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LotjaGi2g1v0241000.2

Overview

Field Value
Gene ID LotjaGi2g1v0241000
Transcript ID LotjaGi2g1v0241000.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Altered inheritance of mitochondria protein 32; TAIR: AT3G27570.1 Sucrase/ferredoxin-like family protein; Swiss-Prot: sp|Q6BPT6|AIM32_DEBHA Altered inheritance of mitochondria protein 32; TrEMBL-Plants: tr|I1N5J9|I1N5J9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0241000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:70294043..70298842) extracted from Lotus japonicus Gifu genome v1.2.

GACCGTTTTGAACTTATTTTCATAAGCTGCTCAGGATATTTTATGCTTACATATAACTTATTTTCAATTTATTTTAATAT TTTTTTTAAAATAGCTTATTAATAAGCGCTTATGCCATAACCACTTATGATCATAAACACTTAATTAAGCTGTTTTCTCA TATGAGACATAAGTTTAATGAAAATCTAAACAAGTACATACTCACATTTTAAAAATCACTTCTCCCCCTCACAAATTAAC AGAAATAGCCTTCTTCTCCTTGAATTACAAACGTGTTAGATGTGAGCTATTAGCTAATTGACTTTGTGAAATCCTGCAGT CTCTGACTGTTAGGTTGAAGAGGTAAGTAAGAATGGCATTACCATTTTCACGCCTCATCAGAACCTCCCTTTCTCATTCC GATCACAACCCTCTCATTCTCATTCCCGCCGCCGCCACCATGACTTCCGACGCAAATCACGGCTTCTCCCGCCCCGAGAT GTACAAGGACAACCTCGCCGGCACCGTAGACGCCTACCACCGCCACGTGTTCCTCTGCTACAAAAACCACCACGCTTGGC CCGCACGCGTGGAGGCCGATTCTCTACCCAAGCGCGTCGCCGACGCCTGGAAAGCTCGCAAGAATCTCATCGCCGTCAAG GTAACTAACTAATTGCCGTTTTGAGTTTCTGAATTGAATTGGATTCGCGTTTTGGAATTTGGTTGTTGTTGTTGGCAGCA GACGAAAATCACGGTGTGTGAGGCGCGTGAGGAGGATGATTTTTCTCAAGGAGATGTCTTGATTTTCCCGGATATGATCA AATACAGGTAGGTAACACACATTATTTTGTTTAGATAGAATTATATATGTCTGACCTTTGTCTCACTGATCAAATTAAGT GCGTGAAAACCCAAAGAATTTCCAATTAAGTTTGAATAAATCATACTTTTATATAAGATTCCTACTATTTTTACAAAAAT ATTATTTTTTTCATATATTTCTCTATGTGATTAATTTCTATGCACTGTTGGTGTAAAATATTATACATAATCATTCAATC ACATTATTTAATTTTCTATTTTAAATATCATTAAGTTTAAAATTAATTATGAACTAGTAAAATGAAGTGATGTGATTGTA TAAATGTAAGTGCATAGAAATTAATCTCCTCTAATATATTTCGGTAGTGAATGAAACGAAATGCATTATAACTTTTATTT TATTATAGTGCTACCTTTATTTTAATCATTTTGAATGATCCATAAAAAAATCATTTTGAATGACATTTTATGAATGTGAA GTAATAAAGATCAAAGCGAAATTTTATAATTCTATTGGGCTTAGCTTTGTCCGAGCCAGTTGGCCCAAGGGTCCTTTTTA TTGGTTTCTTTTATTTGCTAGCTTGTACCAAAAACAGTTTCATACCTCAAATTGGGGAAGAAAATGGTCGAATATAGTGG AACGGAATTGAAATAGTTATGTTTATTCCATTTTCTTACCAATCCAAGCAAAATTTATATTATAATTCCATTACATTTCT CTTTATTCCATCTAATTTCATTCCAAATATACTTTAGTATTTAAAAAATTTAAGAGACAGTTTAGTTAGTTTCTTAATAA GCATTTATACATCGAAAATGAAAATTTTCGCTTCTACACCTTCTTGGCTTCTTTTGTCATGTTTCCCTATCTAATCTAAC TTGTTTACGAGCAGGTATAGATTTACAAGCACTTTTCCCTAAATTTGAAGCTAATCCAAACTATTAGGCCTAAGTCACTT GTGTTTGTTTCTTCTAATTTCCATTTTTTGAATGTAAAAGGTGCATGTTTGGAAACTCTTATGTAAAAAAAGTTGAAGTC AAAATGATAGTGGATATGAGCAATTTTTTGTTGTTGCTTTTGCCTCTATTCACGATTAATTTGTTTTCAAATGAGTTTCC