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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0189100 |
| Transcript ID | LotjaGi2g1v0189100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I3S0S8|I3S0S8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0189100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:61930999..61935026) extracted from Lotus japonicus Gifu genome v1.2.
ACCCAACACTACACGCTGAAGCATCTAAATAAAATTAGGGCTTGTGATATCCTTCGCGGAAAGTCGATCTGGATCGAAAA CAATGGAGATCCAAAAATCAAAATCAACGAGGTGCCAATCAGACGTTGCTCTGAGCTTCACAAAACATTTATTCTCAAAA GAAGATTATCAAGAGAAGAATCTCATCTTTTCACCCTTGTCTCTCTACGCTGCTCTTAGCGTTATGGCCGCCGGTTCAGA AGGCCGCACACTCGACGAGCTTCTTTCCTTCCTCCGATTTGACTCTATCGATCATCTCAACACCTACTTCTCTCAAGGGA TTTCCCCTGTGTTCTCCGACGAGGATCCTGCTTCTTCTCCTTCACAGCATCATCTGTCTTTTACCAATGGAATGTTTATT GATACAACGGTTTCCCTTTCCTATCCTTTTAGAAGACTTCTGTCCACTCATTACAATGCCAGTCTAGCTTCACTTGATTT TAATCTCCGGGTACGTACTATCTCAAATTAAATTGTTTATGAACAAAATATTAATTTTGATTTTGATTTTGATTTTGATT TTGATGTGCTTGGTTGGTTTTAAAGGGTGATAGTGTGCTCCATGATGTGAATTCATTGATTGAACAAGAGAGTAATGGCC TTATTACACAGCTTCTTCCACCGGGGACAGTAACCAACTTAACCAAGCTTATCTTTGCAAATGCACTGCGCTTCCAGGGT ATGTGGAAACACACGCTTGATGGTCTAACACATGTATCATCATTTAACCTCCTTAGTGGCACCTCTGTCAAGGTTCCCTA CATGACTACCTTTAAGAAAACACAGTATGTTAGAGCTTTTGATGGTTTCAAAATTCTCCGTCTTCCTTATAAACAAGGAA GAGATAGACAACGCCGCTTCTCCATGTGCATTTTCCTTCCAGATGCACAAGATGGACTTTCAGCTTTAATTCAAAAGTTG TCTTCAGAACCTGGTTTCTTGAAAGGCAAGCTTCCTCACCGAAAAGTGCGAGTACGTCCATTCCGGGTTCCAAAATTCAA TATTTCTTTTACATTTGAAGCTTCTAACGTGCTCAAGGAGGTTGGAGTGGTTTCCCCTTTCTCTCCAATGGATGCGCATT TTACAAAAATGGTGAATGTGAATTCTCCTTCGGATAATTTATTCGTGCAAAGCATATTTCACAAAGCTTTCATTGAAGTG AATGAAAAAGGCACTAAAGCAACCGCAGCCACTTGGTCTGCGCTGGCACGACAATGTGCTCGAGATCATCATCCATCTAT AGACTTTATAGCTGACCACCCTTTCCTCTTCTTGATCAGAGAAGATTTCACCGGAACAATCCTCTTCGTTGGGCAGGTGC TCAATCCTCTTGATGGATTACCTGTCAAGGTTAGCAATCTCTAATTGCATTTTGTGATTTGGACTGTTGGTGATTTTCTT TATTATGCTGTAATAGAATTGTTTCAAACGGTGGACGGACTAATTATAATAGTGTATGTACTATTTTGCTTCTTTTTTTA ATATCGTGGCAGTGTTACTGTTGGCCCAAATAGAAGTTTCTCTATTGTCATTAAATTGGGAAAAAAGTATAGACTTTGTA GCTGACCACTCTTTCCTCTTCTTGATCAGAGAACTCGCCGTTTGTGCATCAGCCCAGTAGCAGCTAGGCCGGTCAAGGTT AGCAATCTCAATATATGATTGCATTTCGTGATTTGGACTGTTAATGATTTTCTTTATTGTGCTGTAATTAATGTAATAGT TTAAAACGGTGGAATGACTAATTATAGTAGTCTATGTTGATTTTCGTTGTTCTGTAGTGTTTTAGTTTGTTCTTTTAAAG CTATTTGATTGAACCAATCTTGTATAGCAGTGACTTCTATTAGTGTTTTGCTCATTACCTCATTTTGTTTTATAGGATCG