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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0207400 |
| Transcript ID | LotjaGi2g1v0207400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase; TAIR: AT1G58060.1 RNA helicase family protein; Swiss-Prot: sp|F4I9Q5|DEXH7_ARATH DExH-box ATP-dependent RNA helicase DExH7, chloroplastic; TrEMBL-Plants: tr|A0A1J7G4L6|A0A1J7G4L6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0207400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:65152466..65158111) extracted from Lotus japonicus Gifu genome v1.2.
TAGACAAATATACAAGGAAACAAGGTCTTAGGGGGAGGAGGAGTTGCTGAACTTTGATGGTGAGAGTGAGAAAGCACCAA AAATGGCGCCCAAAAAGAATCAGAAACAGACCCGAAAGCCCCAACCTTCTTCATCATCATCATCATCATCATCAACCGCT CCAAGGCTGCAAATCTCAGCCGAAAACGAGAACCGTCTCCGCCGTCTACTCCTCAACTCCGCCCCACATCCTCCTCCTCC GACGGCGGCGGACGACGACACCCAAACCCTAACCCTAACCAAATCCTAGAAGGCCAAGAAGCTCAAATCCATTTACGAGA AACTCTCCTGCGAAGGTTTCACCAACCACCACATCGAGCTCGCTCTCTCCGCTCTCAAAGACGCCGCCACCTTCGAATCT GCCCTCGATTGGCTTTGCCTCAATCTGCCCAGTGATGAACTTCCCCTCAAATTTTCCACCGGAGCTTCGTCGTTTGACAA AGGGGGTTCTGTTGGTGTTGTTGTTTTCCAAAATTCAACAACCAGAGCTACCAAGGATGATGAAGCAGAAGCAGAAGCAG AAGCAGAAGCAGAAGAAGAAGCTGTAGAAACTCAGTTTTTGATCAAGAGAAGACAGTTGAATGATGGTGGTGGTGGTGGT TTAGATTCTTCATTTCAAAAGTCTCAAGCTGATTGGATTAAGCAATATGTGCAGCAACAGGAAGAGGAGGAAGAGGAATC TGAGAATTGGGAGGATGAATATGACTTCAATGGCGGTGCGAAAAGTAATAGGATCAAGCAACAACCTAGGTCTTATGATG TTATTGCTCAAGAGTACGGGCTGCGAGGTTGGAAGCTGCGAGGGCCAAGGAAAAAGGGGATAAGAAACAAAAGGAGCAGG CGGGGATTGTCATCCGGGAATTGAAACAGGAGATGTCTGCTCTTGGATTGTCATATGAAAATTTGGAGTTAGAATATAAT GAGGAGCATGGTAAGATCAGTTCTGACCCTGCATCTGAGAGGGGTAATGAGCCTTTTGATTGTGTTGGAGATAATACCCC ATGTGATGTGGGAGGTGATTCGGTCGTTGCTTTGCCTTCTGATGGAAAATTAGTTGATGGAGATGATGTGGAGGAGGAGG ACCATAGCAAGGAGGAAAATCTACATGTTGAAAGGGATTCTGCTAAAGGAGAGGGTGGAGACATTGAGCTTGGTGGGTTC TTCATGGAGGATGTGGCATCCAATGAAATGTTGAAAGCGCAGAAGCAAGAGAAAATTAAGAGGTTATCGGAGACGAAGGA TAGTAGGAAGGAGGAAGATCCACATGTTGAAAGGGATTCTGCAGAAGGAGAGGGTGGGGACATTGAGCTTGGTGGGCTCT