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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0235700 |
| Transcript ID | LotjaGi2g1v0235700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | envelope membrane protein, chloroplastic; TAIR: AT4G31040.1 CemA-like proton extrusion protein-like protein; Swiss-Prot: sp|A6MVV9|CEMA_RHDSA Chloroplast envelope membrane protein; TrEMBL-Plants: tr|K7K109|K7K109_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0235700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:69565518..69573687) extracted from Lotus japonicus Gifu genome v1.2.
GCGAAACACTAGCCATGCCCCTGTTTATGCTGCAGCTGGGCTAAACTGTGCTAACCAAATTCCCTCCCTCTTCTTCTTCT TCTTCTTCTTCTTTGAACATTCATTAATTAAGGCCGTGTTTGTTTATCCGTTTATTTACTTCATTCCATTGCAGCACAAT GCTCATTCACTGAAAAATGCGAGCACTGCACACATGACACCAATTTCTTGATGACCTCTTCAATCGTGTTATGCGAAAAC AACAACAACTTCATCTTCTTCAATCAGAATCTAATCTTGAACCCATTCATCTCACGCGGCGAACCACCGAGCTTCGTTCT CCGGCTCGGCGGCAAGGCGCGGCGCCGCTTCACCAGGTTCGTCTCCAAAGCGGAGCACTCCAGGAGGAAGAAAAACAGCA GCAGTTGGTGGAAGCGGTTTTTCTTCGAGGACGATGGGAATTGGCTAGGTCTGAAGGAAGATGACATGGTAGAGGCGGAG GAGGAGGACGAGGAGGAGGAGGTTTCCGGTGATGCGAAGTTCGAGGCGTGGAAGCAGCGAGCGGAGGCGATTGTGGAGGT GAGGGAGGCGAGGGAGGATAGGAGGAATGAAGAGAGTAGGAGGTGGGAGGATTGGCTGTTGGACGACGGTGGTAACGGTT CTTCTTCTTCGTGGAGTGAGGAATGGGAGCAGGGGATTAAGGATTATAGGGAGGAGAAGGTTCTGGAAGATGTTGCTGGA GAAAAGGGGCTGGTTCAGTCTGTTAGGAGTTATCTTTTTGGAAGGGAAGAAGATGATGATGACATGCTCTATGAAGACCG TGTTTTCCAGTATGCTTCGTCGAATTCGGTAAGTAACTGCATTTTGGTTTCTTGTCATGAAATTGATTGGATTAGGTTCT AGCTTTTCTTAGCTTATATAAGCATTTTGTTTCTATCTTAGGAGAAAGCCTTTATAGGTTTATAGATGCTTGGGGATTCT GAAGAAGTTGAGGTGTAGAAGCTGATTTTGTAAATTCATAGGTTATTGATAGCTAGATTGGTTTGGTCTTTCCTTTTTTG TAAGTGCTTGTTGAAAAGTTTATCCAAAATTTGCTTCTCACGGAAGATCGTCGTTTAGCTTATAGCTTTGCTTCTATGGC GTCTTCTTCTTCCCTCGTGTAAGAAGGGTGAAGAGGGAAGCAGGGATTTTTAGCTCAGCAGCTGCAAGTAGACTTGGAAT GTCATCATCGCGAAGACTGATTGCATAGACTTATGATAACATATCCTGTTACTTAGCATTATGCCCCTTTTGTGTGTGTG TGTGTGTACTGTGTTAGGAGGATAATTTTAAGTGCCACGATTGAAATATTTAATCATTATAGTGAACTTAATCATTTTCG CAGCATCTAGGATGTCGGAATTTCAGTTGGATTATTCAAACATCAGCCGGCCTTCAAATATTGTCATACTGAGTTAATGA TTTGCATGTCCTAGTGCTTGCTTAATATATTCTTTAATCAGTAACTCAATTCCATTTACCAAAATTGTTATTACAGGCTA AATTTTTGGCAGTGTTGATTATTATACCTTGGGCAATTGACTTTGTGGTTCATGACTATGTACTCATGCCTTTTTTAGAC AGGTAATGGTTGGAAATCAATTTTATTTCCTCCTTCTGAGTGCATGAACTTATTTTCTTTTGGCAGAATTTTGTTGTGCT