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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0227600 |
| Transcript ID | LotjaGi2g1v0227600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAC domain protein; TAIR: AT4G29230.2 NAC domain containing protein 75; Swiss-Prot: sp|O49459|NAC73_ARATH NAC domain-containing protein 73; TrEMBL-Plants: tr|A0A151TKC8|A0A151TKC8_CAJCA NAC domain-containing protein 8; Found in the gene: LotjaGi2g1v0227600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:68530486..68534590) extracted from Lotus japonicus Gifu genome v1.2.
ATGAATAAGATGAACAACTTGAGTTCTGTAAGCAGCTCTGATCTCATAGATGCCAAGCTTGAAGAGCATCAGTTGGGTGG ATCCAAGCAGTGCCCCGGTTGCGGACACAAGTTTGAAGGAAAGCGGGTAAGAGAACAAATATTCTTGCCTTCAATGAAAA GCCTTTGACATTAAGATATGAAGAATCACACAAATAGAAGTGTACTAATATTAATTAATATGCTTATTATGCTTGTTTTG CTATTGCTAAAGTTTGTGTATTTGTTAAAGGCTTCTTCACCCTCTTTATTTCTCTTTATTTCCCTTTTTCCCATGTTTCT CTTCTTTCTCTTCCTTACCTCACTCACTCTTTAGCTTCTTTTTTTCTGTTTTTTAATTACTTGAATTAATTTCTATGGAG ATTGATGCAGGATTGGCTAGGTCTGCCAGCAGGAGTGAAGTTTGATCCAACAGACCAAGAACTAATAGAGCATCTTGAAG CCAAAGTGGAGGCAAGGAACAACATGAGATCACACCCTTTGATTGATGAGTTCATCCCCACTATTGAAGGAGAAGATGGA ATTTGTTACACCCATCCTGAGAAACTTCCAGGTGGGATATAAAGTGATGTAATGAAATTCAAGTCACCTCTCTTTTTTCT ATTTGATCATTCTGCTACATTTGATTCTAAAACCAGAATCAATTATGGGAATAAGCTTTTATAAGTAGCTTCTGGGTTTC AAAATTGACTCTGAAAAAAGAGAAGCTAATACATGAGTATTTCTGATTCTTTTAAACAATTTCATTTTTATCCATATAAA TTATTATTATTTAATTCCTAGTTAGGTTTTACTATATGTACAAAAACCTCTCTTGTTGTATTAATTAAGAAGAAACTTAC ACTCAACCAAAAGAGTTTGGGTTTCCTCTTGCAGTTCACCTAAGTCACCTAACTTTGATTTTTGTTGTTGTGCTTCATAG GAGTAACAAGGGATGGCTTGAGCAAGCACTTCTTCCACAGACCTTCAAAGGCATACACAACAGGCACAAGAAAGAGAAGA AAGATCCAAAATGAATGTGACTTGCAAGGTGGAGAAACCAGATGGCACAAGACAGGTAAGACCAGGCCAGTGATGATGAA TGGGAAACAAAAAGGCTGCAAGAAAATCCTTGTCCTCTACACCAACTTTGGGAAAAACAGAAAGCCTGAGAAGACCAACT GGGTGATGCATCAGTACCATCTTGGCCAGCATGAGGAGGAGAGAGAAGGGGAGCTTGTGGTGTCAAAGATATTTTATCAA ACACAGCCAAGGCAATGTAACTGGTCAGATAGGAGTGCCTGCACAACAGGTGAAGGAAGTGGGGAATTGCCAAATGGTGG AAGAAGAGACAGTGGAAGTGGGAGTTGCTCTTCCAAGGAAATTGTTCCTACTCACAGAGATGAAATGACTTCTGTTATTG TTAGTGGTGTTAATCCAATGACAGGCTTCACTCATGCATTGGACATTCAACAACAGCTGAAATCTGATCATTTCAGCTTC ATCCCTTTCAGGAAAAGCTTTGATCATGAGGTACATTCACAACTCTCTTTCTCTTTTAATATATATATCACAGCACCTTC CCTATGATTGATGAACATGATGTTTCACTTAATTGCAATCTATATTGATTGGTAACCAGTACCAAAAAGTGAAAAATATG