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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0253800 |
| Transcript ID | LotjaGi2g1v0253800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein ENHANCED DISEASE RESISTANCE 2; TAIR: AT1G10410.1 CW14 protein (DUF1336); Swiss-Prot: sp|F4JSE7|EDR2_ARATH Protein ENHANCED DISEASE RESISTANCE 2; TrEMBL-Plants: tr|A0A0S3T841|A0A0S3T841_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0253800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:71984677..71988110) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTGTTTGCGGGTCTAGACCCAAGGTCGTTGAAGACCTCAAATTGAAGAAGAACAAGCATCGCCGGAGAAGAAGGAG AATCCTCCGCCGCCGCGTTTCTTCTCAGAAGATTGAAGCTGATGCCGCTCACTCTCACTCGGTTTTGCAGACTTCTAATC GTGCTTCAGGTGCTTAGTTAATGGTGGATCGGTGATAAACTGATAATTTTTAAGGACCCTTTTGTTTTTTTTTTGTTTTT AGTTTTATTTGATTCATCAGTTCAATGCAAGCGGTTAGCTTGATTTGTTTTGTACAGTTTGAATTTTTTTGAGTTGAAAT TTATGATTTTTATTTTTTAATAAATTTTTTTGATGTGAGTTTGATTGACTTTGAAGTGAAGCTTCTTGTTTTCTGTTTTC AGATGTTGCTTGGTTTGATTCTACTTCAGCTTTGGATTCTGAATGTGATGACGAATTTTACAGTGTCTATGATGGTATGT TTCATTTTCTAGTATCAAATTGTCTATTTGTTTTACTTTGATTAGCAGCATGGTTAATCATTTAATGTTAATTTCAAAAA AAAAATCATTTAATGTTTGATAGATTGGGTATGTATCTATGAATGGGTAGTGGATGCTGGTGATAGCAGGGATGGTTCTG TGTTAAGAGTGCACCCTTGTAATTATTGTTAAGATTGCTAAGAATTAAGAAAAACTTAGATTCTACATTGAAATCAGATG GCCCTTGAGCTGATCTAAACTCTGTTTGAACAGGAGAAGTGTCTGCAAGTCATGGAGATGAGATTGGAGAGGACAGAAGG CTAACCCCAGATCATTGTGGGATGCTGCAAAACACCTGCTTGCCTTGCCTTTCTTCTAATGCAGTTGCTGTAAATGAGAA GAAAAGGCCAACGAGTCCCGATGCACAAAGTTCGCGGAGAAAGTCGCTTTCCAAATTGTCCTTTAAATTAAGGGAAGGGA GTTCTGACATGGCATTATGTGAGTGTTCTCAGTATTTTTCATTGCTTTCAATTCTTTTGAAACTCGGATTTGGGTTTTCT GCATTTAGGGCAATCGTAGATTCATGCAGTCAAGAAATCTGCTCCATTGGTCAACTCATATATTTTATAAAGATCTGCTG GTAGAGATTAGCTTAAGATTTGTGACTGCGTGAATTTCGGAATTATATGACTGGAGAGAATAGGAGTTCCTGTTCTATAT GAATGGAATGATTAGAATTTAGAATGACTGAAAGTGATGATACCAAGTTCGCTTAAGATTGAACTTTGTTTATTATCTCT TTCTGTTGAGCTTGTTGTATTATACACTTTTGAACTTTTAGATGTTTTGCTGCTAGTTCTTTTTATGGTATTTCTTGTTA CTAATTTGCGGTTTCTCCTTTGTTTCAGTTTCCCCAAGGTCATTGAGACAAAAACTATTAGCAGGTTCAACAATTCCATC TTGTCCAATAGAGAAGCAAACCCCTGGTTCTTGGTCACCACTTGAGCCAAGTACCTTCAGAGTCAGAGGGAAGAACTACC TTAGGTAGGCACCAAATGCATACTTTGGACTATATTTTCTTTGGGTGATTGGACAGATGTTGTTAATGGCAGATGGCGGA