TCATGGAAGATGAGGCATCCAATGAAAAGTTAGCTTCTGATATTTTGAAAGCACAGAAGCAAGAGAAAATATTAAGAGGT TATCTGAGGAGAAGAAGAGTTTGGAGAAATTAGATGGCATTTGGAAGAAGGGGGACCCTCAAAAGAGTCCAAAGGCTATT CTTCATCAAATGTGCCAGAGATCAGGGTGGGATGCTCCGAAGTTCAATAAAGTTCTTGGCAGGGGAAAGAGTTTCTCCTA TACTGTGAGCATTTTGCGTAAAGCTAGTGGGAGGGGCAAGAGCCGAAAAGCTGGGGGGCTGGTCACATTTCAGCTTCCAG ATCAGAATGAGACCTTTGAATCTGCTGAGGATGCACAGAATAAAGTGGCAGCATATGCTTTGTTCCAGCTGTTTCCTGAT ACCCCGGTTCATCTTCCGATTACCGAGCCTTATGCTTCATTTGTTATTAAGTTGATGGAAGGCGAATCATCAACCAAGCT AGAAGACAGTGAGGAAGACCATAGGTCTCGTTTTGTGGATTCATTATTACTTGGCAATGGTTCTGGTGAAACTGCGTCTG TTGATGTTACAGATTGCAAGCCTCCTGAATCCTTTGTTAGACAAGATGAAAATAAAAATTCAACCCATGCTAGTCCTCAA CCATTTTCTCAGAGAGAAATCCATATGAAGGAAATGGAGAGTGCTGAGTTGAGAAAAGCCCAAGGTAATAAAATGAGAAG CCAAAGATACCAGGATATGTCAAAATTTAGAGCTACACTTCCCATTGCTGCACTAAAGGGTGATATATTGCAATTACTAA AGGAAAATGATGTACTTGTCGTTTGTGGGGAAACAGGCTCTGGAAAGACAACTCAGGTTCCACAATTTATATTGGATGAC ATGATTGAGTCAGGACTTGGCGGACACTGTAACATTGTTTGCACACAGCCAAGGAGAATAGCGGCTATTTCTGTGGCTGA AAGAGTTGCAGACGAGAGGTGTGAACCTTCACCGGGTTTGCAAGGTTCCTTGGTTGGCTATCAAGTTCGTCTTGATAGTG CCAAGAATGAGAAAACAAAGCTTCTGTTCTGTACAACTGGCATCCTTCTGAGAAAATTGATGGGGGACCGAAACTTGACT GGCATTACTCATATCATAGTTGATGAAGTACATGAGAGGTCTTTATTGGGTGATTTTCTTCTAATTGTGTTAAAGGATCT AGTTGAGAAGCGGTCCACTGAAAGTTCTACGAAACTGAAGGTCATTCTAATGTCTGCGACAGTTGATGCAACTTTATTTT CAAGATACTTTGGCCATTGCCCTGTAGTTACTGCAGAAGGTAGGACTCATCCAGTGACAACATCCTTTCTTGAGGATATA TATGATCAGATTAATTATCGACTTGCTTCAGATTCTCCAGCTTCTTTAGCATATGGAGGGTTTCCCAAAGGACATAATTC ACAGAAAGGTTCTGTGACAAATAGCAGGGGGAAGAAGAATCTAGTCTTATCTGGATGGGGTGACGAGTCTCTGCTTTCTG AAGAATCTTCTAACCCATATTTTGTTCCAAGTAATTATCAATCATACAGTGAACAAGCCCAACAAAATCTAAAAAGATTG AATGAAGATGTCATTGATTATGATCTTCTTGAAGATCTAATATGTTTCATTGATGAAACTCATGGTGAGGGTGCCATCCT TGTATTCTTGCCTGGAGTGTCTGAAATAAACAATTTATATGATAAGTTGGTGGCTTCATACCAATTTGGTGGGCAATCTT CTGATTGGGTCATTCCTTTGCATTCATCAGTTGCATCAACTGAACAGAAAAGGGTGTTTCTACGCCCTCCTGGAAATATA CGTAAGGTTGTTATAGCCACAAATATAGCAGAGACCAGCATAACAATAGATGATGTGGTATATGTAATTGACTGTGGAAG