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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0252600 |
| Transcript ID | LotjaGi2g1v0252600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MAR-binding filament-like protein; TAIR: AT5G14970.1 seed maturation-like protein; Swiss-Prot: sp|Q9UJT2|TSKS_HUMAN Testis-specific serine kinase substrate; TrEMBL-Plants: tr|I1N5Z4|I1N5Z4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0252600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:71815425..71823198) extracted from Lotus japonicus Gifu genome v1.2.
CAGTCCATAGACCTTCTTCTAAAAAGATTTGCCCTAATTATCTAAGATTTACCTAGATTACTCATTACTAAAATAAATCT TACTGCATATATTTACAAGAATCATTTTTTATTTTTTCTCATGATCTATAATATAAAAATAAAATATGTCATGCTGAGAT TATAAAACATTAAAATTTTAAAAGATTTTCCCTAATTATCTAAGGTACTGCATCAGACATCTCTAAATTTATTTTCAAAA TAACTCTTACTGCATTTTTGCAGGAATCCTTTGATTTCTCCTTTTATCCTTTCTCATGATCTACAATATAAAAATAAAAT ATGTCATGCTGAGATTATAAAACATTAAAATTTTAAAAGATTTTTCCTAATTATCTAAGATATTGCATCAATCATCTCCT CCACTATATATACCTGTCAAACTCTCATCCTAAATCATCTCTTCTCCTTTTGTCAAATTACACTTTTAGTTTTTTTGTTG TTCTATAACCTGAAACTTGCGATGGCCAATTCCCTTGCACTAAATTTCAAAACTGAAGATATATCTACAATCAACCCTTC CAAAGATACATGGGCAATTATTGCTATGCCCATCCGGTGTGGGTAGTCCCCCTAGCTTCTCTGGATTAAAATTGCCCTAC TCCATGGAATTAGTGCCGATGGATGCCAAGGTGAAAATAAACCTGATTTCTGTTTATTATATTTTACCTTCATTGTACAT TTAAATCCTAATATTTTGTTAAATAATAATAGGGTTGTAAGATCCATACTTTTGTAAGGAAGTCTCTAATTTATAAGTTC CAGCCTTTACTTAACAAGGGACACGTTTATCAGATTTCCTTCTTTGGAGCATGGGAAAGCGGAGGAGATTTCAGAACAAC CTCCCATGCATACAAAATCAATTTTCAGTATATACATCTTTGCGGTTGGTTACATATGTGCCAATCAACATGTGCCACGT CTTTTTACTCGTTAATGACATCAAAGAGTAAGGGCTCATGTTGATTGGCACGTATGTAACCAACCGCACAGATGTATTAT ACTGAAAATTGATTTTTTTGTATGCATGAGAGGTTGTTCTGAAATCTCCTCCGCTTTCCCCCACTCCAAAGAAGGAAATC TGATAAACGCGTCTCTCGAAGTAAAGGCTGAAACTTGTAAATCAGAGACTTCCTTACAGAAGCGTGATCTTACAACCCTG TTATTAATTTAACAAAATATTAGGATTTGAATGCACAATATAATAAACAGAAATCAGGTTATTATTTTCACCTTGGCATC CATCAGCACTAATTCCATGGAGTAGGGCAATTTCAATCCAGAGAAGTTGGGGACTACCCACAACCGGATGAGCGTAGCAA CAACTGCCCATATATCTTTGGAAGGGTTGATTGCTGATATAAAGGAATTTCAACTCCCCAACTACAATTATAGCCAAATC AACTAATACTTGCTCGCAATTCCGCAACACAACAACAACCAATCGCAACGACGGCCACAACCCCAATTTAAAACTACTCA