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LotjaGi2g1v0192600.1

Overview

Field Value
Gene ID LotjaGi2g1v0192600
Transcript ID LotjaGi2g1v0192600.1
Lotus japonicus genome version Gifu v1.2
Description Dihydroorotate dehydrogenase (Quinone); TAIR: AT3G17810.1 pyrimidine 1; Swiss-Prot: sp|Q9LVI9|DPYD_ARATH Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic; TrEMBL-Plants: tr|I1KJ84|I1KJ84_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0192600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:62416217..62422160) extracted from Lotus japonicus Gifu genome v1.2.

AAAAAAATAAAATAAAAATCTCACTCTCTCATGCAAGTTCAACCTTTGAAGCAAATTCTTTAATGTTTTTCCTCATAACT TATCCGATACTATCGTCCAAATGATGATCACGCAACCGCTGATTAATAATTGCACGTTCTCTCTGTCTCTAGTCTTCACC AGCTGAAACAAACAACATAGTTGTAACGTTGTAACTCAGATTCGATCAGATTCCTCTTTTTCTTCAAACCTTCACAGAAA ACTTTCCATTTTTACTTCAACAATGGCATCTCTAAGCATGACCCAGGTCAGAACAGGAAAATCTGCATCTGGGTTTTCCT TGAATTGCCCTGGGAAGGTTCAGGCTCGTCCCAGCAGAGTTGGTTTCAGGGTTTTTGCTTCAGAGGCTCAGGTTCCTGAG CCTGATCTCAGTGTTACTGTAAATGGGTTGCATATGCCAAACCCTTTTGTTATTGGGTCAGGTCCACCTGGAACAAATTA TACTGTCATGAAGAGAGCCTTTGATGAAGGGTGGGGTGCTGTGATTGCTAAAACTGTAAGATTTCATTGACAATCAGCTT AACTTGCATTAGCTTAATTTGTTTCTAGAGTACTATTTGATTTCTTGGTAGTAGTGAGTTTGTGTTATATGAATACAAGT GCCTGAAACTTTGTTATGCTGAAGTACTAATTGTGATTTATATATGCTCTGAAGTTGAGCTTTTGGACTTTTATGGTTTA TTCTGCTTGACTTGTATGGTGACTGTTGTGTACTTTATTCTGAAAGGCTAATCTTTTGAACTGTTGTGATTTGTTGTTCT GCAAATATTGGATGTTACCATATTTATATATATTCTCTGGAGCATCTGCTGTCCTATTAGTAAGTTGTTTTAAGCCTTAG ATCTTTATGGTTTATTAAAGACCTTAATACATAGTTGACCATTTGATGTTTCTTGTAGATCATTAGTTTTGCCTCATTGA ATCTCTGAATTATCATTGGCTCTGAATGCTATATTCAAAATTTACCTAGCTCCTGAAAAAATCCTTGGATCTTATTCAGT ATTTTATATTTTTAGGTTGTTGAGTTTTCAGTTTCAGATTTGTAAGGCAATGCTTGCTATAGTAGACTCACAATTGGGTC CAACTCTTCTCTAGACCCCACCATGGCTGGATCTTTATAGGGCCTTTTTTCCCTTTTTTCTTTCATTTTCCAAGAGGAAA TTGACATCGATGAATTGGAACCATTAACTTCTTCCTTTAGAAGTTATAAGGTGTAGCTGCATAGAACATAAATTTCATAT AAGTTCACCAAGGATAAAACAGGGTGAAAGGCATAGTCAATCTATTGATAGAGACACAAGCATAGAAAATTCACATGGTG CCACAATGAACTATGAGCTTGGTTTATTTTCTTAACTTTTGACATATGGGATGAAATGAATATTGACAACTACCACATGA TCAGTGTAGCACTGTAGCCTATTAGTTATATTTTTTATTGAAGTGGAAGAACTGCCTGCTTCTTAAAGGTTCTTTACGGG TAAATTGCTGTACCAAAATTACACGATTCATAAATAGTCTACTAGACAGTCTTAAAAATCAGAAGATTGAATCTTCAAAA TTGCTGTCTTTTTTAGTTAAATCCCTTGCCTTCAGTTGGAGAAAACTTAGCTGATCATTAAGCAGTCAACTACTGAACTA