GAGTAAAAAATCCGCCATATTTGACAAATAATGATGGTTGATATGGCGGGATATCAGCCATGGCAGAGAGCCAAAAATCC ACCATGAGATTCTGCCATGGCGGATATTTGATAACACTGGAGTAAACATGTTGTTAGGAATGACCCTCCTGTAGAGGTCA TTATGTTAAACAATCAAGCATTGTTCCATTCTTGATGGTTCTATAATTCATTGTTGCATTGGTGGCAGGGATAAGAAGAA AGAGTTTGCTCCAAACAGTGCTGCTTTCTATCCTCTGGGTGCTGACCTCTTTTTGTCTCCCCGAAAAATTGATCATATTG CTCGCTTTATACAAATTCCTCAAATTAACATACCTGGGGATGTCCCTTCTATTCTTATTGTGAATCTTCAGGTAATTGCT TATTTCCTTGTTTAGATTGAATTTGAACCAAGAATTTCTCTTCCTTATCACTGAGGTGCAAAAATTCTGCTGGACCCCAA AATCACTTCACATTCTGTTTGTGGATAGCAACTTCATTGTTAACCTTGTATCATTTGCATCAAAAAATGTCAAAATGGAA TACACATACATGAGAATTTGGTCTTTTTTTGTGAAGATTGTGACATAGTTTTGCTCTTTGAAATGCAGATACCGTTGTAT CCCGCCTCCATCTTTCAAAGTGAAAATGATGGTGAAGGAATGAATGTGGTTCTATACTTTAAATTATCTGAAAAGTATTC TAAAGACCTTCCTGACCATTTCCGAGAAAATATCAGTGTAAGGGGGGATATGCTATTTTATCGCTTTCAACTCTATCATC CTGCCTCATGTTACAAAAAATGTTGCCTCTATAGCATCATGCTGATAGTTTTTAGAAACTTCATTAACAAGTGTGCCTGT TCTTTTGCTCTTTGACAGAAATTGATCAACGATGAAGTGGAGAGAGTTAAAGGCTTTCCTCTAGATACAATTGCACCCTT CAGAGAAAGATTGAAAATTTTGGGTAGAGTGGTGAATGTAGATAATCTTTCTTTAGGTGCAGCTGAAAAGAAGCTGATGA ATGCATACAATGAAAAACCTGTTCTCTCACGCCCTCAACATGAATTTTACTTGGTAAATACTCTTACGTACGCTAGTTAC GTATTTAATTTTTGCACTGCAGCAATCATTGCAGAAGCTTCTATTTTCGGTGAAATTTTGTTGAGAGTTGTATTATTAAA TGCATTTCAGTTTTAATGCATGCTGCTGTAAGCATTTTTAGAAGGTTATTTAGAATTTGTTCTTATTTTCATTATTGAGG GCAACGGTAAAGTTGTTGTCATGTGACTTTGCGGTCACAGGTTCGAGCTATGGAATCAGCCTCATTTGAGCATGCAAATT TGTTGACATACTAATGAACATGTGTTTCTCCATCTTTAGATTGCTTGAGTTATCTTGGAAAACTTTTTTAAGTTGCCTAG AATATTCCTAATCTGATGCTATTTCTTTCACAGGGAGAAAACTATCTTGAGATAGATTTGGATGTACACAGATTTAGTTA TATTGCAAGAAAAGGATTTGAAGGCTTCATTGATAGGCTGAAGCTATGTAACCTTGATTTTGGTCTTACGATTCAGGTAA TTTTCTTACCATTACATTGGCAACATAAAACTTTCTTCTATGATAACCAAAGTTTTAAGCTCACTCCATGTATATTCTTA TTCTCTGTTCCTTCCTTATCATTTAGGTTACTAATTTCTTTTGCATTCATGATATATACAGGGAAACAAGGTAGAAGACT TGCCAGAGCATTTACTATGCGCAATACGGTTGAATAAAATTGATCACAGCAATTTCAACCAGATTGGGTTTTAA
