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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0237600 |
| Transcript ID | LotjaGi2g1v0237600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serpin-like protein; TAIR: AT1G47710.2 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0237600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:69843798..69845984) extracted from Lotus japonicus Gifu genome v1.2.
ATCTGAAGTGACATAGAAATAGAAGAGAAAGAATGAACAATATGATAAAGGGTGATGTAAAAGGAAAAGAAAAGAGAGGT AAAAAGAGAAAGTACAAGGAAGAAAAAGATAGAAAGATAAAATTCGAGGAGTCCGAACCTAATAAAAAACTGAGTGTGAA TGAATCAAAACCCTTCCGACAACAACAAACCGGCCAAACGGACGTTGCTCTTACCATAGCGAAACGTTTGTTCTTGAAAA AATCTAATAAAGACAAGAACATTGTGTTTTCGCCGTTGTCGCTTCACGTTCTGCTCAGCATAATCGCCGCTGGTTCCGAT GGCTCCACACTCGATCAGCTTCTCTCGTTCCTCCGTTCCAGTTCCCTGGAGCATCTCAACTCCTCCGCCTCTCAACTCAT CTCCGTCGCGCGCTCTGATGCTTCTTCTGTCGGCGGCCCTGAACTCCGTTTTGCTAGTGGTGTGTGGGTTGAACAATCCC TTGCTATTCATCATTCCTTCAAACGACTTGTGGCTACTGATTATGATGCTTCTTTGACCTCTGTTGATTTTCTTACTAAG GTCAGTGATAATTTGATTTTCCCTGCCTCCCCGATTTTGAGATTTCATAACCCTAATTTATTGTATGCCTTTGAAATTTC TGATTGATCTGTTTCTGTTTTAATTTGAGATTTCATAGCCTTAATTAATTTATGGAAATAAAGAGAAATCTACTCACTTG CCACCAGAATGATTCTAGGGTTAGTAGTATGTTAGTGAAAACAATTGCTTGCTGCCTTGGCAACCATGCCAACTAATTTA TCTGTTTTTAATTCTAAGGTTAGCAAAAGTGACTCTGTATTTTATTTTGGTATACAACCCATTTTTATTTGTTATGTATT TTATCTAATTGATGATTCAGTGATGGTTGTGAAAATAAGATTGGTTAAAATATAAAAAATCTTGGGATGAAGTGCTTGTA TGAAAATTAAGAACCATATAAAGTTATTATATTCTGGTGATTGATTTAAAATTTGATGGTGGTTTTAAAGGCGGGTAAAG TGGTGGACGAAGTTAATTTATGGGTTCAGAAAGAGACAGATGGCCTTGTCAAAGACCTTGTTAATCCTAGGTCAGTTAAC AGCTCAACCAGACTCATTTTTGCAAATGCATTGTACTTTAAAGGTAAATGGTTTGAGAAGTTTGATGCTTCAATGACAAG AAACTATGATTTTCACCTTCTTAATGGCACCTCAGTCAAGGTTCCCTTCATGGTCAGCAAGAAGAAGCAATTCATTAGTA CTTTTAATGGTTTCAAAGTCCTTGGTTTGCCTTATAAGCAGGGTGAAGATAAGCGTCGGTTTTTCATGTACATTTTTCTT CCAAATGCAAAAGATGGGTTGTCTGCTTTGGTTGCGCAGTTGACTTCAAATGCTAGGTTCTTCGAATCCAAGCTTCCTCG TCAAAAAGTGGAAGTAGGTGACTTCAGGATTCCCAAATTCAAAATTTCTTTCGGGTTTGAAGCTTCTGTTGTTCTAAAGG AGCTGGGAGTGGTTTTACCTTTCTCATCCAAATCAAATTTGAGAAAAATGGTGGATTCTGACCTATATGTTTCCAACATA TTTCACAAGTCTTTCATTGAAGTAAATGAAGAAGGCACTAGAGCTGCAGCAGCAAGTGCGGGTATAGTATTAAAGAGGAG TCTGTCGCCAAGGCCGACTCGGGTTGACTTCGTAGCTGACCACCCTTTCTTTTTCGTGATCAGAGAAGAGATGACTGGAA CAATACTATTTACAGGGCAGGTGCTCAATCCACTTGTTAGGTGATGAAAACATCATTAGTGAAACTTAAGCCCTTATTCT GTTATCTTTATTTTTCTTATGGTCCTGTTAGTGAAACTTCCCTTATTCTGCTATCTTTGTTTTTCTTATGGTCCTGTTAT TAGAAATGGTTTGACGTGAGACACATGGATCAGCTTTACAATTTTCATTGCTAACCGTTTTTAATATTTTGAAATGCACT CTTTTTTATGAATGTTGTTGCTTTATGTGTTGGCTTTTGCAACTTATCTGTCCTTGAGTTGAATGTTACCCTGGGTTTGA TACCTGTTAACTGTCACCCCTTGCAAGTGGTGTTAGCAAGTAATAAAGTGGATTTAACTTTTCTTCCGAAGTAAAATAAA ACTACTGAACTGGTATTAAACACAAAG