GCGTGTGACGCCTCTCTCCAAGGATGAAAATTCGATGTTTTTAGGCCTTTCTAGGGAGTACCAACCATCTCCAAGGTTAC CTTCATCCGCGCTCTTCCCTGAAATTTCCCTTGTTGATTGCAGGTTTGATGTTTGTGGCTGTGAAGGTTGGAAGGCCTGA AGCCACCCATGGAAGGTTTTACTGCATTTTGTATATCCTTACTTATTTGTTACGTTACAGAACCAATAATATTTGTTTTT GAAATGCCTGGAGGTCAAAATCAATATTAGTTGGTATATTCCGAGTACTTTTTTCATAACCTGATCCTCCATTGCCTGTA CAGAGAGGGTGAATTCCGGTTCATTTTTGAGTTGACTCGTGATTCATCTATTGCTTGGAAAGAAACAAATTTAATACCAG CCCAAGGCTCCATGGGATACTCCAAATATAGTACATGCTACACTGGAGTGGTTCAAACAATGAGATTACAAATCATAATC GGGAAGCAATTTAGTAGGTGTTTGAAGATTTCTCCACAATTGAAAATGAGAAATCATGTGAGCAGTTTTTGGGTGACATA AAAGAAAATAGAAACTAATCCACACATGCTATTTACATATTGGTAAAGGTTGCTCCACCCGCAAGGTATTCCCTGGCTGG CATTACGTCAAGCAGGGGAATGAATCCACCTTAAAATTTTCAGGTGTGGTAGAAAAAGGTGACCAAACCCAAAATTTTGC TGAGTTAAATTAATTAAGCATACTTTAATACCAACCAAGCTACATCCGACCAGGCTTTTAGGCCCAGAAAATTGACTCTT GTTCTCAGATGAAGTAGCAATTTCGTGGCTATATAGTGGCGCACAATTACTAAATAATAGTCATTTGAATAATTGGTTAC AAACTAGATTATTGCTTTCATAGTCAAATAACCTTCACCATATGCAAGTTCTAGGTATAACTGAAAACATGAGATAAAAA ATCCCCTCAAACATATGAGAAGCAGATAGCTCTCAAAAAACAGTGACCTGAGTGAAATCAAATGAGAGCCCTTCAAGAAA TTCACAATAAGAGAATGAGACAAGACAAAGATTTAGTATCTATGATGGCTTTGTTATTATAATCCCAACAAAATAAAGCT TTTGGTGTCATTCGGAGTTTTAATGGGAACAGTTTATTTTAAAAATCATAGTATTGGATAAAGTAAGATACTAAACAACA TTTTACATGCTACAATAAAACAGAGAGGGGGTTGAGATGTGTTACCATCATCACTGTAGCTGTATGGAGGAGGGAAGAAC TGCTCAACTGCATATAGGAGAATATTGCTCCAACAAGCCCTGCAGGAAACATAGAGGGTAGTGATATCAGTTTCGTTTTT TTTCATAAAATGAGTTGTGATATCTAATACTTGGCTCTGGCAAAGATCAGTTACTAGAATTTGAATCAACTTATTTTTCA TTACAGTCATTTATTATGTTCAGAAACTACATATAAATATTTCTCTCTTAGAGTGATTTGAACTTTGGAATCAATTGTAG AATGATCTCCAAGTTGGATGAAAACAAACCTAGAAGGTCACCAGCAAACACATCTTGCAAATGATGCCAATAGTCATCAA CTCTACTGATTCCAACTAGACAAGCAACAAGTAGAGAAAGAAACATAATGCATACTTTTGCCACGTGCCCTCGGCCTCTG CGACCAAAGCGTCAATCTTCCCACATAGCTAGGTACAAAGAGAGGAAACCTAGACCTGAAAACGACACTGCAGAACAAAA TTGATTAGATAAAGGTGGATACAGATACAATTTTCTGAACAAAATATGATATTTCGTCTCCTTATAATATCTAATGTTAG TTTTTTCTTAATTTTTTCTTGTCTCTGCATTTGCTTTTTCCTCTGCACTCTAATATGTGTTAGCCTTTCACCTCTCAATC AATACGTACGCATAACTGTTGTTTAGGACGTTCATCTACTTAATCATAGTTACAGATGTTATCTACTTCACTTACTTATG TTTGTACTCAACTAGATTAAGACCCGCGCGATGCGCGATTGGTATAATGAATTATTTTTTTTGTTAGAGTCAAAAGTGAT ACATGCAGTCTTGTAAATATAGTTACAC
