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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0191700 |
| Transcript ID | LotjaGi2g1v0191700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | B-cell receptor-associated-like protein; TAIR: AT1G48440.1 B-cell receptor-associated 31-like protein; Swiss-Prot: sp|O14290|YF14_SCHPO Uncharacterized protein C9E9.04; TrEMBL-Plants: tr|I3SNQ4|I3SNQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0191700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:62311044..62315862) extracted from Lotus japonicus Gifu genome v1.2.
CCGATATCCATTTATATCCCGATTAATACCCTACTTACCTCATAAGAAAAGGATCAAGAGACCTTGAAAGGAAAACAAAG AAAAAAGGACCGAACGAACGATACTCACAAAGGAAGAGACTCGAGAGAACTCAGAAACCATCACAATCACAATGGCGTTG CAATGGTTGATTCTCACCTACATAGTCGCCGCTGAAGCTGCCGTCGCGATTCTGCTAACCCTTCCCTCACCCAAGCTCCT CAGAAACCGCTTCGTCTCTCTGGTTTCGCTCATTCTGCAACCTGCGCTTTTCATCGTTCCCTTTGCTGGGTTCCAGCTTC TAGGTATGAAAAACACACATACACTCTCTCTTCTCATTGTTTCCTCTAATGGGTATCTTCAATTTCACCTTGAATCATCT GGGTATGCCCCAAAATCTTTCCTTTTTTGATGCTTCGTTGGTGGGTAGGTGGTTGAAAATTGTTGCAATTAGTCTTTATT TTGGGGTTTATGGATGATCACCCATCTGGGTATCTGGTTTGTTGTGAAAATTTGGATCTTTTCACTTTTCTCTTTGGGAT GGACTAGTTAGATTCAGAAATTGAGAAAGGCTTAGAAGGGGATTTATTTTTTTCAATTTTTTTTGTTGATTGTGTTCTCT TTGGGATGGATCTACCGTTAGTGATCCTGAATTTGGATTTGTGATTGTTTGCAGATATATACTGGAAGAATGAGCATCGG TTGATGTGTACCGGTGAGGTTTGTACTGCTGCGGAGAGAGATCGATATGAGAAATCTGTAAGTATTTGATTTGATATGGA TGTTAAAGTAGCTTAATTGGAAAATTCGTAGTTTGCAGTGTAAATTGAGGTGGAGGTAACTGAATGTGCATAATTGAGGT CACTGAATGAACCTCTTTTTATTGATTTGGAGAATGTCAGTTAAGAAGTTAGAACAATTTCATTAATATTTGATGAAAAT AAAATGTTTAAAAGCAGTTGTTGATAAAGGCCTGGGGAGCATGGCTTATTCTATTTGTGAGTTGCTAATTTGATACACCA AGGATTGTAGTATAAAGGATTTATTGGTCTGTCAAGCAGTTCATAATTGGTTCAAAGAACTTCTACGATTAGGAATGTTG CAAAAGTAACAACAGGAAGCCCCAAAATTAATTTTGGGGATAGCAGAAACCTTTTATATTCATTCTGCAGTAATTAATTT TAAGCTTTACTTCATCAGTGTGCCGTGTTGCTTCTGTATGTATTGTTAACTTCTCTCTTCAGTCCTCATCTCATTCTAAT TTCTTCTATTTTTTATTTTAAATTTGTAATCCTCTTGGATTCTGGTATACTACTAAAAGTTGAAATTACCATTGCTTAAG AGCCAAAGGTCCAGTTTTTTCTTTTCAACATTCTTATTTTGCTCTTCTTAAGGTTGTCTTGTTTATTTGAAATTGTAGAA TAAATAAAATTTGTTTGGTGTGTCGATAAAGTTACTCTTAGCTCCCCAGATTATCCTTTGATAACATAAAAATCTTCACA AATATGAGGTGGAGGAGGAGAGAGATAGGAAGAAAAGAGAGAGAAAATAAAGATGTGATAGATGATTTGATTGATAGAGA AGAGAGAAATAGATAAAAGATAAAGGTGGAAAAGAGGTGAAAGGTGTGGATGAATCATAACTCCAGTAGTAGCATATATT