ATGCTAATTGCTTGAAGGTAGGTGCACAAAAATATATAGCTATGTGTGTGCTTCTATCTGCACGTTGTTTGTAGAAGTGT GAGATATTTGGAGGACACGGAGGATGGCAAGTGAATAGGCTTGGTCATTATATGGTAGTCTAGGGGGCAAGACCAAAGTT TTAGTACATTGGATGGGGCAGATGAGTTCACTCTGAGATGTAATAGGTTGCCCAGTGAGTCAGTAACTATGCTTAGCATG AAAAGGACGATCATGTGTCACTGAATCAGATATCAAGTAGGAATCCATAACTCCATAAGCACAATCTGATAAAAGAGGCC ACAATATTAATAGCTAATTTCATAATAGTATAATACAGTGCCAAAAGATATAACACCAATAGAAATTAGTGGTTTGCCTG AATATATTTGTTCCTTTTAAATGATATGCAATTGAATGAAAAACCATGTTGGAATAACATAGTAGCACATGAGATAGTAT TGCTTCAACCATTATTTGTTCTTCAATGTATTAGTGATTTAGTCTTATTGATCAATTGTCTTGATAGCTTAAGCTAGATG GAGTGTCTGCACATTTAGTTTTACGTGCACATTTAGTCCTTTACGCACACAAGCTCACTTTCTCCTATGCTGAAATTTAA TTTAATTATGAAGGGAGGGCTAAGGATCAAACTCATGAGTCATGACCACTTGGTTGTTGCGGCTTTGATACCATTTTTAG TTATATAGGGCCATGCTGTTTAGCTTAAGAAATTTGAATTATTTATGTAAAGCAAAAGTTATTATGTGTTTCATAATAAA TATAAAAGGCTTTTTACGTTTTTACTTTCTTTATCATTGATTATGAAAGATTATTTTGAGTAGCCACTCGCTTCTAAGTA AAAGCTGAAAACAGACTATCTTTTGGGTAGATTTTGGTTTTTCTCAAAATCTTGTCAAAACAAAAGGAAAATTGTACTTG TTGTCATAATTATTTTCTTGAATAGGCATATGTAATAATATTTTATTATATAGGCATTACTATAATTAAGCATTAAAATT TCATTTAATTTTATATTATATACAGTTAGTTACTTTTGCATAAAAAAATACTACTAAAATTTTGAACTAATTTAATTGAT AACTTTTGTAATATGAAAATTTACCATACTTAAGAAAATTCTTATGTATGAGCTATTGTTGGCATCATTATCTTTCTTTT TTTGTGTGTACTAAATTGCTCTCGTAATTCTAATTTGGGTGTGGTGAAGGCTAAATGTATCTCCAAGAGTGTAGCTCCTA AGGATTGAACTCTCAACCTATGAGTTTAAACTTTAAACAACCACTTTTAACCACTGCGATTGGCATCCATTGGGAGATAT CATTATCTTTCTGAACCAAACTTATCATACTTATATAAAAAGTTAGAGTCTAAAAATGTTAATTTTAAATAATTATTTAA TTAATCTTGTGTCAAAAATTGAGATTGATTTACATTTAAAATCTTTAAATTATAAGATTTCATGGATAAGCTTACAATAT AGCACACGTTCCAAATAACTGTTAAAGTCATAATATATTATATACTATTATTCTATTATGCCGAATACAACATGCTAAAC AATCCCTGAAAAGGTGAGACAGTGGATAAGAAAAATATTTTCACTTTGAATATTGTGGTTTGGGTGATCTTATATGCAGC TGATTTTTTTATAAAGAGAGCTATGACCGTTAACATTTTTCTTTTTGCTTTATTTTCCTTGAAGTTCTTCAGATTGTTGA TCTTCTAGTCATGTGCTAGTTTGACTTCTTGGATTATTATTTTTTTATAACTGGACTACCAACTTTTTGCTATTGACAGA TATGTGAAGACAGTACCACTTGCAGCACAAATGCTCGATGTGAGGAGAGGTCAAAAACTTAGAATAGTTGATGAATTAAA GATTGAGAGAGGAAGATTTCAGCTAGAGGTAGAGATTGGTAAATCTCCACCTCTTTCTGATGATGAGCTTTGGTTGGAAT TAAGACATAAAGCGTAAGGCCAACCCTTCTTCTTTATGCCTGATCATCTTGAATAAATCTCCACCTCTTTCTTTTCCTCG CGGTAGATACTCTAGTTATAGTCAGAATATGAGCATTAAATGTTACTCTGCATTTAGTGAGGAAGTGCATAAAGACAATC ATGCTCTAGTGTGCACTACAAGTCTAAACTTCCTGTCCTTAAAAATATTCCCTCATTAAGTTCCATTAAATTTGCTTGTT