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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR009737
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.496s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0265159.1
n.a. Sucrase-like protein [Medicago truncatula] gi|357495113|ref|XP_003617845.1| chr0 137372810 137374018 -
2 domain predictions
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Lj2g3v3315580.1
n.a. Sucrase-like protein [Medicago truncatula] gi|357495113|ref|XP_003617845.1| chr2 41833536 41836349 -
3 domain predictions
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LotjaGi1g1v0015500.1
n.a. Altered inheritance of mitochondria 32; TAIR: AT4G26620.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|Q6BPT6|AIM32_DEBHA Altered inheritance of mitochondria protein 32; TrEMBL-Plants: tr|G7KEI3|G7KEI3_MEDTR Sucrase/ferredoxin family protein; Found in the gene: LotjaGi1g1v0015500 LjG1.1_chr1 1988853 1992434 +
4 domain predictions
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LotjaGi1g1v0019800.1
n.a. Altered inheritance of mitochondria protein 32; TAIR: AT4G26620.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|P08197|CYC6_CHLRE Cytochrome c6, chloroplastic; TrEMBL-Plants: tr|I1M6F2|I1M6F2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0019800 LjG1.1_chr1 2466859 2470123 +
2 domain predictions
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LotjaGi1g1v0019800.2
n.a. Altered inheritance of mitochondria protein 32; TAIR: AT4G26620.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|P08197|CYC6_CHLRE Cytochrome c6, chloroplastic; TrEMBL-Plants: tr|A0A1J7HCU8|A0A1J7HCU8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0019800 LjG1.1_chr1 2467023 2470123 +
2 domain predictions
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LotjaGi1g1v0019800.3
n.a. Altered inheritance of mitochondria protein 32; TAIR: AT4G26620.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|O40626|NSP1_ROTH6 Non-structural protein 1; TrEMBL-Plants: tr|A0A1J7HCU8|A0A1J7HCU8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0019800 LjG1.1_chr1 2467023 2470123 +
2 domain predictions
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LotjaGi1g1v0019800.4
n.a. Altered inheritance of mitochondria protein 32; TAIR: AT4G26620.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|P08197|CYC6_CHLRE Cytochrome c6, chloroplastic; TrEMBL-Plants: tr|A0A1J7HCU8|A0A1J7HCU8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0019800 LjG1.1_chr1 2468451 2470088 +
2 domain predictions
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LotjaGi1g1v0020600.1
n.a. Altered inheritance of mitochondria protein 32; TAIR: AT4G26620.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|P43469|AGAL2_PEDPE Alpha-galactosidase 2; TrEMBL-Plants: tr|A0A1J7HCU8|A0A1J7HCU8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0020600 LjG1.1_chr1 2534043 2537769 -
2 domain predictions
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LotjaGi1g1v0611500.1
n.a. Altered inheritance of mitochondria protein 32; TAIR: AT5G40510.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|Q6BPT6|AIM32_DEBHA Altered inheritance of mitochondria protein 32; TrEMBL-Plants: tr|C6TN86|C6TN86_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0611500 LjG1.1_chr1 115679705 115685563 +
4 domain predictions
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LotjaGi2g1v0241000.1
n.a. Altered inheritance of mitochondria protein 32; TAIR: AT3G27570.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|Q6BPT6|AIM32_DEBHA Altered inheritance of mitochondria protein 32; TrEMBL-Plants: tr|A0A0S3T7F2|A0A0S3T7F2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0241000 LjG1.1_chr2 70293965 70298919 -
4 domain predictions
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LotjaGi2g1v0241000.2
n.a. Altered inheritance of mitochondria protein 32; TAIR: AT3G27570.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|Q6BPT6|AIM32_DEBHA Altered inheritance of mitochondria protein 32; TrEMBL-Plants: tr|I1N5J9|I1N5J9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0241000 LjG1.1_chr2 70294043 70298842 -
4 domain predictions
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