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LotjaGi2g1v0241000.1

Overview

Field Value
Gene ID LotjaGi2g1v0241000
Transcript ID LotjaGi2g1v0241000.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Altered inheritance of mitochondria protein 32; TAIR: AT3G27570.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|Q6BPT6|AIM32_DEBHA Altered inheritance of mitochondria protein 32; TrEMBL-Plants: tr|A0A0S3T7F2|A0A0S3T7F2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0241000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:70293965..70298919) extracted from Lotus japonicus Gifu genome v1.2.

TGGAAGAGCTTATTTGAGCTTATCTAATAATATAAGCTCTGGGAGAGCTTATGCACACACCTTATGATCCAGCTTATGAC CGTTTTGAACTTATTTTCATAAGCTGCTCAGGATATTTTATGCTTACATATAACTTATTTTCAATTTATTTTAATATTTT TTTTAAAATAGCTTATTAATAAGCGCTTATGCCATAACCACTTATGATCATAAACACTTAATTAAGCTGTTTTCTCATAT GAGACATAAGTTTAATGAAAATCTAAACAAGTACATACTCACATTTTAAAAATCACTTCTCCCCCTCACAAATTAACAGA AATAGCCTTCTTCTCCTTGAATTACAAACGTGTTAGATGTGAGCTATTAGCTAATTGACTTTGTGAAATCCTGCAGTCTC TGACTGTTAGGTTGAAGAGGTAAGTAAGAATGGCATTACCATTTTCACGCCTCATCAGAACCTCCCTTTCTCATTCCGAT CACAACCCTCTCATTCTCATTCCCGCCGCCGCCACCATGACTTCCGACGCAAATCACGGCTTCTCCCGCCCCGAGATGTA CAAGGACAACCTCGCCGGCACCGTAGACGCCTACCACCGCCACGTGTTCCTCTGCTACAAAAACCACCACGCTTGGCCCG CACGCGTGGAGGCCGATTCTCTACCCAAGCGCGTCGCCGACGCCTGGAAAGCTCGCAAGAATCTCATCGCCGTCAAGGTA ACTAACTAATTGCCGTTTTGAGTTTCTGAATTGAATTGGATTCGCGTTTTGGAATTTGGTTGTTGTTGTTGGCAGCAGAC GAAAATCACGGTGTGTGAGGCGCGTGAGGAGGATGATTTTTCTCAAGGAGATGTCTTGATTTTCCCGGATATGATCAAAT ACAGGTAGGTAACACACATTATTTTGTTTAGATAGAATTATATATGTCTGACCTTTGTCTCACTGATCAAATTAAGTGCG TGAAAACCCAAAGAATTTCCAATTAAGTTTGAATAAATCATACTTTTATATAAGATTCCTACTATTTTTACAAAAATATT ATTTTTTTCATATATTTCTCTATGTGATTAATTTCTATGCACTGTTGGTGTAAAATATTATACATAATCATTCAATCACA TTATTTAATTTTCTATTTTAAATATCATTAAGTTTAAAATTAATTATGAACTAGTAAAATGAAGTGATGTGATTGTATAA ATGTAAGTGCATAGAAATTAATCTCCTCTAATATATTTCGGTAGTGAATGAAACGAAATGCATTATAACTTTTATTTTAT TATAGTGCTACCTTTATTTTAATCATTTTGAATGATCCATAAAAAAATCATTTTGAATGACATTTTATGAATGTGAAGTA ATAAAGATCAAAGCGAAATTTTATAATTCTATTGGGCTTAGCTTTGTCCGAGCCAGTTGGCCCAAGGGTCCTTTTTATTG GTTTCTTTTATTTGCTAGCTTGTACCAAAAACAGTTTCATACCTCAAATTGGGGAAGAAAATGGTCGAATATAGTGGAAC GGAATTGAAATAGTTATGTTTATTCCATTTTCTTACCAATCCAAGCAAAATTTATATTATAATTCCATTACATTTCTCTT TATTCCATCTAATTTCATTCCAAATATACTTTAGTATTTAAAAAATTTAAGAGACAGTTTAGTTAGTTTCTTAATAAGCA TTTATACATCGAAAATGAAAATTTTCGCTTCTACACCTTCTTGGCTTCTTTTGTCATGTTTCCCTATCTAATCTAACTTG TTTACGAGCAGGTATAGATTTACAAGCACTTTTCCCTAAATTTGAAGCTAATCCAAACTATTAGGCCTAAGTCACTTGTG TTTGTTTCTTCTAATTTCCATTTTTTGAATGTAAAAGGTGCATGTTTGGAAACTCTTATGTAAAAAAAGTTGAAGTCAAA