AAAGGGGTTAAGGTAGCTGCTGACATAAACCATTGCTTGCACACACAGCATGCAATTGTATGGACCTCATATGATCCTAA ATCAGTGTCATCCAACTACTATATGCTTAATTTGTTTACCTAACAAGGTCTAATATAAAAAATCCACGGCACAAAGCTAG CAAGAGCTAGGATTTGGATTCCCTATAATCACAAAATCACACAGTCAAACATTTTTTAGCCGTTCGATTTTGATCAGACA TAGTCATCCAATTTTAATCAGACGGCTAGAAACACTTGAATATGTGTGTGCAGGATTCCGTGACTTCAAAGAATCCATTC TAACTATCTATCTATCTATATTGTTGACAGTTGAATTTTGATGCAATGCAGGTTGGAATAGTAGAGGCTTCAACAGCAAG GGAAGTGCAAGCATCAGGCTCATGCGAAGAGGTGCATGAACGGCATCGACAACATGTAACTCATCATCATCAACAACAAC AACAGCAACAACAACAACAACATGTAACTCATCATCATCAACAACAACAGCAGCAGCAGCAACATCACCATCAGATTGCA AACTCGGCTTTTCATATCAGTAGGCCTTCACATCCCATCTCCACCATAATCTCTCCGCTTCCAGCTCCACTACACCACAC GTCCATCATCCTCGACGAAAACTCCTACCATGTTAATAGAGTAATGCTCCAAAACGATAATTTTCAGGTAATTAATCACC ACTCAAAGTCTTTCTCTTAAACATGATTACTTGATTATAACTTGTATTGTTCTTACTTAAGTAGCAGCAGTGACAATAAA GAAAGAGTAAAAGGTCAAGCTGGTCAAAGGGTCACGCTAGAAAAGGAGTGTGCTTCATTTTAGTCTATATTCATAAATAT ATTTTTATTACTACATTTTTACAATATACTCTTCATGTATTTAAATTAATTTTCTAAAATGATTTTGAAATCTGTGAACA AAACTTTTCCTAGTCCACAGTAGACAAAGTCGTGTGAATTTAATAATAGTTAAAAATATAAAAAACTCATTGATTGTGCC TAAGAAAAATTTATGTAAGAACTATTTGTTCATCAATATTATGTAACCTTTAATAATTAATCATAATAATAAAGGAAAGG TAGACTTATATTAGTGCTAAAAGAGTGAGTCACTATACACTAAGCATGTGAAGATACAAAATGGAGTGAATCTGCACTCT GCATGGTATTGTGCACATGAGTCAGCTTTTGTGAATGCTTGAGAAGCATGAAACTATCTTTTCACTTTTTGATTGGTGTT CAACATGATGATTAAGATGTTTGTGCATTTGTGTTGAATTTGATTTGTTGACCTTGGAAATGGATCTGTGATATTTACAC ACATAGCAGCAACAGCAGCAACAGCATCATAAGCTAGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTCATCATGGGGTG CACTTCAAGTTCAACTGATATCAAACCGGTAAGAAACAACTTTTTGACTCGGAATTATATGAACTTTGTTAGTCATAATG CCCATAGCTAGAGTGAAAAAGAGAAAAGAGGCCACCGAATAAAATAATGAAAACAATTTCTTGCTTTCTATCATTGTATA GGGAAAGAACAATAGATAGAATGTGGGACCTATTGAAGTTAAAAGATCTTCTCTTTAGTTCATATTTGAATTAATGTTAC AAGAGAAACTTATGCTATTTCCCATTAAACTACTACTAAAATGTTTAATTGTTTTTTCTTTATATAGAAAAAGCTACCCT TCTTCTTTGATCAAGTGATCATTGTTTTGTATAATACATGAATTTATATTTTATATCTTAGTTTTTTTTTATAAGCAAAT GAATTTACATTTTAGTAGTATTTTATATCTTAGTATAATATATAAGAAAATGAAAACACAACCTTCCAAAATTAGAGAGA TTATGAGAACTTTTCATTTTTTTAGTATTACATATTCTCATAAACAAGCTGCGTTGGAAAAGTGTTAGCGACTTAATTGA TTTATTTTTATTTACTGGCCATGTTAGAAATGGGAACATGAAATCAATTTCGACCACTTCATAATGTTTTGTTTCTTAAG ACTTAAGAGTAAAATTGAATAAATGATTTGTTTCTATCTATACAGTATAGACATATCCAACCGATACTTAGAGAAAGAAA AGAAGAAAATAGAAAGAACGAACAAGTGTAATATATGATAGAAGAGAAAAATAAGGTTTATGTTAAATGTCTATATTATT TATATACCTGGGTATCATTTTTTATTAAATTATAATCCATAAGCTAGCTCTAACCCTAATTATATTCTCATTTTGTATGA ATGATTTCCTTTCAGGGGTCAACTATCACAAACCCACAAGAAGCTGAATGGTTGAAGTACTCTTCTTATTGGCCAGACCC TGACAACCCGGATCATCATGGGTAG