GCATGTAGATGTTGTAACTAGTAACTGTCTTACTCTGACTCAGGACTAGGTCTGAAAGTGGTTTTTTGGTCTAAGCATAC AATGATTGAAATTAGTTTGTGGTTTTTCCTCTGATTTTGACTCTTTTTTTTTATATGTTCCCAATGATTCAGTTAATATA CATTGATAGAGACATGATCACTTATATTCTGATAAAGCTTCATTTACACTCATCAAAACATTATGCCTATTTCATTGATA CTTTACATATGGTGATATTGTTTTCTTGTTGATTATTTTAGCTTTTAGGGGTGTTCTTCCTTTGCTCTCCTGAAGTATTT CCATGAATAAATGTTTTAGTTATCCCCAGTTCCCCACTTTTTATGGCAGATGAGAGGGGAGGAGGGCGAAATGAATAAGG GTATTGAGAAAATATGAAATAGACTGAAGTCTGAATTGAAAAATATTCAAAAAAATTATTGTTATAAATCATAAATCCTC TTTTTGTATATGTTGAAAATGTTGCTTTAGGTGTTGCTCAGTAAACATATGAGCTGAGCTTTTCCAAGTATTTAGTTCGT TTCAGGCAGAGTCTGGCTTGGCTGTTCATGTGCCCATGTTTATGGACAAGTATCAGCATAATTGGATTTTGTCATTATAC GACCTTTTAAAGTAATTATGAAAAGTTGTCTAAATGAGCTTATCTAATGAAAAATAAATTAATACATGTGAACATATTAA ACACACAATGGAGTGATGGACTTTTAGTGCATCAGTTTTGTTGAGATGAACTATTCATGAAATTAAATTGAATTAGTGTT AGTTTTTTTAGGTCCAGTTCCAAATTCCAACCTAATGGTACAATCACCCATTACATCAATCTTTTCTTTCTGGTAAAATG ATTCTTTAAAGGATCATTTCAAGCGCTGTGTTAAAACTAGACCTGACTAGTGGATTAAAGTGGTCAAACAGTAAACCACT TATGTCTTGGGTTAGATATTATCTGGTTCAACTACAAATTTGATTAGTTGAATCAATGGAATCATGACATGAAGGTCTTC ATCTCCAGTTTAGCTATTAAAACATCGATTTTAAGGATCCCACCCATAGTTATCGAACTTGGACCAAGTACCAACCATTG GCTTAGTTGGAGGATTGTGTTACTGGTTCAACAGGAAGAAGCCATATAATTTTTCTTTTGATGGTAATGTGTTTCCAATA TTAAGACTTAAGAGAAGAAGCTTATGCATAACAGTAAATACACCAAATTAAATGAGGTTAGACTTGCTTGTCAATATGTC AGCAGCATTAGCTGCTGTCCCCAAAACACTACTTGGTGTTGACTTTAGAAGTGAATTTCTTGAGAAGTACCATCTTATTT TTTTCATATTCAACACTCTTTTAAGGTAGTGAAATTGTGTATTTTGAATGTGAAATGAGAAGAATATAGTTTTGTTTTTT GTTTGATATCAAAACATACTTTATCTTAACAATATATTTTTCTATATTGGACTGAGGTATGTTTTCTATATTGATCTCCT GCATTTGTGTGAGTGAGGTGCTACCACAGAAAGTTCAAGTCCCACTCCATTTAGTGAAGTGTGAGAAATATGTATGAGGA TAGAGCACATACACAAACAAGCTCACACACAATATATAAACAAGACTGCACCCTTGAAAGCACAAACCTTGTTGTTAGCA AAAACTGATTTCTTTTTGTTGCCATCTTTGATTTCAACAAGTGTGCCAGTTTCATTCTGTTCCCATTTCTGGTATAATCG GTGGCTTGAACTGATCCATGTGATTTGTTTGCTGGTTGAACTGGCCAATCCAAGATGAGGTTTACAACTGTGAGCCTACC TATTAAGAAGAAATTTATATCCAAAAGTATTAGCATCGGTGGTTGGAAAAGAAAAAAAATTGTCCAGGTTCCTAAACGAA ACAAATTAAAAATGTAAATTATGTTCTACTAAGCATTTTGGTTCCCCTCCTTTCCTAAAATCTAGAAAATCCCATTCTTG AAAATTGTGACTTGTGAGTTAGAACTTTGAAGCCTGTGGTTTTAACTGTTTTGGAGTTTGATTGACAATATCAGGCTGCA TGACTTGTGCTTGAGCTTCCTTTAGGTTTTTACTTTGTGACATAAGATTTTCCTTTTTTTTCTTTTTTATAACATAATTT ACATTGTTAACTCATTGACCATTAATTGGTGTTACTCAGATATACAAAGCTCAGAGGAACGCAATACTGTGTGTTTCTGC ATGTCTTCTCTACTGGTAAGTAAAGTGACAATTTTACATTGGAAAATATCTTTCCTTGTTTTGTAATTGAAGCTAAGTAA