ATGATAGTGGATATGAGCAATTTTTTGTTGTTGCTTTTGCCTCTATTCACGATTAATTTGTTTTCAAATGAGTTTCCAAA GATGCACTAAAAAGACCGATAGCAAAGCGTTTTTATGTTGAAATGAAGTTTGTGTATTGAGAAGTATGTGTTCATTATTT GTCTTTGCTTGATTGAAAGGGGTTTGGAGGAATCGAATGTTGATAGCTTTTTCGATGACGTTATGGTGAGCGGTAAATTG TGGAGTGGCGGAGCACAAAATGTGTTTGCGGGTTCGCATATCTTCGTGTGTGCTCATGGAAGTCGCGACGTGAGGTGCGG TGTTTGTGGACCGATTCTCATAGAGAAACTCCACGAGGAAGTTCAGCTCCGCGGATTGAAGGATCAGATATCTGTTATGG CGTGTTCTCATGTTGGTGGTCATAAGTATGCTGGCAATGTAATCATATTCAGCCCAGGACAAGATGGAAAATTTATGGGT CACTGGTTTGTCACCTCTCTCACTTGTATTACATTGTGATTATAACACACTCTTGTTTTGATGGAACATAGTGCATGTTT GGAAAATTCTTCTATGATTGATTCTTAAGTCAAAATCAATTCTGCACTGGGTGTCAGAATTGATTCCGAGAAAAAAAAAA AGATGATCCAAACATGCTGATAGTGTTGTTGGTTTAATTGTAGTGCCTTATAAATAATTAATTGCAGGTATGGCTATGTT ACTCCTAGTGATGTGCCTGCCTTGTTGGACCAACATATTGCCAAGGGAGAGATCATACAAAAACTTTGGAGGTTGCTACT TCTTTTCATGTACATCTGCATTTCCTATCCTTTTTAATGAAGTGTTAATTTGAAGGATAAATTGTTTGTAAATTAAGACA AGAGAAAAACAATTATAATGTGTCTTTTAGATTCTCAAGCTAATCTTCCATTAGTTATTAAATTGAATTATGTTAAATTG TTTTCAGGGGCCAAATGGAGCCACCTGTTGCTGAAGTTAAGGGAGCAGATGACCAGAAGCTTGCTAACGGGGATATTACT CGCAAGGCCAAGAAGAATGATGAAGAAAGTAAAGATGAAAATGTGGCTGGTTGTTGCCAGGGGCTTAGTGGGGTTTCTTG CTGCAGAAGTGGAAGTTCTGAGTATAACAAAGGGACAGATTAAGCACAAGAAAACCAGGGGAGTTAAATAAGTTGGAGTT GGCCTGTATAAGCTTCTATTCATTGGAAGTGGAGAAATATGAAGTCTTCCAATAGATATAGTGAGGAAAATTACATTTTT TATTTTAAAAAGTTTCAATACAATTATGACTATTGTATTTGTTTCTTTACGTTATTGGCTTCCAGGTTTTAGAGTAAATT CAAAGTTTACTGTGATAATTGAACTTAAAGCTGATTGTGCCTTTCAGTAACATTCCTTTCCTTTTTTGCGGAAGGGGCGT TCCATGTCTTCGATTCTCTACTCGAGCATGTTCAAGGCTTAGTTTGTTGTTTGAGCCAGGATTTCTAGGGAGCTTCCTGG TGTTGATGCAGCGGCGTGGGAGAGGTGATTTGTACACCATGTTCCTCTTGTTGTGGCGGGAGAGAGTTGTTTTCTACGCA TGTTGGATAAGTCCATTTGACAGTCGATCAAGGGCAAGGAAACTAGGATTGTTGGAGTCAGTACCTTTGAAGGAAATACC TCTTTGAAGGTCTATCTTAAAGAGTGAAGACAATGATGCTCTGGTGCCTGAAAGAATGATCAAGCCCAAAGCCGAAGTTG AGAAGGGTTAATGGTTCTTCAACAAGTATGTTAAAGACCCACAACCCGAGCCTAAGACTCTATCAAGGTCTCAGAAGAGG TGAAGATAAAAGAATAGAGCCATCCAGAAAATGAAACAAATGATAAGCATGCTTGGCTCAGTAAAGATCATTGAAAGGGA AGAGGTGGTATCCCCAAGAATACCTTGAAGGAAACGACTTAGATGGCTGCTCTAGTTCATAAAGAGGAATCATTGGCAAA GTCTCTTGAACAGAGTATTAACCAGTCGATCCCAAGAGTGCAAACACTCAAACTTCAGGAGAAGAAGAGGAAGGACTCAA CCTCGAATTTTCCATAGCCGATGAAGAGTTGAAAACCTTGTTAAAGGATGACAACTTATTGGATGTTGCGGCTGCGGGTG CGAGTTCCCTTATGAGTTTGTTCCAGTGCAAGGTTGAGATGGAACCTTAGAAGGTGACTTGCTCGTAGATGAAATGGAGT GGGCGTCACTTGTAAAACCACCACTAAGGTAGCCCTGCCATTCGAGGAAACCCACAAAGGACATGACAAAGCACCTCAAG CCTATCTATGTCACAACTCATATCAACGACAAGTCTATGTCTAGGGTTTTGCCGATCTAGGGGCTATGCTCAACGTTATA CCATTATCCACTTTGAGGAAGTTGGGAAAATCCTCAAAGGATCTATTTGAAACCAACTTGAAGATGTCTGATTTCACAGG AGGATCAACAAAGGATGTCAAGGTACTAATTGCCGACATCATGTTAAGTCTCAAGGCTAGCCAATCTGCTTTCTTTGTGG