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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0188700 |
| Transcript ID | LotjaGi2g1v0188700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I3S0S8|I3S0S8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0188700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:61840359..61844487) extracted from Lotus japonicus Gifu genome v1.2.
ATCCCAACATTGAGATCTCTGTGTGCAAGTGTAGTGCACCAGAGTGTGCCAGCTAGAGAGCACCAGAGGGTGCCTCTGGG CACCTGAGTGTGGTGAGGATGTGAGAGCTCTGTGTGCAAGTTCAGTGCACCAGAGTGTGCCAGCGAGAGAGCACCAGAGG GTGCCTCTGGGCACCAGAGTGTGGTGAGGTTGGAAGAGCAATTGTATGAGAGCTCTGAGTGTGTGTGAGGCCAGAGATAG AGAGTTGAGTGATTGTAATGTTTGTATTAATGAGAATACAATGTTCCTCCTCCGTGGACGTAGGCATTCAGGCCGAACCA CGTTAAATCTTTGCCTCCTTTATGTTCCTCGTCTCTCACCGGTCCCAACACTTTCAACTCCCTAACCCTCACCCCTCTGC CCTATCACCCCGTCCACCATCAGATCCACCCTCACACTCCCTAACCCTCACCCTCTCTCCCTTATTACTGTTGTCGCTAA CCAACCTACCTCACAATGACACAATGCCACCTCTTCCTCCCTTTTCCCTCATCCACCAGTTCATGCTCCACCACCCTCAC CTCTACCGGTCCACCGTAGTTTTCTATGCTACTCTCGCCCCTTAATCTAATCTGTCACCACCCTCACAACTTTCCTACCG CACCATCATTGTTTTCATTGCTATCTTACCGCTGCTGCTGCCAAGACCTCCGCCGAAATCGTCACCTCTGGTTCCATCTC GCCACTGCCATATGTAGGCAAGGTTCTTTTTTTTTTTTCTTTTGCTAGAAGACACTTTTATTAGATTATGTTGTCTACCT ATGAATTGGTTTGACAATATGGAATGAAGGAAGAACTCGTATTCACATTTGATGTTCACGATGATTATTTTCAGAAATGT ATTAGAATTATTTTCACCACAATAGCATCAAAGTTATGTTAGAGATTCATAGTTATTTAATTTCAATTGTTCTTTGTTTT TGAATTGTAGATAGAGTTGCATAATTATGATTAGTGAAATATATGTACAAGCCTATTCTTTGTTACAGAGTAACAAGCAT ATTCTTTGTATGCATGGACAAATAATAGAGAACCTTATTGATCTCTGCTCCATGAAAGCATTAAACTCTTTTGCCAAATT CTTCGAGACACCCATGCCAAATTCTTTTTATTGATATTATTCAATTCAGCAATCCCTTTTTTATAAGGATTGATATGCAA GAAAAGAAAATAGGAAACTACAATCCTATCTAATTAAAAAACAAATATTAATTTTAACTAATAAGATAAGATAGAATAAA ATTAGGGTTTGTGATATCCTTGTCTCTCACTCGAAGGAAAATCAATCAGAATCAGAAGTAGAACATCAACAATGGAGCTC CAAAAATCAAAATCAATGGATGTTCCTCTGAGCTTCACACAACATTTATTCTCAAAAGAAGATTATCAAGAGAAGAACCT CATCTATTCACCCTTGTCTCTCTACGCTGCTCTTAGTGTCATCGCCGCCGGTTCAGAAGGCCGCACATTCGACGAGCTTC TTTCGTTCCTCCGATTTGACTCCATCGACAATCTCAATACCTTCTTCTCTCAGGCCATCTCCCCTGTGTTCTTCGACAAT GATGCTGCTTCTCCTTTACAGCATTACAATGGAATATTTATTGATACAACGGTTTCCCTTTCCTATCCTTTTAGAAGACT TCTGTCCACTCATTACAATGCCAATCTAACTTCACTTGATTTTAATCTCCGGGTACGTACTATCTCAAATTAAATTGTTT ATGAACAAAATATTAATTTTGATTTTGATTTTGATTTTGATTTTGATGTGCTTGGTTGGTTTTAAAGGGTGGTAAAGTGC TTCATGAAATGAATTCATTGATTGAAGAAGATACTAATGGCCATATTACACAGCTTCTTCCTCCCGGAACAGTAACCAAC