AGTCTTCACCTGAATTCTGTGTTATAGAAGACCTTGTGAACTGGTGAAGAATTTTAGCTAAAGGACTATCAACATTATGT TGAACTTATTGGTTTGTTGTTATGCTATTTTTTAAGAGTCATCTGTGTAAGTTGACCTTTCTGACCTTCAATTGTTGTAT ACTTTTTATCCTTATTGGCCTTCAATTTGTTGCTACAACAGATTAGACTTGAGAGATGAGTGGAGACTAGAGAATCGCAG TGCATTTGCCAACATATGGTCAGACATGGTTTATGGGATCTCTTTATTTATTCTTTTATACTTCAATAAGAATAAGGTAA GTTTACCATTTTTCTTTCTGCTAAATGTTTTGATGCATTAGTAATTTTGTTAACTTGTTTTCTACCGTAAATATCAATGT TACTTATATGGCATATTACTATTAACTAAGTGAATAACTAGGATATGGTTCTCCTTTCTTTATTTGTTCAAGAAATTTTC TTTTCATATAACGGATCCAGAGCTTTCAGATATAGTGATGTTTCAGGAGATAAAACTAGAGAATACAGATGCTTTGTTGA TTACAAAAATTTACTTGGTTTGAGTTATCCTTTGTTTTTTTTTTTGTTCTTGTTGTGCAGGTAGCTTTGCTCAAATTTAC CGGTTATAAAATAATAAATAATATCTCAGATACTGGGAAGGCGTTTCTTGTCATACTTATCACAGATATATTCCTTGGGT AACTTCTTTTTGCAACTTAGTAATTGTTTTCTGTTCTGATAAACTTGGTTTCTCATGAGTTGTTGATGCTGCTTATGATA TCACTTATAGAGTTGTACCAAGTATCATTGTGTTAAAATGAAGTATCATAGCATTTGAAAAAGTACCAATACTTTCTTCA AGTGAGAAAAAAACATTTTTTTTATTTGTTTGGAAAAAAATGTGTTAATGCCTTAATGGTTAGTTTTGTACTTACTTAGT GATTGTCACAGTTCCTATCTAATGAAAGGTAGATTGTATTATTGTTAAAAATAGAAGGAAAGTACAGAAAATTAAGAGGA GATATTCTCAGCCATGCTAAACTCCTATTGCCCCAAGCTATAAGCTGAAAGTGACATGGACAATACACGATCTCTTCTTC CTCTGAACTTCCCTATATAAACAGCTAACTTTTCCTTCCATTTGTTGAATACTTATACTCCTCTCCTAAAGCGGGTATTG GCCCAGGTAAGCATATCAAGATATACCTGGATTAGAATATAGAAAGAAGACTGTCTATTGACCAGAAATTTCTGGTACAC CCCATGTACTCTCTAATTTTCTCTCCGAAACCAAGGATAAGCCTCTTCTTCCTCTTATTTATAGCTTATTATCTCTCACT CTCTTACTTACTCTCTAACCTATCAACTATCCCAATTTACTAAAGGGGTCACCTAAAATATCATTAAGGCCTTATCAAGC CCCTTCTTATTAAAAACAGGTCCAGGAACCTATGAATTTCATCCACTAGAAAAGCTGTCTTCTCCTCAAGGTAGAACTGT AGAAAAACAAAACTGGTTGTGTAATTTTCTTCTTCCATAGTTGCTGCCTTGACAGTCTTGGACTTCCACATGATAAGCCT TTTACTCATTTAGCAATAAGCTTCCCATACTTGTTGGTTTATCATTTAGTGAGGATAACTTCAACGGAAATTAGGTAGAG TGACCATCAGTTCCAGTGCCTAGAGGTAGGTCGGCTTTCATTTACTGAACACAGGAAGTCCTGGAAGACTAGGTGCATGA GGTTTGTAGTTTGCTGCAAGCATGCAACCTCCAGTAGGCCATTTGCCTCACAGACTGGAGTTTACTTTCCCAGGAATAAT TCTAAATGCCTTGAAACAGTGCACTCTTTGTGTCTGTCTGGCATCCCTCGTCAAATGAAAGAACAAAACACAACCTTATC ACTACCTTGCCGGAAATTTGTTATTATTGAGAATGGGAGTGATGAGAATCAAAATTCAAGCCGCACAATAAAGCTCTAAT GCAATGTCAAAGAATTATCCTAAATAAATTTATAAGGTTATTTTCTTATTGAAGGTACTCAAGCATTGATTTTACTTAGA ACTGAACTTACACTTCATATGGTTAATAGTGTTGAGATATATTATTATTGTTCAGTTATGATAGATTAGGATCATATTTT ATTTAGATTGCGTTGTTTTAGTTGACTAGGAAACCTTGTCCATAAATATTGTAGTTATGAATCGTGTAAAATACACATCA ATTATTCAAATAATACCAATTTCAAGTAATAGTAATGAATTTCATATGCGGTAATTATTATAGTTTTCTTCTCTTTTGTG