TAGATGGTAAGCTCAACCGCAATGTTTTGTTTGGATCCACCCAAACTTGTGTGTGCCCTCCACTTTTCCCCAATTTTTGA TCTTCTGGGTGAGAGGCATTGTTGGGAATTGACTCATTAGTAAAATCTTGGGGCCACAGATTTTATTTTGAGGCCAAAAT TTCAGTTTATTAGGATTTGATTTAATAGGGAACACAATCCCGGAAATCAAGATTCAAGAGCTGAGCAGTTGATCTTCATG AGGGTTCGAGAATTCGCCAAGGTGGAGATTGTTGGGATTGACTCATTATCTTATCAGTTATTTGTATTTGATTTAAGAGG ATTGTGATATGAATTTAGAGAGACTCTATCTTATCTGATGGGTTTAGATAAGACTTTATCTTATCTTATGGGTTTAGATA AGATTCTATCTTATTGGTTTAGATTATCTTATCTTGTAATACTAGAGTTAGTAGTGTCCTATAAATAGATAAGGT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0241000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCATTACCATTTTCACGCCTCATCAGAACCTCCCTTTCTCATTCCGATCACAACCCTCTCATTCTCATTCCCGCCGC CGCCACCATGACTTCCGACGCAAATCACGGCTTCTCCCGCCCCGAGATGTACAAGGACAACCTCGCCGGCACCGTAGACG CCTACCACCGCCACGTGTTCCTCTGCTACAAAAACCACCACGCTTGGCCCGCACGCGTGGAGGCCGATTCTCTACCCAAG CGCGTCGCCGACGCCTGGAAAGCTCGCAAGAATCTCATCGCCGTCAAGACGAAAATCACGGTGTGTGAGGCGCGTGAGGA GGATGATTTTTCTCAAGGAGATGTCTTGATTTTCCCGGATATGATCAAATACAGGGGTTTGGAGGAATCGAATGTTGATA GCTTTTTCGATGACGTTATGGTGAGCGGTAAATTGTGGAGTGGCGGAGCACAAAATGTGTTTGCGGGTTCGCATATCTTC GTGTGTGCTCATGGAAGTCGCGACGTGAGGTGCGGTGTTTGTGGACCGATTCTCATAGAGAAACTCCACGAGGAAGTTCA GCTCCGCGGATTGAAGGATCAGATATCTGTTATGGCGTGTTCTCATGTTGGTGGTCATAAGTATGCTGGCAATGTAATCA TATTCAGCCCAGGACAAGATGGAAAATTTATGGGTCACTGGTATGGCTATGTTACTCCTAGTGATGTGCCTGCCTTGTTG GACCAACATATTGCCAAGGGAGAGATCATACAAAAACTTTGGAGGGGCCAAATGGAGCCACCTGTTGCTGAAGTTAAGGG AGCAGATGACCAGAAGCTTGCTAACGGGGATATTACTCGCAAGGCCAAGAAGAATGATGAAGAAAGTAAAGATGAAAATG TGGCTGGTTGTTGCCAGGGGCTTAGTGGGGTTTCTTGCTGCAGAAGTGGAAGTTCTGAGTATAACAAAGGGACAGATTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0241000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALPFSRLIRTSLSHSDHNPLILIPAAATMTSDANHGFSRPEMYKDNLAGTVDAYHRHVFLCYKNHHAWPARVEADSLPK RVADAWKARKNLIAVKTKITVCEAREEDDFSQGDVLIFPDMIKYRGLEESNVDSFFDDVMVSGKLWSGGAQNVFAGSHIF VCAHGSRDVRCGVCGPILIEKLHEEVQLRGLKDQISVMACSHVGGHKYAGNVIIFSPGQDGKFMGHWYGYVTPSDVPALL DQHIAKGEIIQKLWRGQMEPPVAEVKGADDQKLANGDITRKAKKNDEESKDENVAGCCQGLSGVSCCRSGSSEYNKGTD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31902
32 309 278 9.0E-117
IPR009737
PANTHER
PTHR31902:SF12
32 309 278 9.0E-117 –
Pfam
PF06999
48 256 209 7.5E-46
IPR009737
CDD
cd03062
156 258 103 8.00696E-42
IPR009737
Gene3D
G3DSA:3.40.30.10
156 263 108 5.6E-23
IPR036249
SUPERFAMILY
SSF52833
158 261 104 2.24E-21
IPR036249
MobiDBLite
mobidb-lite
269 294 26 - –
MobiDBLite
mobidb-lite
270 293 24 - –
MobiDBLite
mobidb-lite
300 319 20 - –
MobiDBLite
mobidb-lite
304 319 16 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0241000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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