TATTCTCATTTCATATTTTTAGTACAAAAAGATACTAATAATGAGGTCAATGACTCAATGTAGTGTTTGGTTCATTGTTA TGTTAAACCGGTTGAACCATTGGTCAATGTCGACTCTAGCAAGTGCAAGACAAGATTACTTACAACTTCTCCACAAACCA CAACATTGTTGGTATTGGCAGCAACAATTAGCAAAGGCTAAGGTTGAGGTTACACACACGTTGTTGGAACAGGTGGCACT GTGTCGTTGCTCTTGTTCCTTCCTTCCTTCCTTCCAATTCCATGGCAGCACTCTCATGGCGACCCTTCATCCTCTCACGC CTCACCGACCTCTCACCCAATCCTCTCCACCCACCCAAGCCACCACCTCTCTTCCTCCGCCGCCGCCGCTGCTTCCTCAC CTCCTGCTACGCCGATGGGTTCTCGTCGTCCTCTTCTTCCTCATCCTCTGACGATGTCGTCTCCACCCGGAAATCCACCT TCGACCGCGGCTTCACCGTCATCGCCAACATGCTCCGCCGCATCGAGCCCCTCGATAACTCCGTCATCTCAAAGGGTGTC TCCGACGCCGCCAGAGACTCCATGAAGCAGACCATCTCCACCATGCTCGGTTTGCTCCCCTCCGATCACTTCTCTGTCAC TGTCACTGTTTCCAAGCACCCCCTCCATCGTCTTCTCGTCTCTTCCATCATCACCGGGTGGGTATTTCATCATTTTCACT GCTTGATTTTCAATTTTTGTGTATTTGGGATTTTTCTTCTGATGGGTTGTTTTTTTGATAGGTACACTCTGTGGAATGCG GAGTACAGGATGTCCCTGACGAGGAATCTGGATATAGCATCGCCCTGTGGTGCAAGAGATTCGGATTGTGAGAAACGTTC AGAGATCTTGGAGGTTAAGGGTGGAGGAGAGGATGGTGGGGAAATTGAGGTTGCTTCTGATTTGGGGCTCAAGGATTTGG AAAATTGCAGTAGTAGCCCGAGAGTGTTTGGAGATTTGCCTCCTCAGGCTCTCAATTACATTCAGCAGTTGCAGTCTGAG TTGACAAATGTGAAGGAGGTAACCTTTTTTTTTAAGTTTTCTTTTCTGGCTCCAATGGTTGTGGAATAGTTGCAGTTTTG AGAGAATCTGCAATGCTTGATTATGATGAAGAGGTGTCTTACTTGAATTGAGTTTGTCTATTGGGGATTGGGAAAAATAA GACCTCACCTTAATGGATGAATAATTCTTAGTGCTTGTGAAATGTTTACTTCTTATGTATGTGCCAAGTAAGTTGAAATT TGAATCAATGTATTGGAAGGGATTGTATAATCTTACTTTAGATTATTTGTATGGGCTTGTGTGGTGAAGACCTATATAAG CTCCATTAAGGAGAGTAGTTTAGATGAAGAGGAGTATGGTATTAGTGGAAGAGAGAAGACCAACAGTAATTCTTAGTGCT TTTAAAGTGTTTACTTCTTATGTATGAACCGAGTAAGTTAAATTTCTAGTTAGTGTATTGGAACTTGGACCAAGATATCA CCTTATTAGGATTGTGGAAAAGATGGTCGAAGCTTAATGTAGGTTATATGGGCATGTGGTGGTGAAGACCTATATAAGCT CCAGTAAGGAGAGTAGCTTAGATGAGTAGTAGTGTAATAGTTAGATGTGGAGAGAAGACAAACAAAAACTCTATATGTCA AACTATTCTGAAGGATTTAGATTGAAATTATGTGTCATTAGACATGATTTACAATTGGACGTTATAGCATTGTTTGGTCT ATTTAGCGCACCTTATCTGGTGGGAAAATACTTTCATGGTTGATTATTGGGATTTTACACGATAAATTGAAAATCTCATT GTAATTCTCTCACATTTAAAAATTTCTCATATGAGGGGAATATTTACTCATAGTGAAGGAAAAAAAAAGTTACCTCTGCA TTCCCTTCCTCTTCAAATTCCTCCATCCAAACATATCCTTAACTAAAATATAAATAATGAAATTCTTGAAACTGATAAAG GGAAACAACACATAGGAGATTTCTTTCTGCAAGGGAGAAGGAATGCCTCCTTTGGCTTCTCAAGGCTTAATGTTGCTTTA