GCATAAGGAGAATCGATATAATCCACAGAAGAAATTGTCTAGCATGGTTGAAGATTGGATTTCTCAAGCAAATGCAAGGC AGCGTCGGGGTAGAGCTGGATGGGTAAAGCCTGGAATTTTCTTTTGCTTGTATATACTCGCCATAGATTTGAAAGACTCA TGCGCCCTTATCAGGTTCCTGAGATGCTTCGTATGCCATTAGTCGAATTGTGTCTGCAGATTAAGTTACTATCACTTGGA CATATAAAACCATTTTTGTCTGAGGCTTTAGAACCTCCCAAGAATGAAGCAATGGATACAGCAGTATCTTTATTGTATGA GGTAGGTGCTCTTGAAGGGGATGAAGAGTTGACGCCTCTTGGACATCATCTGGCAAAACTTCCTGTTGATGTATTGATTG GGAAGATGATGCTGTATGGTGCAATATTCGGTTGCTTGTCTCCTATTCTTTCGGTTTCTGCATTTTTCAGTTACAAGTCT CCATTTATTTATCCTAAGGATGAGAAGCAAAATGTTGAAAGAGCCAAATTAGCATTGTTAAATTATAAGATAGATGGATC TGGTGACACAAATGACATGGATCGTCAATCTGATCACTTATTATTTTATTAATGATGAAAGCTTATGAAAAATGGGAGAA AATTTTGAATCAGAAAGGAACTAAAGCCGCGCAGCAATTCTGCAATTCATATTTCTTGAGCAGCTCTGTGATGTTAACTA TAAGGGAGATGAGGGTGCAGTTTGGAACTTTGCTAGCAGACATTGGTCTCATCTCTCTCCCAAAGGATTATCAGAAGGAT GGAAAAAAGATAGCGAAACTTGACAGTGTTCTTTGTGATGCATCACAACCATTTAATATATATTCACATCATTCTTCAGT TCTGAAGGCTATACTATGTGCAGGTTTATACCCCAATGTAGCAGCTGGTGAGCAAGGCATTGTTGCAGCAACTCTCAGCA GCCTTAAGCGGTCTTCGAGCAATGCATATTCTGGTCGCACGCTCTGGTTTGATGGAAGAAGAGAAGTTCATGTCCACCCT TCTTCTATCAACAGTAACACAAAAGCATTCCAATACCCCTTTATTGTGTTCCTTGAAAAGGTTGAAACAAACAAGGTGTT TCTGCGAGATACTTCAGTGATTTCGCCATACTCTATTTTGCTCTTTGGAGGGTCAATTAATGTCCAGCATCAGACTGGAC TGGTCGCCATTGATGGATGGTTGAAATTGACTGCACCTGCCCAAATAGCTGTCTTGTTCAAGGAGTTACGATTGAGACTC CATTCCATTCTGAAGGAGCTTATCAGAAAACCGGAGAACGCCATTGTCGTGAATAATGAGATCATTAAGTCTATTATCAA TCTGCTTTTAGAAGAAGGCAATGTGCCTAAATGATTGAGCATCAACTCATGTGATCTAAAGCATTTATTTAAACTAAACT CTGCCAGTTATTCTGTTTGTGTAAAAGTAACTGAGATTTCTCCTCCCTGAAAAGGAAAAAACCCCTTTTGGACCTTGTTG CTTCTTCCAGTCATTTGACCATTGAATATGACAAGTGAAGTAAATTAACCAGTTCTGATCATGTTTGTGACTGTAGTTCA ATGGTAAAGGAGTAGCATATTCAGTTTCTAGCTAGGTATAGGTTTTATTCTAGCATAGACCAGGTGAACATTGAGAAAGC TGCCTCCTTTTGTCGTGACTGTTGTGTTTGCAACATAATAACATATACACAATTACACATTTTAATTCTCATGAAATGCT AAATCACTTGCTGAAAGAAATCATTGGAAAATCTTTTCCTGGATTTGGAATGAAATATGAAATGGTTTTAAAATGAAATG AAGCTTATGTGACGTTTTCTCTTTGATCCTAAAGGCTAAATGCAAGTGTTTTTCATTCTCTCACAAGCATGGATCCCCGA