CCTACTCTGTTCATTCTTTTTTGGTCTGTTTTTGTTGTTTTGTCCAGCTTGAATAGAAAAGAAAATCTCAATAATAGTAC TAATTATATATTTGGGAAAATGTGCTGTAAAACCTCGAGTTAACATATCTATTTTATCATCATGATTTCTCCTCAATGTG AATATGTACCATAATACAACATTTCATTTCTGAATGCTTTTGAATTTTATAAATCTTACCAGGTATTGAAGATTTCCTGT GAAATTGTTTTCTCTTCTATCATCACATTCCCCCCCCCCCCTCTTGTGTTTCTTTCACCATCTTGAGTCTTCATTTATCG GAATGTAATTTTTTTATTCATGACAAGTCAAAGAATTATTAGCTGATAGTAAATTAATGATGATGAGATGATTTACTGTG AAGAAGTTGACAAGTTCCTGGTTTAAGTGCTGATTTTCCTAAGTTTGAAATTATGCTGAGTAAGAAAGGGTCATCAGGCA TGCAACTATAAATTAAATGCTCACATATTGCTTCTTGAAGTACTTGATGCCAAATTGGAATGCTGTATTCATTTTTTTTG CTAAATATTAGAATGGATTCTCAGAATATCCGTTTGAATAAAAAATGCGAAGTGGTTAGCCAAAGGGTGTTGTTGTCCTT GGCTCCTTTCTATGAAAAATTTGAACTATACCATTTTTTATGCTTGGGCCCCATATAATATAACTGGCATGATTCATGGT GTATAGGAAACTTTGAATTAGCAAGGCTCATACTTTGGAGTGATGTCTTTTGTCGTGCAATTGTTATTTCTTACAAAATG TGGGGCAATAGAGCTGTTATTTTAATATATTACATGTTTTTTAATATTTGTTTAGGGTTTGTTTCCTGATTAGGATTCTA AATTTCTGATTCCGTTGTTCTTAAATCAAGTTCAACCAATTACATCAATAGTTTCTTAATATATGCAGTGCCTTGTAATT CCTATAATTATTCTAAAATAAAATATTATAACTACCTTTCTTTTTATAAACCTTCTTGGAACAAAAAGTCACTCTGTTCC TCTGGCTAGTAAGAGCAGTAGAGCACACTTAAGTAACATTCCCTCGCAACCCTATTCATTTATAGAAGTCCTTGTCTACC ATATATTCAGCTATACCATGTTACTTGGTAGAGCTTGCCCTTAGAACGCTATTTCTTAATTCTTTTCATGATGACCATTC TATTTACTTTTGCAAGAAAAATTACTTTAATTGCACTTGATCTAAATACTATTGAATATATCGGTATTTTGGAAGCTAAC TGCGATATTTGATATATTTCTCTTGCTAGGTGTCACTTGATGCAGCAAAAGTTATAAATGTAACTCCTCGGTATGCCCGA CTACGGGCCGGTGCAAATGGCTCTGCAAAAGGAGAAATTATTGGGTGGGAGAACATAGAACTTATCAGTGATCGACCACT TGAAACCATGTTGAAAGAATTTAAGCAATTAAAAGAAGAATACCCAGACAGAATTCTCATTGCTTCAATCATGGAGGAGT ACAATAAGGCTGCTTGGGAGGAGCTTATCGACAGAGTTGAGCAAACTGGAATTGTAAGATGTGTTTCTTCCCTGATTTTA TTAAATTGAACATTTTTCTAAGTAAAACAAATTCTGATATCTGACCACTCTAATATTCCTTTCAGGACGCGATCGAGATA AATTTCTCCTGTCCTCATGGCATGCCAGAACGCAAAATGGGTGCTGCTGTTGGGCAAGATTGTGCTCTTTTGGAAGAGGT TTGTCGATGGATAAATGCAAAAGCTACAGTTCCTGTTTGGGCTAAGATGACTCCCAACATAACTGATATTTCAGAGGTTT GCTTTCTATCATGCCCTTTTTATTATACTCTAACCATATTCAACTATGTCAATGAAGTTGAAACTTGTTCAGTTTACGAA TTTATGCTTTACAATTACCACCGAATTTTCTAATTGTTTGTTTGTGGAAAAGTGGATGCTTACACATTTTCAATGGATTT ATACTTGTCAGATACTAAGGAACTAGAAAATTCATGTTTTCTAAGCCTCCCTTACATAAGTGACCATGCAAACTGTTTTA CAAGGCAAAAAAGATTCTTTACCAAAATTAAATGTTCTTCTATCTCTCCCTTTGCATGTCAAATGTCTATTGGTGAACTT ATTGATGCCAGTTTCACTTTAATTAGTTTATGTGTTATTCAGTCTTTCATGATTATCATGTTAGTAATGTCGGAGCTTCT GCTTATAGCCAGCAAGGGTTGCTCTAAGTTCAGGGTGTGAGGGAGTAGCTGCTATAAATACGATCATGAGCGTCATGGGA