TTAACCAGGCTTATCTTTGCAAATGCACTGTGCTTCCAGGGTATGTGGAAACACAAGTTTGATGGTCTAACATATGTATC ACCATTTAACCTGCTTAATGGCACCTCTGTCAAGGTTCCCTTCATGACTACCTGTAAGAACACACAGTATGTTAGAGCTT TTGATGGTTTCAAAATTCTCCGTCTTCCTTATAAACAAGGAAGAGATAGACAACGCCGCTTCTCCATGTGCATTTTCCTT CCAGATGCACAAGATGGACTTTCAGCTTTAATTCAAAAGTTGTCTTCAGAACCTTGTTTCTTGAAAGGCAAGCTTCCTCG CCGAAAAGTACGAGTACATCCCTTCTGGATTCCAAAATTCAATATTTCTTTTACATTTGAAGCTTCTAATGTGCTCAAGG AGGTTGGAGTGGTTTCACCTTTCTCTCCAATGGACGCACATTTAACAAAAATGGTGAATGTGAATTCTCCTTTGGATAAT TTATGCGTGCAAAGCATATTTCACAAAGCTTTCATTGAAGTGAATGAAAAAGGCACTAAAGCAACCGCAGCCACTTGGTC TGCGCTGGCACGACAATGTGCTCGAGATCATCTTCCAGCTATAGACTTTATAGCTGACCACCCATTCCTCTTCTTGATCA GAGAAGATTTCACCGGAACAATCCTCTTCGTTGGGCAGGTGCTCAATCCTCTTGATGGATTACCGGTCAAGGTTAGCAAT CTCTATTTGCATTTTGTGATTTGGACTGTTGGTGATTTTCTTTATTATGCTGTAATGGAATAGGTTAAAACGGTGGACAG ATTAATTATAATAGTGTATGTACTGTTTTGCTGTTTTTTTTTATATTGGGGTAGTGTTACTGTTGAGCCAAATAGAAGTT TCTCTATTGTCAATAAATTGGGAAAAAAGTATAGACTTTGTAGCTGACCACTCTTTCCTCTTCTTGATCAGAGAAGGCAC GCGGTGGGCAGGTGCTCAGCAGCAGCTATGCCGGTCAAGGTTAGCAATCTCAATACATGATTGCATTTCGTGATTTGAAC TGTTCATGATTTTCTTTATTGTGCTGTAATTAATGGAGTAGTTTAAAACGGTGGAATGCCTAATTATAGTAGTGTATGTT GAATTTTCGTTGTTGTGTAGTGTTTCAGTTTGTTCTTTTAAAGCTATTTGATTGAACCAATCTTGTATAGCAGTGGGCTC TGTTAGTGTTTTGCTCATTACCTCATTTTGTTTTATAGGATTGGCGTGTGACGCCTCTCTCCGAGGATGAAGATTCGATG TTTTTAGGCCTTTCGAGGGGGTGCCTGCCATCTCCAAGGTTACCTTCATCCGCGCTCTTCCCTGAAATTTCCCTTGTTGA TTGAAGGTTTGATGTTTCGTTTCCTTTTCCTCTTGGATTTTTCTGGGTTGGTGTTTGTTCTTTCTAGGCTGGGTTGTCAT TGGTGTTATTGGCTTTTTGATGCCTTTTGAGGAGGCTTGTATATCCTGTATATTTCCCTCAATTATAATGATATTTTGCT TTCGAAAAAAAATATAGTTACTTTACAAACATCAGTGCTCTAAATTATGCAAAAGAATATCAGGTTGTGATATAGAATGG TGGATTCTAAACTTCTGGGTATGGGGAAATGGAAATGTTTTCTTCCTCATGAAACAAGGAAATCCTATTGTAGAAGGAAG AAAACCATTAAGTTTCCAAAAGCTAAATTGCTATTGCATTCTATTTCTGACTGCTATGTCCATCTAACAGTTGTGTAAGG CTGGTTTTAATTGAATTAGAAATGGATTTTATCTTGAAGTCACTGTTGGTAGATGAAAGCAATAATGTGGAAATGGTTTT TACTTCTTGAGAGGGGGCACGGGATGCTATATATTATCACACCTTATAATGCATTTCTACATTCATTATCTCATTTTAAT TTCTTCCGTATGTTGCTCTCAGTTTTGATTATGTATAACTTAAATAGAAGAAACACAGCTATTGATTTCAGAGCATGAAT TGCAAGATGAAATTGGAAGTATTGAATCAAGTGACATTGGACCCGAAGCTGCAATCCCAAAAGCAGGACAAAGAAATCCT AAAGTTCCAAATAGGATATTCATTAGAGTAGGGTTATTGTGCTCTTTGTTGACATAATCATGTAGCAAAAGATATACATT TAACAATAATTTTGACTGCAATAAAATTTATCAGAAGTTTTGATTCCAA