CDS sequence (LotjaGi2g1v0227600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATAAGATGAACAACTTGAGTTCTGTAAGCAGCTCTGATCTCATAGATGCCAAGCTTGAAGAGCATCAGTTGGGTGG ATCCAAGCAGTGCCCCGGTTGCGGACACAAGTTTGAAGGAAAGCGGGATTGGCTAGGTCTGCCAGCAGGAGTGAAGTTTG ATCCAACAGACCAAGAACTAATAGAGCATCTTGAAGCCAAAGTGGAGGCAAGGAACAACATGAGATCACACCCTTTGATT GATGAGTTCATCCCCACTATTGAAGGAGAAGATGGAATTTGTTACACCCATCCTGAGAAACTTCCAGGAGTAACAAGGGA TGGCTTGAGCAAGCACTTCTTCCACAGACCTTCAAAGGCATACACAACAGGCACAAGAAAGAGAAGAAAGATCCAAAATG AATGTGACTTGCAAGGTGGAGAAACCAGATGGCACAAGACAGGTAAGACCAGGCCAGTGATGATGAATGGGAAACAAAAA GGCTGCAAGAAAATCCTTGTCCTCTACACCAACTTTGGGAAAAACAGAAAGCCTGAGAAGACCAACTGGGTGATGCATCA GTACCATCTTGGCCAGCATGAGGAGGAGAGAGAAGGGGAGCTTGTGGTGTCAAAGATATTTTATCAAACACAGCCAAGGC AATGTAACTGGTCAGATAGGAGTGCCTGCACAACAGGTGAAGGAAGTGGGGAATTGCCAAATGGTGGAAGAAGAGACAGT GGAAGTGGGAGTTGCTCTTCCAAGGAAATTGTTCCTACTCACAGAGATGAAATGACTTCTGTTATTGTTAGTGGTGTTAA TCCAATGACAGGCTTCACTCATGCATTGGACATTCAACAACAGCTGAAATCTGATCATTTCAGCTTCATCCCTTTCAGGA AAAGCTTTGATCATGAGGTTGGAATAGTAGAGGCTTCAACAGCAAGGGAAGTGCAAGCATCAGGCTCATGCGAAGAGGTG CATGAACGGCATCGACAACATGTAACTCATCATCATCAACAACAACAACACAGCAACATCACCATCAGATTGCAAACTCG GCTTTTCATATCAGTAGGCCTTCACATCCCATCTCCACCATAA
Protein sequence (LotjaGi2g1v0227600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNKMNNLSSVSSSDLIDAKLEEHQLGGSKQCPGCGHKFEGKRDWLGLPAGVKFDPTDQELIEHLEAKVEARNNMRSHPLI DEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMMNGKQK GCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEREGELVVSKIFYQTQPRQCNWSDRSACTTGEGSGELPNGGRRDS GSGSCSSKEIVPTHRDEMTSVIVSGVNPMTGFTHALDIQQQLKSDHFSFIPFRKSFDHEVGIVEASTAREVQASGSCEEV HERHRQHVTHHHQQQQHSNITIRLQTRLFISVGLHIPSPP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 311 | 308 | 4.5E-159 | – | |
| PANTHER | 4 | 311 | 308 | 4.5E-159 | – | |
| SUPERFAMILY | 42 | 209 | 168 | 1.11E-38 | ||
| ProSiteProfiles | 47 | 209 | 163 | 32.812 | ||
| Pfam | 48 | 190 | 143 | 1.6E-24 | ||
| Gene3D | 56 | 214 | 159 | 3.2E-26 | ||
| MobiDBLite | 219 | 251 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi2g1v0227600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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