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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0203000 |
| Transcript ID | LotjaGi2g1v0203000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chlorophyllase; TAIR: AT1G19670.1 chlorophyllase 1; Swiss-Prot: sp|O22527|CLH1_ARATH Chlorophyllase-1; TrEMBL-Plants: tr|G7KML3|G7KML3_MEDTR Chlorophyllase enzyme; Found in the gene: LotjaGi2g1v0203000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:64331829..64334093) extracted from Lotus japonicus Gifu genome v1.2.
CCCCACTTGGCTATCTACCACACACTCTGTCTTCATGAGATATTTATCAATCATATAAAACACATTTTCCTTGTCCTTAA TGAGATCTTTACAATTTATCTAAAATCCTACGGCTGAAAGCGCACGAAAAATCCAATACTGACGCCTGAGACAACAGCTT CTAACCTGTTTATGAACAGAATTAATGTATCCACATGCTTAGACTTTAATTACAACTTTAGAAGGAAAGGTTGTGGTGTC AGAATTGAGAGACAGAGTAGTGGTGATGGCGCAGCAGAGTGTTCAAACAGTATTGGCTACCACAGATGTTTTCCAAACTG GAGATATCAAATGGAAGCATTTCAATGTTGACACATCAAACACTTGCCCAAAACCATTGCTAGTGTTTACCCCCACAGTG CCAGGGACATACCCTGTTATATTGTTCTGCCATGGCTTCTGCGTTCTCAATAGCTTCTACTCCAGCCTCCTAGCCCATAT TACTTCACATGGGTTCATTGTTGTTGCTCCTCAGTTGGTATATCTAGCTACACCTTCTCTTTTATTTGCTTTTCAAGATC CCTCATCTACATATTTTAGTTGCAATATTTCATTGCAATTTTTAGTAATAAAACAACAACAAAAAGACAAATTGTATCAA ACCGTCCTTAACTATTGATTTGTTATAAAGTAGAAATTTAAGGTTGTTATCTACTAAAAACTCATGGAAAAATCATTAAA GAAATGGTTAATGGTTAAATTAATCTCTGATTTTATAAGCGAATTTGATTTTAATCCCCCGGCAGAAAAATGACATTTTA GTGGCGATCAGTTTTATAATTACTGATTGTTTTTTTACTGTCACTAAACGTCATTTTTCTGTCAAAAGACTAAAATCAAA TTCAATTACAAAATCAAAACTAATTTGACCATTAACTCTTAAATAAATGTATGTTCAAGTGGGTGCAGTCTACTGAAACA CCACTCATAACTTGTAAACATTCATACTCATGTGAAATAAGAGTTGTACTAACTTGAAAAAATACAAGAAAGTAATTGCC CAAAAATTAGCTGTTGTTATTCGCGCAGCTAATTCGCAGCTATTTGATAGCAATGTTCTTTAGTTTGCATCTGATCCGGT ATATTATATCATCTTTACTTATATATACTTAATAGATCAGTAAATTCGTTTTCCTACATTTTGTTACAAAATGAATGAGT AATGACATGATTATACAAGAATAGAGAAAAATATGTGATAAATCATAGGGGAATGGAAAGGGGACAAAGTGGATAAAATA AAATTACATTTTAATTACACATTCCATGCAAAATTTACACATTCAAACATTAATTTACTAACATAGCTTTTAATTTTCCT TTTTCATGTTAGTTTTGCATGGGCCTCCCTATGCTTGGACTCTGTGAAGTCAAATTCGCAGGAAAAGTTGCAGATTGGAT AACAGAGGGACTTCAAGCACAGCTTACAAAACACGTTAATGAAAACATTGAAGCCAAATTGGAGTCATTGATTCTAGCAG GTCACAGCAGAGGTGGAAAAACTGCATTTGCAGTAGCACTTGGTTATGCCAAGACTAACCTCAAATTCTCAGCACTTATA GGCATAGACCCAGTGGCTGGCCTAAGCAAGTGCAAAATCTGCAGGACACTTCCACACATTCTAACAGGTGTACCACAATC CTTCAATTTAAACATGCCGGTCGTGGTAATCGGCACCGGGCTAGGCCCAGAGAAGGCTAGTTGTTGTTCTCCTCCGTGTG CCCCTGACGGCGTGAACCATGTGGAGTTCTTCACTGAGTGCAAGCCTCCTTGTGCACATTTTATCACAACGGAGTATGGT CACATGGACATGTTGGATGATGATACACCAGGGATTATTGGGGGCACAGTGAAGTGCATCTGTAAGAATGGAACTGGTCC TAAGGATTTGATGAGAAGGACAGTGGGAGGGTTGGTTGTTGCTTTCTTAAGGGCTTATTTGAGTGCTCAGTGGAAGGATC TGAATGCCATTTTAGCGGATCCTAGTATTGCTCCTGCCAAGCTTGATGACCCTGTTGTGTATTTAGCTGCGTGAAGCCAA AAATTTGTCTTTCAATTTCAACATAGTTGTTAGTTTTATTCAATTTTTTGTAATTGAATGGGTTTTTGTGTGGGACTATC CTCAAATAGTTAGCTAGCTTAACTCAAGTTTCTATCTTGCATGTCCACTTTGTTATGAGAACACAAGGGAACCTTACATC ACATTTTTACCTAAAAATTAAACCA