TTGAATATTGACATGCCTTGCGATAGCCCAATGGTAAGGAGGCACCACTCCTGTTTTGTAGTACAAACATTGACGTTATT TTCAACTCCTGTAGTGTGTACTCCAAATGAAGTGCTATTGTTATTGCTCATAGGAGATCATTTAAAAGGCAAGCTTAAAG AGTCAAATGTAATGTGAGAGTTTTGCTTTTCTTTCAGGAGCTGAATGCCCGAAAGCAAGAAATGATGCAATTAGAATATG ACAGGGGAATCAGGAACAATTTGTTGGAATATCTCCGGTCTTTGGATCCTGAAATGGTAACTCCTCACTATATCTCTTTA ATTAATATTTCTTGTAATTGAAAGTTTTGCTTTTCAAGTTAAATTGCAAAGAAGTTCTGCCTTCCTCTCCCTCTCCCTCT CGTCTATTTTCATTCATGCAGGTCCTGAGGCTTGTTTTACGTTGTTAATCTTTCCGTATGTAACTTGTCTTGACAGGTGA CTGAACTGTCTCGACCTTCATCGGTAGAAGTGGAGGATATAATTCACCAACTTGTTCAGAACATATTAAGCAGATTCTTT GTGGATGATGCTAGTGGTAGCTTTATGGAACAATCAGTAGAAGGAAACATAGACAATCATCCGGACAACGGTGATGAGTT TAGTGATACAGTAGGCACTTCTCGTGATTACCTTGCAAAGTTGCTTTTCTGGTTAGTTACTGTCATTACCCTTCAAAAAC TTGTGCTTCATATCTTCAAATTAATCATATACATGACCCTGTTAGCCAATTTTATCCTTAATTGGTGTGCTATCGTATTT TATGTTTCGCAGGTGTATGTTGTTAGGTCATCACTTAAGAGGATTAGAAAACAGATTGCAACTTAGCTGCGTCGTTGGAC TGTTGTAGATAAGATGGTGGAAGGCTTGTATATTCTTTTCTTCCTCTTTTTCTTTTCATTCCTCCCCCCTCCCCGTAAAT TCTTTTCTGTAAAAGTAGTAAAACTGAAAGTATGGAATAATCTGGCGAATGCCATGCTTATAGCGTTTTTTTGTCTTATT GATTACTCCAAGCCTTGAAAAAGCATACAACGTGAAAGTCAGGTACTGTGTCATCTGTCATGTTTATGAATGCATGAATA ATGTGGTAAGTGGTAACGCAAATAGAGCACCCTCAATCTTCTCAGGATGTTAGGCAAGGTACTTTGAATCATTAAGAACT TTGTGTGTTTATGTAAGGACTGTGCGGTAGGAGGAATTAATCTTGATAGTTAATATTAGATTCAAGTAAAATCGATTATA TCTATCCATGTAAAATGGAATGGTCAAGATGAGGTCTTACCCCGTGCTCTCACATGATTACGGTACCTGCAAACGCACAA GCAATATATTTGGATGTCCCGTTGGCAGTAGTGCAAGCTGATTTTGGCACACATTTCAAGATAAAAAGTGAACGAATCTC TTCCTATGAATTGAGATGAAAGTCCGTTCTTATTGCACTCAACTTGTTTTGAACACACTAGGAAATCTTCGTTCATACCG AGAGTCCGTGCTCTATTGCAATCCCACTCCCCTCGTTGTTTTGGTTTTGGTGAGTGGTTGTATGAATAATAGCAGGGGCT GCCATGGTAACAGTTTTGTTGGAGGCTTGGAGTTATTAGTGATGCAATGCTACAACTTGCTGAATAATCCATGAGAAATC ACTTTGATTTGTCAGGTGACCACGTTAAAGGGGGAAGTGCTCTCACATTAACTTCTTCCACTTGGAACACAACCACAAAC CTGATAATTTTTCAGCTTGTAAACAGTGACTCCAGTTCTAAACAATGGAAATAAACCGATAAGAGTGGGGGATGGTAAGT CTGTTACTACCTAATGCTATTTTAGGAAACAAGGGACAGAGTTTCTACATTTGGGTTTGGTTTAATTTATTTTATGTTTT AAAATTATTTTAATCAGTGTATGAAGAAAAGAAAAATCTTGACAAAAAATGGTTGCAAAAATCAATTATATTTGTTGTTC