TATTAACACCCTTTTATAGAATATAATATTCTATTTACCTTGCAAGATTTCCTACCAATTTCAAGTAATAGTAATGAATT TCATATGCGGTAATTATTATAGTTTTCTTCTCTTTCGTGTATTAACACCCTTTTATAGAATATAATATTCTATTTACTTT GCAAGATTTCCTATATGGTTTAATTAGCCTATTTTGTTTGACCTTTTTTGGTTGCATATGTTGCTAATTGCTTTTGTTGC ATACTGGTATGCTTTCAGGTATCATTCTGAATCTGGTTGGCAAACGTTGCTAGAGGTAATTGTTGAGCACTATGGACTCG AAATTGATCAGTCTGCTATAGTTATTTTTGTCTGCTTGATCCCAGTTGTCATCGACGCATGCGTGAAACTTTGGGTAAGT TCTATTTATTGATTACTAACCGTTATTTATTTTATGTCCTTTTATATTTAATGTATTGGCTGGTGTTAGCAATTGAAAAT CACTTTCTAGCCTCTTCTTGACAACTTAAGTTTTCACACACACATTCACCACCATTGACCAGCACCCTTGCCATTGTTTT CATGCAATCTTTAGTGTATTGCAAATCCACAAGCAATAACCCTTGTTAGTAACACTTTTCGCTAATATCAACAGCCAGTC ATTTATCGCATAAGAGCACCACTTGCAATTCACTGGTTCATCATGAGATCTTTGGAGTCGGAGTTCCCTTGTGAGGCACT CCCTTTGTCGATCATGTGTCATGATTCATGGATGGTGCCAACTAACCATGTTTTCCACATGCATCAAGTTTATAGTGTCT AGTGTCCACCCTGACCCATGATCACCATAATACCCACTTTAAGGACCTGGTTCAAATAACAGTCCAGAATAACACGGTCC TTAACCTTGTGAGTGGAGAGGCTGTTTTCGAAATAAAAAATAAGCTATTAATATTTGCCTTGTTTCCATTGCTTTGTAGT AGTTGGTAATGGGTATGACCCTTATTGTTTTTGTGATGCAGTTGTTCAAATTCCTCCCACAATTATCCCCGAAAGTGGCG AATATATTTCAGGAAATGAAACGTCACTAGTTGAGAATTTATTTCCGGGCAAGTGGTTCTTCTTCTTCGGCTGTGTGCAC TGGCTGTCTACTGAAACATTTTCAGTATCTCACCCATTCTTGTATGCATTCTTTATAGTGCAGTGCCCAACATTTTGTGT AATAATTACTGTTCAATGAGTTCAGCTGCCAGTCCATGCTTCTCACTTTTGCTAACAATGGTGAGAAGTATGTATTTTTT GGAGGGGAAAATACCACGAGGCTAATTGACTTTTCTCCTCTGGGCAAATCATCACCCAAATCCACCGATGAATGGATAAA TATAAGGCTTATATATGTTAATCAGATTGAAGTTCAACTCATGTGGAGTAAGGTACTTGCAATTTTATTTTATTTTTGAA TTGGATAGAGTTGAAGGATCAGGATCCTCTCCCTCTACTGCACCATGCTGTGAATTAAAAAGAGGGACGTCCAACGACAC TTACATCAAACATGGATTGCAAATCCTGGTCTTAGAAGTGATACTTGAAAGCTACAATATAAATCATTACAAAACGAAGC TTCTTCATTCAAGATGCATAGAGCTAAAGTGATTTTGCAAAGCTACATAAATCTACTAAAATAACTAGAAACAACTGGCA AAGTGGCTATCCTCATCGTTGGATCCAAGCCACTGACTACTAAGTGAAATTTATTTTTTCTACTTCTTTAAACACTGCTT CTTTTGCTTTGCAAGTGTTGCAATCTTGTGTGGCTTCATGCATCAGAGGATGCGTTTTTGCCACCATAAACGAGTACGAA TGAAAGAAACCTGATCATAGTAATAAAATGACGTCATGTTATTTCAGTAAACTTTTTACTTAATATATATTCATCAAATT TAATATAGAA
