATACAGCATGAAATGCATTAATAATA TTATATACAGTACTTTTTAATACCAGATTTAATTATTACTTTTGACTATAGTTGCATAAATTAAAATTTGAACCTTTCTT GTTTGAGATTTAACATTACGGGCCCATTTCAAATGAACTCTCTCATACTTTTCTTTCTTTCTTTTTTTTATTAATTCCTG TGAATGGTTTCATTTGTACTTTTGAACACTCCATATTATTTTCCTAACTGCTCTCCCCTTGTTTTCCTTTCTATGCATTG GTCTACGTTTCAAAGGCATATAACATCAACTCTACCAACGTAATATTATTTCATATGGGCCATATGCCCATTTGATTCGT CACTATAAAACTACGGACTGGCTTCAATTATTAAAATTGTCGTATTTTTTATTTTGAGTAAATTATTTTTTTTCTTATCA TTTCTTTTCATAGATGTACACTGCCATATTTATATTTGAGTCCCACTTTTTTCACCAAATATATAATAGTGGTTTGAAAA ATCACGTGAACAAAATAATTTTGGATGCATTTTTCTAATGTCATATTCTGTGGTACACGTTGTTTTGAATAATATTTGTG AACCATGTGCCAATGTAGTAGCAATCTGTCTTGACCAGCTGTTCACGTGGTTGTCCATTTGGACTTTGCATTGACTCTGT TTGCTTTAATTTCAAATGAAGAATCTATGGTTCATTGGTTGTCTTTCATCATGATTTTTGTTTGCTTGGAGTTTATTACC AATTAGTATATTTGATAGAAATAATAACTTTAAGCAGGTAGTGTTGATTATTGCCACTTCACTGCCAATTTGCTATATAT CTATTGGAAACTTGCTTTAAGTGCATTACCTTACTTGCATTTTTAGACAACAGGACCAACATGTCATAGTGTCCACAACT CAATATTTGATGGTTAATGTAAGTGGGAAAGGAATAAAGGAATTTGATTTCCTTTTAGAAATTTTATTCTTCTATGTATG TCATCCCCAATAATGGAAGTGTGACAGTTTCACACTGTCAGCTACCACCCTAAGATTAAGACCAATGTGAGAGATTTGTC CATTTAAAATTGATTAATGTTATGTTGAAGCAAATTGTACACCCACATTTAGTGTTAAAAAGAAAGAAAAGTGAGATAAA TGTGAGATATGATAGATGATGTGATGAAAAATGAGAGATAGGAACAAAAAAAAATGTTAAATTGAAATTGAAGAGAAAGG GGGTGTGAATATACTAAATTTCTTTGAAATTCAAGAACAAATTTTTACCCAAAACAGCCTTAGGAGCCAATAATGTATGA GCAAATTGATGGGGGGACCATCTTGCAAATTGGATGTGTAGATGTTTGTCTATGTCCTCCCCATTAGCAGTTGGAAGTAC TTTTCGCTAACTTTTATTTTTCTTCCTCTTTTGGATGTTTTCATAGCCACTTTGGATCAGATCACTCCCAAATTATTTGA TTCCATGCACACTTGGTGTCTTTACATTCTAGAGAAGTACTGTTTTTTCATTTCACAACCATTTAGGAGAAACTAGCTGC CATGCCTAATGTAACTTTCGTTTTTTCCATGCCATATTATCTATCTCCCTATGTGTTTGATGAATTTCCTCGTTGAAATA TGAACTTTGTTTACAAATGCTTAATGTTGACTCATATTTACTTATCAGAACTATGATCCAAAGCTAGAGAGTGTACTAAG AAACGCATCCATGAAGCATAAGACAGTGATAATCACAACTTTGAATGATGCCTGGGCTGAGCCAGGTTCCATATTTGATC TCTTTCTTGAGAGTTTTCGCATTGGTGGGAACAAAACAGAGAAGCTTTTAGATCACTTGGTGGTAGTAACATGGGACCAA AAGGCATATGCTCGTTGCATCTCTTTGCACAAACATTGTTATCAGCTTGAAACTAAAGGTGACAATTTCACCAGTGAGGC ATTTTTCATGACCCCAGACTACCTACACATGATGTGGAGAAGAATTGAATTTCTTGGTTCTGTCCTTCAAATGGGGTACA GCTTTGTGTTCACGGTATCTAACTTTCTCTTTTCTTAGAATCAATTCTGATACTCAGAAGTCACTCAGTCCCCAAAATTG