CCTCCAAATTCAGGCGTCTTAGCCAAGTGCTTGGGAGTGCTCAGCTCAAAGTTCAAGAATCCGTAATGAGTGAAGATGTC TTTTCTGCTAGGCCAAAGCTCCCTTATAATATATCACTTTGGCATTTGAGTTGCTGGAGTTTCACACTGTTTTGTGATGT ATTAATGGTGTTCATAATTTTGGTAAATGAACATATCTGGAGGTTACATGTGCCCCCTTGTTAGGTTTTCCTTTATTGCT GGGTTAGGTTTGGGTTGGACTTCCCTCTTCTAAGCTGGATTTGGACCTAAAAAAACAAAGTGGAATTATTTGAAGCATCT TCAGAATATGGCTTTTCTGGTATGCAAGCTTAAACGTAGAGTGCTATTTACTCTGATGTAGAAAAAGTGCTATATTGTTA AAACTAACACATGAGCTTAAGCATGTCTCATGGCAAGGGTCTAGAATCTTCATCTCATATTCTTTACTCTTTTATTGGTT TGCGTGGAGCTCAACCAAGCTATCACATGGATCATTTGTGAAGCCATCACTCTGATCACTTGTGTAATATAAACTGAGTG AATCCTTTTATATTGAAATTCAATCTTATTGTATTAAAACTTTATGTCTATTTAACTCTATCAAACCAGACCCCATCTTC TTACAGATGATTCTGTGTTGTGCATCAGCTTATTTTTCCTCATGATGTCCTTTCTCACTACACTACTGAAGATGTATCAA CAAACATTATAAAAAAATCCTTTGATTGTTCTGTCTATACACTCATTAAAAAAATCATGTTCATTACAAATGAATAAGAA TTAACCAATAAAAAAATCTGCAGTTTCCTAAAATAATGAATCTGTATGATCATTTGATATGTGGAGATCATAAGGCTGCC ACAGAAAATCAACTGAGCAAGGCTTTCTAGCATCAAGCCTTGTCCATGGCTTCCCTTTACCACTCCAATGAAGCAAACTC ACTGGACCAGGATGCAAAGTCCTGCAACTATTCACAACATTGTCCCCTCCAAGTCCATGCTGGTTCCATCTATGTTCTAT AGGCTCAACATCTCCACCAAAAACCATCAAAAACGGTGGAAGCGAACCGAGCTCGTAAATCCTCCTCTCCTTCTGAATCT CCATCCATTTCTCAATCTTCCTAGTGTAATCACCTTCCCTCCACCTCACCAAATCCATCACCATCACCCCAGTGTTGAAA TAGCAGGGTCTTTTCCTTCCTCCAAAAACCTCAGAAAACTCAGAACTTGACCAGAACTCATAGGAAAAATATCTGGTGAA ATTTGCATGACAATACTCAGGAGCACCAATCACTCTTGACCCCGACAACGAAACCTTCCATAGCGTTTGAACATCATCAA CAACAATAACATCGGAATCCAAATATATAACTCGCTCAACGCACGGGTCTAACAAATCAGCAAGGTAGCTTCTCGCGTAG TTCAAGGGGCTCTCGAGCGCTTGCCGGATCGAAGGAGAAATGAGATTCTCAACTAGGCTTTCCCTGAAGACATGAACTTT GAATCTCAAAGAAGGAAATGAAGTCTCAACAATCCTGGTAAAATCCTCCTTGTTCTCCAATCTTGCATCTGATGCAATGA AATGGAAAAACAGATTCTGGGGGCAGGAAGAGTGTTTGAGAACAGAATGAACAGCAGCTACAGACCCTCTTAAATATTCC CAATCAATGTTCATTGCAATATGAACAAGTGATGGATCACACACCAAATTCTCATTGTTTGTATCAATTACAGTGCATCT CTGCTGGTTTCTGTATTCTGGGGCCTCTCTAAATAGCAAAAAGGAATCAACTTCAGCTTCAGTTTCAATATCTGAAATCC TGTTGGCAAGAGATCGAATAGCATTGGATGGAGATGAAAAGAGAAGGATAAAAACTGTGAAGACCATCACAAAAAGCATT GATCTAGAAAGAAACATCACTACCACCTTTCTGTTCCAATCAAAACAGGTTGTTAATTGATTGACAGAACAAAGAGAATG CAGAAAACAGAAGAAGATGAGAGAAAATGGATTCAACAAGACAAAGAGAAATGTCTATGTCTATGTCTAAGTTGTATATA AATGGAACAAAGAAACGTTAACGCGTTTGTTATGATGTCATGTCTAGAAGAAGCTTCAGCGGTGAGAATTGGACTCAAGC AAAGGAAAGGAAAC