CDS sequence (LotjaGi2g1v0188700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCTCCAAAAATCAAAATCAATGGATGTTCCTCTGAGCTTCACACAACATTTATTCTCAAAAGAAGATTATCAAGA GAAGAACCTCATCTATTCACCCTTGTCTCTCTACGCTGCTCTTAGTGTCATCGCCGCCGGTTCAGAAGGCCGCACATTCG ACGAGCTTCTTTCGTTCCTCCGATTTGACTCCATCGACAATCTCAATACCTTCTTCTCTCAGGCCATCTCCCCTGTGTTC TTCGACAATGATGCTGCTTCTCCTTTACAGCATTACAATGGAATATTTATTGATACAACGGTTTCCCTTTCCTATCCTTT TAGAAGACTTCTGTCCACTCATTACAATGCCAATCTAACTTCACTTGATTTTAATCTCCGGGGTGGTAAAGTGCTTCATG AAATGAATTCATTGATTGAAGAAGATACTAATGGCCATATTACACAGCTTCTTCCTCCCGGAACAGTAACCAACTTAACC AGGCTTATCTTTGCAAATGCACTGTGCTTCCAGGGTATGTGGAAACACAAGTTTGATGGTCTAACATATGTATCACCATT TAACCTGCTTAATGGCACCTCTGTCAAGGTTCCCTTCATGACTACCTGTAAGAACACACAGTATGTTAGAGCTTTTGATG GTTTCAAAATTCTCCGTCTTCCTTATAAACAAGGAAGAGATAGACAACGCCGCTTCTCCATGTGCATTTTCCTTCCAGAT GCACAAGATGGACTTTCAGCTTTAATTCAAAAGTTGTCTTCAGAACCTTGTTTCTTGAAAGGCAAGCTTCCTCGCCGAAA AGTACGAGTACATCCCTTCTGGATTCCAAAATTCAATATTTCTTTTACATTTGAAGCTTCTAATGTGCTCAAGGAGGTTG GAGTGGTTTCACCTTTCTCTCCAATGGACGCACATTTAACAAAAATGGTGAATGTGAATTCTCCTTTGGATAATTTATGC GTGCAAAGCATATTTCACAAAGCTTTCATTGAAGTGAATGAAAAAGGCACTAAAGCAACCGCAGCCACTTGGTCTGCGCT GGCACGACAATGTGCTCGAGATCATCTTCCAGCTATAGACTTTATAGCTGACCACCCATTCCTCTTCTTGATCAGAGAAG ATTTCACCGGAACAATCCTCTTCGTTGGGCAGGTGCTCAATCCTCTTGATGGATTACCGGTCAAGAGAAGGCACGCGGTG GGCAGGTGCTCAGCAGCAGCTATGCCGGTCAAGGATTGGCGTGTGACGCCTCTCTCCGAGGATGAAGATTCGATGTTTTT AGGCCTTTCGAGGGGGTGCCTGCCATCTCCAAGGTTACCTTCATCCGCGCTCTTCCCTGAAATTTCCCTTGTTGATTGA
Protein sequence (LotjaGi2g1v0188700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELQKSKSMDVPLSFTQHLFSKEDYQEKNLIYSPLSLYAALSVIAAGSEGRTFDELLSFLRFDSIDNLNTFFSQAISPVF FDNDAASPLQHYNGIFIDTTVSLSYPFRRLLSTHYNANLTSLDFNLRGGKVLHEMNSLIEEDTNGHITQLLPPGTVTNLT RLIFANALCFQGMWKHKFDGLTYVSPFNLLNGTSVKVPFMTTCKNTQYVRAFDGFKILRLPYKQGRDRQRRFSMCIFLPD AQDGLSALIQKLSSEPCFLKGKLPRRKVRVHPFWIPKFNISFTFEASNVLKEVGVVSPFSPMDAHLTKMVNVNSPLDNLC VQSIFHKAFIEVNEKGTKATAATWSALARQCARDHLPAIDFIADHPFLFLIREDFTGTILFVGQVLNPLDGLPVKRRHAV GRCSAAAMPVKDWRVTPLSEDEDSMFLGLSRGCLPSPRLPSSALFPEISLVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 389 | 381 | 1.8E-112 | – | |
| PANTHER | 9 | 389 | 381 | 1.8E-112 | ||
| SMART | 13 | 388 | 376 | 1.0E-69 | ||
| SUPERFAMILY | 13 | 388 | 376 | 3.01E-95 | ||
| Pfam | 15 | 388 | 374 | 7.6E-88 | ||
| Gene3D | 27 | 334 | 308 | 1.5E-102 | ||
| Gene3D | 174 | 383 | 210 | 1.5E-102 | ||
| ProSitePatterns | 361 | 371 | 11 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi2g1v0188700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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