CDS sequence (LotjaGi2g1v0237600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAATATGATAAAGGGTGATGTAAAAGGAAAAGAAAAGAGAGGTAAAAAGAGAAAGTACAAGGAAGAAAAAGATAG AAAGATAAAATTCGAGGAGTCCGAACCTAATAAAAAACTGAGTGTGAATGAATCAAAACCCTTCCGACAACAACAAACCG GCCAAACGGACGTTGCTCTTACCATAGCGAAACGTTTGTTCTTGAAAAAATCTAATAAAGACAAGAACATTGTGTTTTCG CCGTTGTCGCTTCACGTTCTGCTCAGCATAATCGCCGCTGGTTCCGATGGCTCCACACTCGATCAGCTTCTCTCGTTCCT CCGTTCCAGTTCCCTGGAGCATCTCAACTCCTCCGCCTCTCAACTCATCTCCGTCGCGCGCTCTGATGCTTCTTCTGTCG GCGGCCCTGAACTCCGTTTTGCTAGTGGTGTGTGGGTTGAACAATCCCTTGCTATTCATCATTCCTTCAAACGACTTGTG GCTACTGATTATGATGCTTCTTTGACCTCTGTTGATTTTCTTACTAAGGCGGGTAAAGTGGTGGACGAAGTTAATTTATG GGTTCAGAAAGAGACAGATGGCCTTGTCAAAGACCTTGTTAATCCTAGGTCAGTTAACAGCTCAACCAGACTCATTTTTG CAAATGCATTGTACTTTAAAGGTAAATGGTTTGAGAAGTTTGATGCTTCAATGACAAGAAACTATGATTTTCACCTTCTT AATGGCACCTCAGTCAAGGTTCCCTTCATGGTCAGCAAGAAGAAGCAATTCATTAGTACTTTTAATGGTTTCAAAGTCCT TGGTTTGCCTTATAAGCAGGGTGAAGATAAGCGTCGGTTTTTCATGTACATTTTTCTTCCAAATGCAAAAGATGGGTTGT CTGCTTTGGTTGCGCAGTTGACTTCAAATGCTAGGTTCTTCGAATCCAAGCTTCCTCGTCAAAAAGTGGAAGTAGGTGAC TTCAGGATTCCCAAATTCAAAATTTCTTTCGGGTTTGAAGCTTCTGTTGTTCTAAAGGAGCTGGGAGTGGTTTTACCTTT CTCATCCAAATCAAATTTGAGAAAAATGGTGGATTCTGACCTATATGTTTCCAACATATTTCACAAGTCTTTCATTGAAG TAAATGAAGAAGGCACTAGAGCTGCAGCAGCAAGTGCGGGTATAGTATTAAAGAGGAGTCTGTCGCCAAGGCCGACTCGG GTTGACTTCGTAGCTGACCACCCTTTCTTTTTCGTGATCAGAGAAGAGATGACTGGAACAATACTATTTACAGGGCAGGT GCTCAATCCACTTGTTAGGTGA
Protein sequence (LotjaGi2g1v0237600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNNMIKGDVKGKEKRGKKRKYKEEKDRKIKFEESEPNKKLSVNESKPFRQQQTGQTDVALTIAKRLFLKKSNKDKNIVFS PLSLHVLLSIIAAGSDGSTLDQLLSFLRSSSLEHLNSSASQLISVARSDASSVGGPELRFASGVWVEQSLAIHHSFKRLV ATDYDASLTSVDFLTKAGKVVDEVNLWVQKETDGLVKDLVNPRSVNSSTRLIFANALYFKGKWFEKFDASMTRNYDFHLL NGTSVKVPFMVSKKKQFISTFNGFKVLGLPYKQGEDKRRFFMYIFLPNAKDGLSALVAQLTSNARFFESKLPRQKVEVGD FRIPKFKISFGFEASVVLKELGVVLPFSSKSNLRKMVDSDLYVSNIFHKSFIEVNEEGTRAAAASAGIVLKRSLSPRPTR VDFVADHPFFFVIREEMTGTILFTGQVLNPLVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 50 | 50 | - | – | |
| MobiDBLite | 25 | 42 | 18 | - | – | |
| SUPERFAMILY | 43 | 430 | 388 | 2.49E-106 | ||
| PANTHER | 53 | 431 | 379 | 4.1E-140 | – | |
| PANTHER | 53 | 431 | 379 | 4.1E-140 | ||
| Pfam | 55 | 430 | 376 | 3.3E-102 | ||
| SMART | 64 | 430 | 367 | 8.0E-94 | ||
| Gene3D | 74 | 376 | 303 | 2.8E-117 | ||
| Gene3D | 223 | 425 | 203 | 2.8E-117 | ||
| ProSitePatterns | 403 | 413 | 11 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi2g1v0237600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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