CDS sequence (LotjaGi2g1v0252600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGCACTCTCATGGCGACCCTTCATCCTCTCACGCCTCACCGACCTCTCACCCAATCCTCTCCACCCACCCAAGCC ACCACCTCTCTTCCTCCGCCGCCGCCGCTGCTTCCTCACCTCCTGCTACGCCGATGGGTTCTCGTCGTCCTCTTCTTCCT CATCCTCTGACGATGTCGTCTCCACCCGGAAATCCACCTTCGACCGCGGCTTCACCGTCATCGCCAACATGCTCCGCCGC ATCGAGCCCCTCGATAACTCCGTCATCTCAAAGGGTGTCTCCGACGCCGCCAGAGACTCCATGAAGCAGACCATCTCCAC CATGCTCGGTTTGCTCCCCTCCGATCACTTCTCTGTCACTGTCACTGTTTCCAAGCACCCCCTCCATCGTCTTCTCGTCT CTTCCATCATCACCGGGTACACTCTGTGGAATGCGGAGTACAGGATGTCCCTGACGAGGAATCTGGATATAGCATCGCCC TGTGGTGCAAGAGATTCGGATTGTGAGAAACGTTCAGAGATCTTGGAGGTTAAGGGTGGAGGAGAGGATGGTGGGGAAAT TGAGGTTGCTTCTGATTTGGGGCTCAAGGATTTGGAAAATTGCAGTAGTAGCCCGAGAGTGTTTGGAGATTTGCCTCCTC AGGCTCTCAATTACATTCAGCAGTTGCAGTCTGAGTTGACAAATGTGAAGGAGGAGCTGAATGCCCGAAAGCAAGAAATG ATGCAATTAGAATATGACAGGGGAATCAGGAACAATTTGTTGGAATATCTCCGGTCTTTGGATCCTGAAATGGTGACTGA ACTGTCTCGACCTTCATCGGTAGAAGTGGAGGATATAATTCACCAACTTGTTCAGAACATATTAAGCAGATTCTTTGTGG ATGATGCTAGTGGTAGCTTTATGGAACAATCAGTAGAAGGAAACATAGACAATCATCCGGACAACGGTGATGAGTTTAGT GATACAGTAGGCACTTCTCGTGATTACCTTGCAAAGTTGCTTTTCTGGTGTATGTTGTTAGGTCATCACTTAAGAGGATT AGAAAACAGATTGCAACTTAGCTGCGTCGTTGGACTGTTGTAG
Protein sequence (LotjaGi2g1v0252600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAALSWRPFILSRLTDLSPNPLHPPKPPPLFLRRRRCFLTSCYADGFSSSSSSSSSDDVVSTRKSTFDRGFTVIANMLRR IEPLDNSVISKGVSDAARDSMKQTISTMLGLLPSDHFSVTVTVSKHPLHRLLVSSIITGYTLWNAEYRMSLTRNLDIASP CGARDSDCEKRSEILEVKGGGEDGGEIEVASDLGLKDLENCSSSPRVFGDLPPQALNYIQQLQSELTNVKEELNARKQEM MQLEYDRGIRNNLLEYLRSLDPEMVTELSRPSSVEVEDIIHQLVQNILSRFFVDDASGSFMEQSVEGNIDNHPDNGDEFS DTVGTSRDYLAKLLFWCMLLGHHLRGLENRLQLSCVVGLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 360 | 360 | 4.4E-165 | – | |
| PANTHER | 1 | 360 | 360 | 4.4E-165 | – | |
| Pfam | 76 | 155 | 80 | 2.0E-18 | ||
| Coils | 219 | 246 | 28 | - | – | |
| Pfam | 253 | 356 | 104 | 2.9E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0252600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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