AAAGATGCACTAAAAAGACCGATAGCAAAGCGTTTTTATGTTGAAATGAAGTTTGTGTATTGAGAAGTATGTGTTCATTA TTTGTCTTTGCTTGATTGAAAGGGGTTTGGAGGAATCGAATGTTGATAGCTTTTTCGATGACGTTATGGTGAGCGGTAAA TTGTGGAGTGGCGGAGCACAAAATGTGTTTGCGGGTTCGCATATCTTCGTGTGTGCTCATGGAAGTCGCGACGTGAGGTG CGGTGTTTGTGGACCGATTCTCATAGAGAAACTCCACGAGGAAGTTCAGCTCCGCGGATTGAAGGATCAGATATCTGTTA TGGCGTGTTCTCATGTTGGTGGTCATAAGTATGCTGGCAATGTAATCATATTCAGCCCAGGACAAGATGGAAAATTTATG GGTCACTGGTTTGTCACCTCTCTCACTTGTATTACATTGTGATTATAACACACTCTTGTTTTGATGGAACATAGTGCATG TTTGGAAAATTCTTCTATGATTGATTCTTAAGTCAAAATCAATTCTGCACTGGGTGTCAGAATTGATTCCGAGAAAAAAA AAAAGATGATCCAAACATGCTGATAGTGTTGTTGGTTTAATTGTAGTGCCTTATAAATAATTAATTGCAGGTATGGCTAT GTTACTCCTAGTGATGTGCCTGCCTTGTTGGACCAACATATTGCCAAGGGAGAGATCATACAAAAACTTTGGAGGTTGCT ACTTCTTTTCATGTACATCTGCATTTCCTATCCTTTTTAATGAAGTGTTAATTTGAAGGATAAATTGTTTGTAAATTAAG ACAAGAGAAAAACAATTATAATGTGTCTTTTAGATTCTCAAGCTAATCTTCCATTAGTTATTAAATTGAATTATGTTAAA TTGTTTTCAGGGGCCAAATGGAGCCACCTGTTGCTGAAGTTAAGGGAGCAGATGACCAGAAGCTTGCTAACGGGGATATT ACTCGCAAGGCCAAGAAGAATGATGAAGAAAGTAAAGATGAAAATGTGGCTGGTTGTTGCCAGGGGCTTAGTGGGGTTTC TTGCTGCAGAAGTGGAAGTTCTGAGTATAACAAAGGGACAGATTAAGCACAAGAAAACCAGGGGAGTTAAATAAGTTGGA GTTGGCCTGTATAAGCTTCTATTCATTGGAAGTGGAGAAATATGAAGTCTTCCAATAGATATAGTGAGGAAAATTACATT TTTTATTTTAAAAAGTTTCAATACAATTATGACTATTGTATTTGTTTCTTTACGTTATTGGCTTCCAGGTTTTAGAGTAA ATTCAAAGTTTACTGTGATAATTGAACTTAAAGCTGATTGTGCCTTTCAGTAACATTCCTTTCCTTTTTTGCGGAAGGGG CGTTCCATGTCTTCGATTCTCTACTCGAGCATGTTCAAGGCTTAGTTTGTTGTTTGAGCCAGGATTTCTAGGGAGCTTCC TGGTGTTGATGCAGCGGCGTGGGAGAGGTGATTTGTACACCATGTTCCTCTTGTTGTGGCGGGAGAGAGTTGTTTTCTAC GCATGTTGGATAAGTCCATTTGACAGTCGATCAAGGGCAAGGAAACTAGGATTGTTGGAGTCAGTACCTTTGAAGGAAAT ACCTCTTTGAAGGTCTATCTTAAAGAGTGAAGACAATGATGCTCTGGTGCCTGAAAGAATGATCAAGCCCAAAGCCGAAG TTGAGAAGGGTTAATGGTTCTTCAACAAGTATGTTAAAGACCCACAACCCGAGCCTAAGACTCTATCAAGGTCTCAGAAG AGGTGAAGATAAAAGAATAGAGCCATCCAGAAAATGAAACAAATGATAAGCATGCTTGGCTCAGTAAAGATCATTGAAAG GGAAGAGGTGGTATCCCCAAGAATACCTTGAAGGAAACGACTTAGATGGCTGCTCTAGTTCATAAAGAGGAATCATTGGC AAAGTCTCTTGAACAGAGTATTAACCAGTCGATCCCAAGAGTGCAAACACTCAAACTTCAGGAGAAGAAGAGGAAGGACT CAACCTCGAATTTTCCATAGCCGATGAAGAGTTGAAAACCTTGTTAAAGGATGACAACTTATTGGATGTTGCGGCTGCGG GTGCGAGTTCCCTTATGAGTTTGTTCCAGTGCAAGGTTGAGATGGAACCTTAGAAGGTGACTTGCTCGTAGATGAAATGG AGTGGGCGTCACTTGTAAAACCACCACTAAGGTAGCCCTGCCATTCGAGGAAACCCACAAAGGACATGACAAAGCACCTC AAGCCTATCTATGTCACAACTCATATCAACGACAAGTCTATGTCTAGGGTTTTGCCGATCTAGGGGCTATGCTCAACGTT ATACCATTATCCACTTTGAGGAAGTTGGGAAAATCCTCAAAGGATCTATTTGAAACCAACTTGAAGATGTCTGATTTCAC AGGAGGATCAACAAAGGATGTCAAGGTACTAATTGCCGACATCATGTTAAGTCTCAAGGCTAGCCAATCTGCTTTCTTTG