ATTTTGAGTGTGAATTAATTGTAGAAAGATTTCCAAACATGCACTTACATTCAAAGTTAATAAACATACTTAATGTTGTG TTTTCTCCTTTTGCAGGATACTGATATAATGTGGCTTAGAGATCCATTTAAAAGCTTTTACAAGGATACAGATTTCCAAA TTGCTTGTGATTATTTCAATGGCAACCCTAATGACATACAGAACCAGCCAAATGGAGGGTTTAACTATGTAAAATCTAAT CGAAGAACTATTTGGTTCTACAAGTTCTGGTTTAACTCTAGGGAAGACTACCCAGGATTGCATGATCAAGATGTTCTCAA CAAGATCAAAACAGACCCTCTCATTTCTCAGAAGAAGTTGAAGATTAGATTTCTCAACACTCGCTATTTTGGAGGGTTTT GTCAGTCTAGCAAGGATTTTAAGAAGGTCTCAACTATGCATGCCAATTGCTGTGTGGGTTTAGAAAACAAAGTTAATGAT CTAAGAATTTTGCTTGAGGATTGGAGGAAGTATATGGCATTGTCTGAAGATCAGAGAAATAAATCACATCCTTCCTGGAG TGTACCACAAACTTGCAGGTAATGTAAATAACTTCTGTTACATATCAATTCATTAGGTGAAAAAATTCATTACATAATTC CAATTACTTACCATTTTGCATCACATACATCATCTAATTGAGGCTTCAATTTATGTTGCTATGATTTCTGTATATTTATG TTTTCTCTACATCATTGATATCATGCAGAACATCATTTGAACGTACAAGACAAAGGAGGCAGGGTAAGGGGAAGTTGTGA CAGAGGTTGCATATTACTGTGTGATGCTTGTATCAATAGGTATGGGAAATTATCTGCAATTATAGGCTACCTTATAAAAG CATTGGACATTAATTTTACATTTGATTTATTTGTTGTAAGTTGTAACTAGCTTGTTGTCTTTCAATTCACTCCCCAACAA AAGAAAAGAAGAAGCCTTGTCTAAAATGTGCTTTTGTTTTTACTTCAAAATGATCTGCTAATTTCCAATGTTAATTTTTG TCCAAGATGTATCATTTAAAGTGCAAACAAGTTAATATGAATTTCTTTGTGAATCATGTATAAAGATAACTTTTGCTTTC ATCTATACTTATTAATTTCAAACAGAACAGAGGAGTTCCTTATTACAAGAGGGAATCCTTTTGTTTACTTACAATGTTAT TGCACCATGTTCTTGGACTAGATGTTCCCTCCTTTCTCTTCTATTAAACAAGTGGATAATTATATATTTAATTACTTCTT GTAGATTATTTTTTTGCTTAATTACTTATACTCTATCCTGATTTTGTCATGTTTATCAATTGGTTTTGAAGGTTGGGGAA CAATTTGCTCAAGTTTAGGATGACAGCTAAAGATTTTATGTTGACAAGCCAATTCTTTTGGGTTGGAAAAAGATTATAGA AGTGATAAACAAATCGAAAATGCGGACAAAGAAAAAAATGTTCAAGCTCTCAGACTGTGATGTAAATTTTACAATTGTGA AATTCAATAGTTTTTTGCTCAAAATTTTATTTTACTCTTTTGTGATTTTTTTACCTTTTTTTTCAAATTATATTTTTGTC ATTTTTCATGTGTATTTATTTTAATACTCCTATTTAACATTTTTTAGTTAACAGTTTATGCGAATTTCTCTTAAACTGTA AAACTATATGTTCATAATTTGGAAAAAAAAAACTTTAAAAACGGCAATTCCCCTGTTAAGAATATTTTGGTTACATCCCC TGTTAAGAATATGACTGTAGGTTCTAAATATTAAAACCAGTGCCGTAATAAAAGTAAAATTCAAGAAATGAGCAATTTAG TAAAAATTCACAATGTTCCATCAAAGCAAGAGGGTGTGTCATTGGTCTTAATTCTTTATTTTTAAATACAGATTTTGTAT TTTCAAAAAAGAAAAAAGTAC