CDS sequence (LotjaGi2g1v0253800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGTTTGCGGGTCTAGACCCAAGGTCGTTGAAGACCTCAAATTGAAGAAGAACAAGCATCGCCGGAGAAGAAGGAG AATCCTCCGCCGCCGCGTTTCTTCTCAGAAGATTGAAGCTGATGCCGCTCACTCTCACTCGGTTTTGCAGACTTCTAATC GTGCTTCAGATGTTGCTTGGTTTGATTCTACTTCAGCTTTGGATTCTGAATGTGATGACGAATTTTACAGTGTCTATGAT GGTCATGGAGATGAGATTGGAGAGGACAGAAGGCTAACCCCAGATCATTGTGGGATGCTGCAAAACACCTGCTTGCCTTG CCTTTCTTCTAATGCAGTTGCTGTAAATGAGAAGAAAAGGCCAACGAGTCCCGATGCACAAAGTTCGCGGAGAAAGTCGC TTTCCAAATTGTCCTTTAAATTAAGGGAAGGGAGTTCTGACATGGCATTATTTTCCCCAAGGTCATTGAGACAAAAACTA TTAGCAGGTTCAACAATTCCATCTTGTCCAATAGAGAAGCAAACCCCTGGTTCTTGGTCACCACTTGAGCCAAGTACCTT CAGAGTCAGAGGGAAGAACTACCTTAGGGATAAGAAGAAAGAGTTTGCTCCAAACAGTGCTGCTTTCTATCCTCTGGGTG CTGACCTCTTTTTGTCTCCCCGAAAAATTGATCATATTGCTCGCTTTATACAAATTCCTCAAATTAACATACCTGGGGAT GTCCCTTCTATTCTTATTGTGAATCTTCAGATACCGTTGTATCCCGCCTCCATCTTTCAAAGTGAAAATGATGGTGAAGG AATGAATGTGGTTCTATACTTTAAATTATCTGAAAAGTATTCTAAAGACCTTCCTGACCATTTCCGAGAAAATATCAGTA AATTGATCAACGATGAAGTGGAGAGAGTTAAAGGCTTTCCTCTAGATACAATTGCACCCTTCAGAGAAAGATTGAAAATT TTGGGTAGAGTGGTGAATGTAGATAATCTTTCTTTAGGTGCAGCTGAAAAGAAGCTGATGAATGCATACAATGAAAAACC TGTTCTCTCACGCCCTCAACATGAATTTTACTTGGGAGAAAACTATCTTGAGATAGATTTGGATGTACACAGATTTAGTT ATATTGCAAGAAAAGGATTTGAAGGCTTCATTGATAGGCTGAAGCTATGTAACCTTGATTTTGGTCTTACGATTCAGGGA AACAAGGTAGAAGACTTGCCAGAGCATTTACTATGCGCAATACGGTTGAATAAAATTGATCACAGCAATTTCAACCAGAT TGGGTTTTAA
Protein sequence (LotjaGi2g1v0253800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVCGSRPKVVEDLKLKKNKHRRRRRRILRRRVSSQKIEADAAHSHSVLQTSNRASDVAWFDSTSALDSECDDEFYSVYD GHGDEIGEDRRLTPDHCGMLQNTCLPCLSSNAVAVNEKKRPTSPDAQSSRRKSLSKLSFKLREGSSDMALFSPRSLRQKL LAGSTIPSCPIEKQTPGSWSPLEPSTFRVRGKNYLRDKKKEFAPNSAAFYPLGADLFLSPRKIDHIARFIQIPQINIPGD VPSILIVNLQIPLYPASIFQSENDGEGMNVVLYFKLSEKYSKDLPDHFRENISKLINDEVERVKGFPLDTIAPFRERLKI LGRVVNVDNLSLGAAEKKLMNAYNEKPVLSRPQHEFYLGENYLEIDLDVHRFSYIARKGFEGFIDRLKLCNLDFGLTIQG NKVEDLPEHLLCAIRLNKIDHSNFNQIGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 428 | 428 | 6.5E-196 | – | |
| PANTHER | 1 | 428 | 428 | 6.5E-196 | – | |
| Coils | 11 | 31 | 21 | - | – | |
| ProSitePatterns | 75 | 83 | 9 | - | ||
| Pfam | 179 | 420 | 242 | 5.4E-58 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cation binding | Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge. |
Expression pattern of LotjaGi2g1v0253800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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