CDS sequence (LotjaGi2g1v0203000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCAGCAGAGTGTTCAAACAGTATTGGCTACCACAGATGTTTTCCAAACTGGAGATATCAAATGGAAGCATTTCAA TGTTGACACATCAAACACTTGCCCAAAACCATTGCTAGTGTTTACCCCCACAGTGCCAGGGACATACCCTGTTATATTGT TCTGCCATGGCTTCTGCGTTCTCAATAGCTTCTACTCCAGCCTCCTAGCCCATATTACTTCACATGGGTTCATTGTTGTT GCTCCTCAGTTGTTTTGCATGGGCCTCCCTATGCTTGGACTCTGTGAAGTCAAATTCGCAGGAAAAGTTGCAGATTGGAT AACAGAGGGACTTCAAGCACAGCTTACAAAACACGTTAATGAAAACATTGAAGCCAAATTGGAGTCATTGATTCTAGCAG GTCACAGCAGAGGTGGAAAAACTGCATTTGCAGTAGCACTTGGTTATGCCAAGACTAACCTCAAATTCTCAGCACTTATA GGCATAGACCCAGTGGCTGGCCTAAGCAAGTGCAAAATCTGCAGGACACTTCCACACATTCTAACAGGTGTACCACAATC CTTCAATTTAAACATGCCGGTCGTGGTAATCGGCACCGGGCTAGGCCCAGAGAAGGCTAGTTGTTGTTCTCCTCCGTGTG CCCCTGACGGCGTGAACCATGTGGAGTTCTTCACTGAGTGCAAGCCTCCTTGTGCACATTTTATCACAACGGAGTATGGT CACATGGACATGTTGGATGATGATACACCAGGGATTATTGGGGGCACAGTGAAGTGCATCTGTAAGAATGGAACTGGTCC TAAGGATTTGATGAGAAGGACAGTGGGAGGGTTGGTTGTTGCTTTCTTAAGGGCTTATTTGAGTGCTCAGTGGAAGGATC TGAATGCCATTTTAGCGGATCCTAGTATTGCTCCTGCCAAGCTTGATGACCCTGTTGTGTATTTAGCTGCGTGA
Protein sequence (LotjaGi2g1v0203000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQQSVQTVLATTDVFQTGDIKWKHFNVDTSNTCPKPLLVFTPTVPGTYPVILFCHGFCVLNSFYSSLLAHITSHGFIVV APQLFCMGLPMLGLCEVKFAGKVADWITEGLQAQLTKHVNENIEAKLESLILAGHSRGGKTAFAVALGYAKTNLKFSALI GIDPVAGLSKCKICRTLPHILTGVPQSFNLNMPVVVIGTGLGPEKASCCSPPCAPDGVNHVEFFTECKPPCAHFITTEYG HMDMLDDDTPGIIGGTVKCICKNGTGPKDLMRRTVGGLVVAFLRAYLSAQWKDLNAILADPSIAPAKLDDPVVYLAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 311 | 309 | 8.1E-133 | – | |
| PANTHER | 3 | 311 | 309 | 8.1E-133 | – | |
| Gene3D | 4 | 300 | 297 | 1.3E-21 | ||
| Pfam | 11 | 308 | 298 | 2.8E-114 | ||
| SUPERFAMILY | 17 | 287 | 271 | 1.8E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Chlorophyll catabolic process | The chemical reactions and pathways resulting in the breakdown of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, into less complex products. | ||
| Molecular function | Chlorophyllase activity | Catalysis of the reaction: chlorophyll + H2O = phytol + chlorophyllide. |
Expression pattern of LotjaGi2g1v0203000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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