CDS sequence (LotjaGi2g1v0182500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGAAATCGCCGCCGCTGCTGCTGGTGAATACGCCGTTGTCGTCGTGGCTGATGGTGGCAAGGCATGGAATTCTGG TGGAGCCTCCGGCAGCCACCTTTTGGTGAGGAGGGTCATGCAAGTCGTGATGTTTGTTGTTGGTTTTGGTGTGTTGTGGA TGTTTCTGTACAACTCTGCTTCTCCTCTGGGATTCCCTGCCATCTCACACTACTACTCATCAAAGAACTATGATCCAAAG CTAGAGAGTGTACTAAGAAACGCATCCATGAAGCATAAGACAGTGATAATCACAACTTTGAATGATGCCTGGGCTGAGCC AGGTTCCATATTTGATCTCTTTCTTGAGAGTTTTCGCATTGGTGGGAACAAAACAGAGAAGCTTTTAGATCACTTGGTGG TAGTAACATGGGACCAAAAGGCATATGCTCGTTGCATCTCTTTGCACAAACATTGTTATCAGCTTGAAACTAAAGGTGAC AATTTCACCAGTGAGGCATTTTTCATGACCCCAGACTACCTACACATGATGTGGAGAAGAATTGAATTTCTTGGTTCTGT CCTTCAAATGGGGTACAGCTTTGTGTTCACGGATACTGATATAATGTGGCTTAGAGATCCATTTAAAAGCTTTTACAAGG ATACAGATTTCCAAATTGCTTGTGATTATTTCAATGGCAACCCTAATGACATACAGAACCAGCCAAATGGAGGGTTTAAC TATGTAAAATCTAATCGAAGAACTATTTGGTTCTACAAGTTCTGGTTTAACTCTAGGGAAGACTACCCAGGATTGCATGA TCAAGATGTTCTCAACAAGATCAAAACAGACCCTCTCATTTCTCAGAAGAAGTTGAAGATTAGATTTCTCAACACTCGCT ATTTTGGAGGGTTTTGTCAGTCTAGCAAGGATTTTAAGAAGGTCTCAACTATGCATGCCAATTGCTGTGTGGGTTTAGAA AACAAAGTTAATGATCTAAGAATTTTGCTTGAGGATTGGAGGAAGTATATGGCATTGTCTGAAGATCAGAGAAATAAATC ACATCCTTCCTGGAGTGTACCACAAACTTGCAGAACATCATTTGAACGTACAAGACAAAGGAGGCAGGGTAAGGGGAAGT TGTGA
Protein sequence (LotjaGi2g1v0182500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKEIAAAAAGEYAVVVVADGGKAWNSGGASGSHLLVRRVMQVVMFVVGFGVLWMFLYNSASPLGFPAISHYYSSKNYDPK LESVLRNASMKHKTVIITTLNDAWAEPGSIFDLFLESFRIGGNKTEKLLDHLVVVTWDQKAYARCISLHKHCYQLETKGD NFTSEAFFMTPDYLHMMWRRIEFLGSVLQMGYSFVFTDTDIMWLRDPFKSFYKDTDFQIACDYFNGNPNDIQNQPNGGFN YVKSNRRTIWFYKFWFNSREDYPGLHDQDVLNKIKTDPLISQKKLKIRFLNTRYFGGFCQSSKDFKKVSTMHANCCVGLE NKVNDLRILLEDWRKYMALSEDQRNKSHPSWSVPQTCRTSFERTRQRRQGKGKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 38 | 38 | - | – | |
| PANTHER | 27 | 365 | 339 | 4.9E-195 | – | |
| PANTHER | 27 | 365 | 339 | 4.9E-195 | – | |
| TMHMM | 34 | 56 | 23 | - | – | |
| Phobius | 39 | 57 | 19 | - | – | |
| Phobius | 58 | 374 | 317 | - | – | |
| Pfam | 128 | 326 | 199 | 1.5E-59 | ||
| MobiDBLite | 345 | 360 | 16 | - | – | |
| MobiDBLite | 345 | 374 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0182500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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