CDS sequence (LotjaGi2g1v0235700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCTCTTCAATCGTGTTATGCGAAAACAACAACAACTTCATCTTCTTCAATCAGAATCTAATCTTGAACCCATTCAT CTCACGCGGCGAACCACCGAGCTTCGTTCTCCGGCTCGGCGGCAAGGCGCGGCGCCGCTTCACCAGGTTCGTCTCCAAAG CGGAGCACTCCAGGAGGAAGAAAAACAGCAGCAGTTGGTGGAAGCGGTTTTTCTTCGAGGACGATGGGAATTGGCTAGGT CTGAAGGAAGATGACATGGTAGAGGCGGAGGAGGAGGACGAGGAGGAGGAGGTTTCCGGTGATGCGAAGTTCGAGGCGTG GAAGCAGCGAGCGGAGGCGATTGTGGAGGTGAGGGAGGCGAGGGAGGATAGGAGGAATGAAGAGAGTAGGAGGTGGGAGG ATTGGCTGTTGGACGACGGTGGTAACGGTTCTTCTTCTTCGTGGAGTGAGGAATGGGAGCAGGGGATTAAGGATTATAGG GAGGAGAAGGTTCTGGAAGATGTTGCTGGAGAAAAGGGGCTGGTTCAGTCTGTTAGGAGTTATCTTTTTGGAAGGGAAGA AGATGATGATGACATGCTCTATGAAGACCGTGTTTTCCAGTATGCTTCGTCGAATTCGGCTAAATTTTTGGCAGTGTTGA TTATTATACCTTGGGCAATTGACTTTGTGGTTCATGACTATGTACTCATGCCTTTTTTAGACAGATATGTGAAGACAGTA CCACTTGCAGCACAAATGCTCGATGTGAGGAGAGGTCAAAAACTTAGAATAGTTGATGAATTAAAGATTGAGAGAGGAAG ATTTCAGCTAGAGGTAGAGATTGGTAAATCTCCACCTCTTTCTGATGATGAGCTTTGGTTGGAATTAAGACATAAAGCAT TAGACTTGAGAGATGAGTGGAGACTAGAGAATCGCAGTGCATTTGCCAACATATGGTCAGACATGGTTTATGGGATCTCT TTATTTATTCTTTTATACTTCAATAAGAATAAGGTAGCTTTGCTCAAATTTACCGGTTATAAAATAATAAATAATATCTC AGATACTGGGAAGGCGTTTCTTGTCATACTTATCACAGATATATTCCTTGGGTATCATTCTGAATCTGGTTGGCAAACGT TGCTAGAGGTAATTGTTGAGCACTATGGACTCGAAATTGATCAGTCTGCTATAGTTATTTTTGTCTGCTTGATCCCAGTT GTCATCGACGCATGCGTGAAACTTTGGTTGTTCAAATTCCTCCCACAATTATCCCCGAAAGTGGCGAATATATTTCAGGA AATGAAACGTCACTAG
Protein sequence (LotjaGi2g1v0235700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSSIVLCENNNNFIFFNQNLILNPFISRGEPPSFVLRLGGKARRRFTRFVSKAEHSRRKKNSSSWWKRFFFEDDGNWLG LKEDDMVEAEEEDEEEEVSGDAKFEAWKQRAEAIVEVREAREDRRNEESRRWEDWLLDDGGNGSSSSWSEEWEQGIKDYR EEKVLEDVAGEKGLVQSVRSYLFGREEDDDDMLYEDRVFQYASSNSAKFLAVLIIIPWAIDFVVHDYVLMPFLDRYVKTV PLAAQMLDVRRGQKLRIVDELKIERGRFQLEVEIGKSPPLSDDELWLELRHKALDLRDEWRLENRSAFANIWSDMVYGIS LFILLYFNKNKVALLKFTGYKIINNISDTGKAFLVILITDIFLGYHSESGWQTLLEVIVEHYGLEIDQSAIVIFVCLIPV VIDACVKLWLFKFLPQLSPKVANIFQEMKRH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 431 | 431 | 1.2E-196 | ||
| Phobius | 1 | 208 | 208 | - | – | |
| PANTHER | 1 | 431 | 431 | 1.2E-196 | – | |
| Coils | 110 | 130 | 21 | - | – | |
| Pfam | 201 | 429 | 229 | 3.5E-74 | ||
| Phobius | 209 | 229 | 21 | - | – | |
| Phobius | 230 | 306 | 77 | - | – | |
| TMHMM | 306 | 328 | 23 | - | – | |
| Phobius | 307 | 327 | 21 | - | – | |
| Phobius | 328 | 389 | 62 | - | – | |
| TMHMM | 352 | 374 | 23 | - | – | |
| TMHMM | 389 | 411 | 23 | - | – | |
| Phobius | 390 | 410 | 21 | - | – | |
| Phobius | 411 | 431 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0235700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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