ATGCATATGGATGTGGTTACAGGTGTATCTACCGCATTTGCAAGTATCAGAAGGATCTCCAAAGTTTGGAGGAAGTGGAG AAGAGAGCCAAGTCCCAGTAGAGTAGTTGAGTCTTGTATGGACATGCCACAGTACCAATTCATGTTTTATGGCACAACCT TGTGATTCAGCTCTATATTTTGAACTTTCAATTTTTATGTGTTGTGCTGTTTGGACTTGCTCTTGACTTCTATCAGATCT ATGTAGTTTAGAGAGTCTTTTAGCCTGTATCTGTGAGATACTTCTCTTTTAGCTTCTATTAAATTTCAATCTTGTTATAC ATGATAGTGGTTGTGTTTGGTTAAGCAGCTTGGTTAAGCTGTACCTATGGGAATTCATAAGCTAATTAAGAGGATTATTG ATATAAGTTTAAAATAGCTTAGGTACATAAGTGTTTAATCAATAGCTAATCAACTTATTTCATTGCGACTTTTAGGTAGG TCACAAGCTAATTTTGCAAGCTTACTCACCTGCATAAACATTTATGCTATACGAAAAATATAAATAAGCTCTTTCTAACT CTCTCTCTCTCTTATATCTTACATTTATCTATTTTTTTCTTTCTATCTCTCACCATGTGCGAGTGTAGTAGAAGTATGGT TTTTTTTTAATAATGTAACAAAAATACTTATCAAAATAATATAACTTGAAAAATATTAGTCAAAGTGGGGAGGTTTATGC CAACCAAGATGGTGATGTGACAATGTAGGGAAATACGCTTTACACGAGGCTTGTCAGACGACGCAACTAATGGTACGAGA AGATGCAGCTAATGGTATG
CDS sequence (LotjaGi2g1v0191700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTTGCAATGGTTGATTCTCACCTACATAGTCGCCGCTGAAGCTGCCGTCGCGATTCTGCTAACCCTTCCCTCACC CAAGCTCCTCAGAAACCGCTTCGTCTCTCTGGTTTCGCTCATTCTGCAACCTGCGCTTTTCATCGTTCCCTTTGCTGGGT TCCAGCTTCTAGATATATACTGGAAGAATGAGCATCGGTTGATGTGTACCGGTGAGGTTTGTACTGCTGCGGAGAGAGAT CGATATGAGAAATCTATATACAAAGCTCAGAGGAACGCAATACTGTGTGTTTCTGCATGTCTTCTCTACTGGTGTATCTA CCGCATTTGCAAGTATCAGAAGGATCTCCAAAGTTTGGAGGAAGTGGAGAAGAGAGCCAAGTCCCAGTAG
Protein sequence (LotjaGi2g1v0191700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALQWLILTYIVAAEAAVAILLTLPSPKLLRNRFVSLVSLILQPALFIVPFAGFQLLDIYWKNEHRLMCTGEVCTAAERD RYEKSIYKAQRNAILCVSACLLYWCIYRICKYQKDLQSLEEVEKRAKSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 122 | 122 | 2.4E-5 | ||
| PANTHER | 1 | 128 | 128 | 6.7E-73 | – | |
| PANTHER | 1 | 128 | 128 | 6.7E-73 | ||
| Phobius | 1 | 5 | 5 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 6 | 25 | 20 | - | – | |
| Phobius | 26 | 36 | 11 | - | – | |
| TMHMM | 34 | 56 | 23 | - | – | |
| Phobius | 37 | 57 | 21 | - | – | |
| Phobius | 58 | 91 | 34 | - | – | |
| ProSitePatterns | 67 | 78 | 12 | - | ||
| TMHMM | 89 | 107 | 19 | - | – | |
| Phobius | 92 | 110 | 19 | - | – | |
| Phobius | 111 | 129 | 19 | - | – | |
| Coils | 112 | 129 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0191700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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