TGGTAGATGGTAAGCTCAACCGCAATGTTTTGTTTGGATCCACCCAAACTTGTGTGTGCCCTCCACTTTTCCCCAATTTT TGATCTTCTGGGTGAGAGGCATTGTTGGGAATTGACTCATTAGTAAAATCTTGGGGCCACAGATTTTATTTTGAGGCCAA AATTTCAGTTTATTAGGATTTGATTTAATAGGGAACACAATCCCGGAAATCAAGATTCAAGAGCTGAGCAGTTGATCTTC ATGAGGGTTCGAGAATTCGCCAAGGTGGAGATTGTTGGGATTGACTCATTATCTTATCAGTTATTTGTATTTGATTTAAG AGGATTGTGATATGAATTTAGAGAGACTCTATCTTATCTGATGGGTTTAGATAAGACTTTATCTTATCTTATGGGTTTAG
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0241000.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCATTACCATTTTCACGCCTCATCAGAACCTCCCTTTCTCATTCCGATCACAACCCTCTCATTCTCATTCCCGCCGC CGCCACCATGACTTCCGACGCAAATCACGGCTTCTCCCGCCCCGAGATGTACAAGGACAACCTCGCCGGCACCGTAGACG CCTACCACCGCCACGTGTTCCTCTGCTACAAAAACCACCACGCTTGGCCCGCACGCGTGGAGGCCGATTCTCTACCCAAG CGCGTCGCCGACGCCTGGAAAGCTCGCAAGAATCTCATCGCCGTCAAGCAGACGAAAATCACGGTGTGTGAGGCGCGTGA GGAGGATGATTTTTCTCAAGGAGATGTCTTGATTTTCCCGGATATGATCAAATACAGGGGTTTGGAGGAATCGAATGTTG ATAGCTTTTTCGATGACGTTATGGTGAGCGGTAAATTGTGGAGTGGCGGAGCACAAAATGTGTTTGCGGGTTCGCATATC TTCGTGTGTGCTCATGGAAGTCGCGACGTGAGGTGCGGTGTTTGTGGACCGATTCTCATAGAGAAACTCCACGAGGAAGT TCAGCTCCGCGGATTGAAGGATCAGATATCTGTTATGGCGTGTTCTCATGTTGGTGGTCATAAGTATGCTGGCAATGTAA TCATATTCAGCCCAGGACAAGATGGAAAATTTATGGGTCACTGGTATGGCTATGTTACTCCTAGTGATGTGCCTGCCTTG TTGGACCAACATATTGCCAAGGGAGAGATCATACAAAAACTTTGGAGGGGCCAAATGGAGCCACCTGTTGCTGAAGTTAA GGGAGCAGATGACCAGAAGCTTGCTAACGGGGATATTACTCGCAAGGCCAAGAAGAATGATGAAGAAAGTAAAGATGAAA ATGTGGCTGGTTGTTGCCAGGGGCTTAGTGGGGTTTCTTGCTGCAGAAGTGGAAGTTCTGAGTATAACAAAGGGACAGAT TAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0241000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALPFSRLIRTSLSHSDHNPLILIPAAATMTSDANHGFSRPEMYKDNLAGTVDAYHRHVFLCYKNHHAWPARVEADSLPK RVADAWKARKNLIAVKQTKITVCEAREEDDFSQGDVLIFPDMIKYRGLEESNVDSFFDDVMVSGKLWSGGAQNVFAGSHI FVCAHGSRDVRCGVCGPILIEKLHEEVQLRGLKDQISVMACSHVGGHKYAGNVIIFSPGQDGKFMGHWYGYVTPSDVPAL LDQHIAKGEIIQKLWRGQMEPPVAEVKGADDQKLANGDITRKAKKNDEESKDENVAGCCQGLSGVSCCRSGSSEYNKGTD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31902:SF12
32 310 279 1.0E-116 –
PANTHER
PTHR31902
32 310 279 1.0E-116
IPR009737
Pfam
PF06999
48 257 210 3.6E-46
IPR009737
CDD
cd03062
157 259 103 7.29866E-42
IPR009737
Gene3D
G3DSA:3.40.30.10
157 264 108 5.6E-23
IPR036249
SUPERFAMILY
SSF52833
159 262 104 2.24E-21
IPR036249
MobiDBLite
mobidb-lite
270 295 26 - –
MobiDBLite
mobidb-lite
271 294 24 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0241000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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