CDS sequence (LotjaGi2g1v0189100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATCCAAAAATCAAAATCAACGAGGTGCCAATCAGACGTTGCTCTGAGCTTCACAAAACATTTATTCTCAAAAGA AGATTATCAAGAGAAGAATCTCATCTTTTCACCCTTGTCTCTCTACGCTGCTCTTAGCGTTATGGCCGCCGGTTCAGAAG GCCGCACACTCGACGAGCTTCTTTCCTTCCTCCGATTTGACTCTATCGATCATCTCAACACCTACTTCTCTCAAGGGATT TCCCCTGTGTTCTCCGACGAGGATCCTGCTTCTTCTCCTTCACAGCATCATCTGTCTTTTACCAATGGAATGTTTATTGA TACAACGGTTTCCCTTTCCTATCCTTTTAGAAGACTTCTGTCCACTCATTACAATGCCAGTCTAGCTTCACTTGATTTTA ATCTCCGGGGTGATAGTGTGCTCCATGATGTGAATTCATTGATTGAACAAGAGAGTAATGGCCTTATTACACAGCTTCTT CCACCGGGGACAGTAACCAACTTAACCAAGCTTATCTTTGCAAATGCACTGCGCTTCCAGGGTATGTGGAAACACACGCT TGATGGTCTAACACATGTATCATCATTTAACCTCCTTAGTGGCACCTCTGTCAAGGTTCCCTACATGACTACCTTTAAGA AAACACAGTATGTTAGAGCTTTTGATGGTTTCAAAATTCTCCGTCTTCCTTATAAACAAGGAAGAGATAGACAACGCCGC TTCTCCATGTGCATTTTCCTTCCAGATGCACAAGATGGACTTTCAGCTTTAATTCAAAAGTTGTCTTCAGAACCTGGTTT CTTGAAAGGCAAGCTTCCTCACCGAAAAGTGCGAGTACGTCCATTCCGGGTTCCAAAATTCAATATTTCTTTTACATTTG AAGCTTCTAACGTGCTCAAGGAGGTTGGAGTGGTTTCCCCTTTCTCTCCAATGGATGCGCATTTTACAAAAATGGTGAAT GTGAATTCTCCTTCGGATAATTTATTCGTGCAAAGCATATTTCACAAAGCTTTCATTGAAGTGAATGAAAAAGGCACTAA AGCAACCGCAGCCACTTGGTCTGCGCTGGCACGACAATGTGCTCGAGATCATCATCCATCTATAGACTTTATAGCTGACC ACCCTTTCCTCTTCTTGATCAGAGAAGATTTCACCGGAACAATCCTCTTCGTTGGGCAGGTGCTCAATCCTCTTGATGGA TTACCTGTCAAGAGAACTCGCCGTTTGTGCATCAGCCCAGTAGCAGCTAGGCCGGTCAAGGATCGGCGTGTGACGCCTCT CTCCAAGGATGAAAATTCGATGTTTTTAGGCCTTTCTAGGGAGTACCAACCATCTCCAAGGTTACCTTCATCCGCGCTCT TCCCTGAAATTTCCCTTGTTGATTGCAGGTTTGATGTTTGTGGCTGTGAAGGTTGGAAGGCCTGA
Protein sequence (LotjaGi2g1v0189100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEIQKSKSTRCQSDVALSFTKHLFSKEDYQEKNLIFSPLSLYAALSVMAAGSEGRTLDELLSFLRFDSIDHLNTYFSQGI SPVFSDEDPASSPSQHHLSFTNGMFIDTTVSLSYPFRRLLSTHYNASLASLDFNLRGDSVLHDVNSLIEQESNGLITQLL PPGTVTNLTKLIFANALRFQGMWKHTLDGLTHVSSFNLLSGTSVKVPYMTTFKKTQYVRAFDGFKILRLPYKQGRDRQRR FSMCIFLPDAQDGLSALIQKLSSEPGFLKGKLPHRKVRVRPFRVPKFNISFTFEASNVLKEVGVVSPFSPMDAHFTKMVN VNSPSDNLFVQSIFHKAFIEVNEKGTKATAATWSALARQCARDHHPSIDFIADHPFLFLIREDFTGTILFVGQVLNPLDG LPVKRTRRLCISPVAARPVKDRRVTPLSKDENSMFLGLSREYQPSPRLPSSALFPEISLVDCRFDVCGCEGWKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 398 | 391 | 4.2E-115 | – | |
| PANTHER | 8 | 398 | 391 | 4.2E-115 | ||
| SUPERFAMILY | 10 | 397 | 388 | 2.09E-93 | ||
| Pfam | 13 | 397 | 385 | 1.2E-86 | ||
| SMART | 17 | 397 | 381 | 8.4E-68 | ||
| Gene3D | 31 | 343 | 313 | 1.3E-100 | ||
| Gene3D | 183 | 392 | 210 | 1.3E-100 | ||
| ProSitePatterns | 370 | 380 | 11 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi2g1v0189100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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