ATCAATCTCAATACATTGCGCCCTGAACCTTGTGTTGAGGGGTTAGCAATCTCACTTATAGAAAATTCATTGTTTTGTCC TGTTTTTTTAATTACCCTAAAATGTTATTTTGTCCAAATTTTGTTGCCAGATACTCAACTCCCGGTGGTTATTCTGCAAA GGCGGTCCACCCCATAGCTCTCGCGAAGGTGATGAGTATAGCGAAAATGATGAAGTCTGAGTTTGACAGTGAGGACTATT CACTTTCGGCCATTGGTGGTGTTGAGACAGGTGGTGATGCTGCTGAGTTTATTCTTCTTGGGGCAAATACTGTTCAGGTA TGATAAACAAATCACTTTATAGGCCTTATTGATAAACAACAGGACATTCTGTACTTTGGTCCACATGGTTTCTCCTTGTT AAACAAAAAAATTCTCCTAGTGAACCATAAAATTGAACTTGGGAATGGGTTCTCTAGTTCTTGATGTGGTTACCCGGGGT ACCTTGCATGTGGAGCTTTTGCAACAAAAAAATCATGATTTTTCTAGGCACCAATTGATTCAACTTTGAATTGTGAAATA TGCCTGTCAAATGTTGATGAAACAGGGCATGTTTTATAACTACTTTTCTCAGGTAACAATAGGTTTTTTTTTTTTCACCC AGGAAGCTGTGAAAATAAAATCTTTTTGGCTCACAAACTATAAGTTGTCTAAGTAGATGAGTTCTTTAAACTGTAGGTTT GCACTGGAGTTATGATGCATGGCTATGGTCTTGTGAAGAAGCTGTGTGTAGAGCTTCAAGACTTCATGAAAAAGCACAAT TTCACATCAATAGAAGATTTCCGAGGGTAAGAATTTACACTGATATATGGTTTCCAGTTAGATTATACAAAGATTGAAGA AAAGAAAGGCAAAGGCATGTTGACTTTTTCATCTCCTTTATTTATTGATTTATTTTAAATTTGATGAAAATCACAGGACC TCTCTTCAGTATTTTACAACTCACACTGACTTGGTGCAAAGGCAGCAAGAGGCAATTAGGCAGAGGAAAGCCATAAGAAA AGGTTTGCAGTCTGACAGAGACTGGACAGGAGATGGTTTTGTGAAAGAGAGTGAAAGCATGGTTTCTAACTGAGATGTAC AATTAAATTATGCAACCTTTCTTGTATGATTATCCACATAGTTCTTGCAAATGGAGCTGTAAAGAAATTATCTTCTACTA TTAATAATTGATTTATGTCCTTTTAAGAACAATGTAATATGTTTCTTGTCAAGAGTTAATAAAATAAAAGTATACTTAAC AAAATTCTAGGAAGACTACCATGAGAGGAACTTTTGGTTTCCTTAGCACTTACAATGGAGCTATTCTTTAGATATTTATG TTCCAGCAGTTGCAGCACACTAGTTTCCCTAGAAGAGTGTTGGGCCGCAAGAGAATTAAAACTCTGAGGGATCATCCATA TTGGGCTAACTTGAGCAATCCACAAGTGGGTTGAACACCACATCTTCACCCAAAACCTTAAGGCGTTAGGTGTATGTGTC ATCTCACTTATAAAGTGTTCATTATTCTCCTATTCTTCCAATGTGAGATTTCTTTCCTCACACCTGACATCCCAACATTC TCCCTTTAAGTGTGAGTCCATCTCAAGCGGAAGCCTCCAATCACTTGCACTGCCGTTGGATCTCCATCAACGGGACACGT CGCCTAACCACCATTGCTAGGAAGACTTTCGACACAAGGAGCCGTCACCATGATCGCACTCGCACTAACCATCGGCTCTG ATACCACTGTTGGGCCGCAAGAGAATTAAAACTCCGGGGGATCATCCACGCTAACTTGAGCAAGCAATCCACAAGTGAAA TGGACACCACATCTTCACCAAAATCCTTAAGGCATTAGGTGTATGGGTCCTCTCACTTATAAAGTGCTCATTACTCTCCT AATCTTCCAATGTGAGACTTCTTT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0192600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCATCTCTAAGCATGACCCAGGTCAGAACAGGAAAATCTGCATCTGGGTTTTCCTTGAATTGCCCTGGGAAGGTTCA GGCTCGTCCCAGCAGAGTTGGTTTCAGGGTTTTTGCTTCAGAGGCTCAGGTTCCTGAGCCTGATCTCAGTGTTACTGTAA ATGGGTTGCATATGCCAAACCCTTTTGTTATTGGGTCAGGTCCACCTGGAACAAATTATACTGTCATGAAGAGAGCCTTT