TTCTTTGTGAGAATGAGATTGTGAAGTTTGTGTTTATTGGGTAACAAGGATTGGATTGTATATAATAGTTTCATATTTTT GTTTTCTACATTTTCTGATGTATATGCTAAATTTCGTGCTTCTTGCATCTTCAGTTGAGTTTTGAGATATGTGAAACTAT ATTTGTGTTGGTGTAAATTGTAAGTTACGGAAAATCAAACATAACAAGTAGCTCTTTTCTTCTAGGAATTGAGGTAGCTA AATGGTATATTGATGATGACATATTGAATCTTGTTTTTCTTTATCTATATTAGATTGTTTTTATTCAGTTTATGGTATGT TTAATTCTTATGATGTGTTAGGTTTCCTGTTTGTATGATCTTAGGTATTAAGGGGAAGTACTGACATGTAAACTTTAATA ACAGAACTTCATAAACAAACCTGAGGTTTTAATCACGAAAGTATTT
CDS sequence (LotjaGi2g1v0207400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAAAGCTTATGAAAAATGGGAGAAAATTTTGAATCAGAAAGGAACTAAAGCCGCGCAGCAATTCTGCAATTCATA TTTCTTGAGCAGCTCTGTGATGTTAACTATAAGGGAGATGAGGGTGCAGTTTGGAACTTTGCTAGCAGACATTGGTCTCA TCTCTCTCCCAAAGGATTATCAGAAGGATGGAAAAAAGATAGCGAAACTTGACAGTGTTCTTTGTGATGCATCACAACCA TTTAATATATATTCACATCATTCTTCAGTTCTGAAGGCTATACTATGTGCAGGTTTATACCCCAATGTAGCAGCTGGTGA GCAAGGCATTGTTGCAGCAACTCTCAGCAGCCTTAAGCGGTCTTCGAGCAATGCATATTCTGGTCGCACGCTCTGGTTTG ATGGAAGAAGAGAAGTTCATGTCCACCCTTCTTCTATCAACAGTAACACAAAAGCATTCCAATACCCCTTTATTGTGTTC CTTGAAAAGGTTGAAACAAACAAGGTGTTTCTGCGAGATACTTCAGTGATTTCGCCATACTCTATTTTGCTCTTTGGAGG GTCAATTAATGTCCAGCATCAGACTGGACTGGTCGCCATTGATGGATGGTTGAAATTGACTGCACCTGCCCAAATAGCTG TCTTGTTCAAGGAGTTACGATTGAGACTCCATTCCATTCTGAAGGAGCTTATCAGAAAACCGGAGAACGCCATTGTCGTG AATAATGAGATCATTAAGTCTATTATCAATCTGCTTTTAGAAGAAGGCAATGTGCCTAAATGA
Protein sequence (LotjaGi2g1v0207400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMKAYEKWEKILNQKGTKAAQQFCNSYFLSSSVMLTIREMRVQFGTLLADIGLISLPKDYQKDGKKIAKLDSVLCDASQP FNIYSHHSSVLKAILCAGLYPNVAAGEQGIVAATLSSLKRSSSNAYSGRTLWFDGRREVHVHPSSINSNTKAFQYPFIVF LEKVETNKVFLRDTSVISPYSILLFGGSINVQHQTGLVAIDGWLKLTAPAQIAVLFKELRLRLHSILKELIRKPENAIVV NNEIIKSIINLLLEEGNVPK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 238 | 237 | 1.0E-42 | – | |
| PANTHER | 2 | 238 | 237 | 1.0E-42 | – | |
| Pfam | 91 | 189 | 99 | 2.5E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0207400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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