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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0255100 |
| Transcript ID | LotjaGi2g1v0255100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Xylosyltransferase 1; TAIR: AT5G39990.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9FLD7|GT14A_ARATH Beta-glucuronosyltransferase GlcAT14A; TrEMBL-Plants: tr|A0A0S3T7E5|A0A0S3T7E5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0255100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:72102066..72104421) extracted from Lotus japonicus Gifu genome v1.2.
GTTTATGTGATGTTTGGTTTTGGATGATGGCTAGATCTGCTGCACACGTTTTCTTACTTGCCTCGTGATCTTAATTTCAT CGATCATACTAGTGACATTGGATGGAAAGAGTGAGTTTTTGTGATTTTTTTGTTGATGTTGTTTTATATCTTGTTTTATG CATATAGCTATGAAGTTGTTTATGTGATTGGTGTTTTTTGTGATGTGTTGGTTATTAGTCATCAGCGGGCGAGGCCGATT ATCATTGATCCGGGGTTGTACATGACTAAGAAGCAAGATGTGTTCTGGATTACACAGAAGAGGAGTAGGCCAACAGCTTT CAAGCTTTTCACAGGTAAATATCATTTTCTTGTCTGTTTCTATTGCCTTTGGGTTTCTTTTTTAAGATATGTATGTCTCA TTTCCCCTAAGGGTGGATGGATAGTTAGATATTATGTGGTTGGTTGCATAGAGGTTTTGTACTTTTTTTAATATTGTCAG CCTTGCCTTTTAGCTTTGACCAGGGTTGAGTCCTAGCTTGCTTGGGGCTTTATTCTGCATTAGTAGGAATCTTTGTTTTA ATAGGTTGTGAGGCATCTAAAATGCTGAAGCTTAAGGAAACTGTGTGCAAATTTCATAGTGTCGTCACTTGAGTTGTGTG TTTTCTATGCATGTCGGAAAGCATAACTTGTGATATGTAGTTATCTATTTAATGATTCAGGACTTATGAATGTAGGTTAT TTTGTATGACTTGCTGTATTGTATTTGTACGCATTTCTGTGTGTTAATACTTTATAAGTAATAACTGAATGAACGAGAAG TTCAATCTGTCTTGTCTGGGTCAGAGTGTTGTAACACTTGGAATGTTGCAAACTTATATCTGGGTGCAAGGATATATTAT TGGTAATTAATTGCCTTTTTTATAGCTATATGAGCACAGCATGACTGATTCTGGGTGTTTGGTGATTTAATTTACAGTAA ATTTCAAATATAGTGATTGTGATTTGTAATTTCCTATCTAGATATGGGAATTACAGGATAATGCCACTTTGCTTGAAACA TAATTTATCTGTTCTCTAGGGGTAAAGCTTTTGAAAGAAATAGTAAAAATGAATCTCCTAGTAATGCTGATTTTCTGGAA AGAAGGCAAAGAACTACTTTGCTCTGTTTACAATCTGTTCTTCAACCTGGGCTAATATTGATGCAGCATCTGATTTTGCA TTGGTTGACTTAATACTGCACACCTAGAAGGTGTAAACATTGCTGGTATCTAAATTTTATCTTAGATAGAAGTCCTCTGA GGCGAAATTGTCTTCAAAGTGAGCAAAGAAGGATGTATTCACCCTTGATTTAATTCAAAGTGCATCCGCAGGAGTTTTAT CCCCTTTAATGAGCAACTTATTTGTCAGGATACATTTTGTTTTCAGTTATTGGTAAGATGGTCTTTTTCTTCCAGCGGGG TGGTTATTGGGCATGAACATAACATATGGTGTTTTAGATTCTTGCTCTTAACATTTCTCCCAAAATAGGGAAGCTAGATG GGAGTGTGTATCCTGCAGGATTAATGATCTTTTGTTTCCAATAAATTATTGAACTGAGTCTGAGATGGGCATCTTGCTTT TCCACTGTGATAAGTATAGCTGTGCTAATACAACAATCCTCTTGGTGTCCTAGATTGGATCAAACCCAACTGATCCATTT TGGATGATCTTGCACCATACATTCAATTTTGGTGCTTTGAGATTATCTCCTTAGTTGTATACACATTGTAATTAGTACTA GTAAATATAAGTTTAGGTTATATTCACCTAAGAAGTGATAACATTATCATAAATGATTGACTAACACTTCTGTCTTGCTA GGTTCGGCTTGGATGGCACTTTCAAGATCTTTCATTGACTACTGCATATGGGGATGGGACAACCTACCACGGACTGTTCT TATGTACTATTCTAATTTCATATCTTCCCCTGAAGGATACTTCCACACAGTTATTTGTAATGCACAAGAGTTCAGGAACA CAACTGTGAATAGTGATCTACATTTCATTTCTTGGGACAATCCTCCCAAGCAACATCCTCACTACCTTATACTTGCTGAC ATGAAAAGCATGGTTGATAGCAACGCTCCATTTGCAAGGAAATTCCACAGAGAAGATCCAGTATTGGACCAAATTGATTC TGAACTATTATCCAGAGGTGCTGGAATGCCTGTTCCTGGAGGTTGGTGCATAGGAAGCAGGGAGAATGGCACTGATCCCT GCTCTGTGATCGGTAACACCACAGTCCTGAGGCCCAGCCAAGGTTCGAAAAGGCTCGAAACATTAATCAGCTCGTTGCTG TCAAATGAAAAGTTCCGGCCTCGACAATGCAAATGA
CDS sequence (LotjaGi2g1v0255100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTAAGAAGCAAGATGTGTTCTGGATTACACAGAAGAGGAGTAGGCCAACAGCTTTCAAGCTTTTCACAGGTTCGGC TTGGATGGCACTTTCAAGATCTTTCATTGACTACTGCATATGGGGATGGGACAACCTACCACGGACTGTTCTTATGTACT ATTCTAATTTCATATCTTCCCCTGAAGGATACTTCCACACAGTTATTTGTAATGCACAAGAGTTCAGGAACACAACTGTG AATAGTGATCTACATTTCATTTCTTGGGACAATCCTCCCAAGCAACATCCTCACTACCTTATACTTGCTGACATGAAAAG CATGGTTGATAGCAACGCTCCATTTGCAAGGAAATTCCACAGAGAAGATCCAGTATTGGACCAAATTGATTCTGAACTAT TATCCAGAGGTGCTGGAATGCCTGTTCCTGGAGGTTGGTGCATAGGAAGCAGGGAGAATGGCACTGATCCCTGCTCTGTG ATCGGTAACACCACAGTCCTGAGGCCCAGCCAAGGTTCGAAAAGGCTCGAAACATTAATCAGCTCGTTGCTGTCAAATGA AAAGTTCCGGCCTCGACAATGCAAATGA
Protein sequence (LotjaGi2g1v0255100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKKQDVFWITQKRSRPTAFKLFTGSAWMALSRSFIDYCIWGWDNLPRTVLMYYSNFISSPEGYFHTVICNAQEFRNTTV NSDLHFISWDNPPKQHPHYLILADMKSMVDSNAPFARKFHREDPVLDQIDSELLSRGAGMPVPGGWCIGSRENGTDPCSV IGNTTVLRPSQGSKRLETLISSLLSNEKFRPRQCK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 194 | 194 | 6.4E-122 | – | |
| PANTHER | 1 | 194 | 194 | 6.4E-122 | – | |
| Pfam | 13 | 108 | 96 | 1.0E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi2g1v0255100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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