GATGAAGGGTGGGGTGCTGTGATTGCTAAAACTGTGTCACTTGATGCAGCAAAAGTTATAAATGTAACTCCTCGGTATGC CCGACTACGGGCCGGTGCAAATGGCTCTGCAAAAGGAGAAATTATTGGGTGGGAGAACATAGAACTTATCAGTGATCGAC CACTTGAAACCATGTTGAAAGAATTTAAGCAATTAAAAGAAGAATACCCAGACAGAATTCTCATTGCTTCAATCATGGAG GAGTACAATAAGGCTGCTTGGGAGGAGCTTATCGACAGAGTTGAGCAAACTGGAATTGACGCGATCGAGATAAATTTCTC CTGTCCTCATGGCATGCCAGAACGCAAAATGGGTGCTGCTGTTGGGCAAGATTGTGCTCTTTTGGAAGAGGTTTGTCGAT GGATAAATGCAAAAGCTACAGTTCCTGTTTGGGCTAAGATGACTCCCAACATAACTGATATTTCAGAGCCAGCAAGGGTT GCTCTAAGTTCAGGGTGTGAGGGAGTAGCTGCTATAAATACGATCATGAGCGTCATGGGAATCAATCTCAATACATTGCG CCCTGAACCTTGTGTTGAGGGATACTCAACTCCCGGTGGTTATTCTGCAAAGGCGGTCCACCCCATAGCTCTCGCGAAGG TGATGAGTATAGCGAAAATGATGAAGTCTGAGTTTGACAGTGAGGACTATTCACTTTCGGCCATTGGTGGTGTTGAGACA GGTGGTGATGCTGCTGAGTTTATTCTTCTTGGGGCAAATACTGTTCAGGTTTGCACTGGAGTTATGATGCATGGCTATGG TCTTGTGAAGAAGCTGTGTGTAGAGCTTCAAGACTTCATGAAAAAGCACAATTTCACATCAATAGAAGATTTCCGAGGGA CCTCTCTTCAGTATTTTACAACTCACACTGACTTGGTGCAAAGGCAGCAAGAGGCAATTAGGCAGAGGAAAGCCATAAGA AAAGGTTTGCAGTCTGACAGAGACTGGACAGGAGATGGTTTTGTGAAAGAGAGTGAAAGCATGGTTTCTAACTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0192600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASLSMTQVRTGKSASGFSLNCPGKVQARPSRVGFRVFASEAQVPEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAF DEGWGAVIAKTVSLDAAKVINVTPRYARLRAGANGSAKGEIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIME EYNKAAWEELIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCALLEEVCRWINAKATVPVWAKMTPNITDISEPARV ALSSGCEGVAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALAKVMSIAKMMKSEFDSEDYSLSAIGGVET GGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCVELQDFMKKHNFTSIEDFRGTSLQYFTTHTDLVQRQQEAIRQRKAIR KGLQSDRDWTGDGFVKESESMVSN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF51395
41 376 336 9.33E-73 –
PANTHER
PTHR43073:SF2
43 422 380 1.3E-149 –
PANTHER
PTHR43073
43 422 380 1.3E-149 –
CDD
cd02940
48 356 309 9.6869E-180 –
TIGRFAM
TIGR01037
49 375 327 2.5E-51
IPR005720
Pfam
PF01180
49 360 312 3.7E-31
IPR005720
Gene3D
G3DSA:3.20.20.70
49 366 318 3.6E-107
IPR013785

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of
GO:0016627
Molecular function Oxidoreductase activity, acting on the CH-CH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0192600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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