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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0267800 |
| Transcript ID | LotjaGi2g1v0267800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | PI-PLC X domain-containing protein family; TAIR: AT1G13680.1 PLC-like phosphodiesterases superfamily protein; Swiss-Prot: sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130; TrEMBL-Plants: tr|A0A151RVR7|A0A151RVR7_CAJCA PI-PLC X domain-containing protein family; Found in the gene: LotjaGi2g1v0267800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:73718398..73720313) extracted from Lotus japonicus Gifu genome v1.2.
ACAGATCAATTCAAGCTCATAGTAAGATTCCCATTTCTCCTTAGTCTTTGTCCAATTTCACAAGAAACACACATAGATGA AATTTCTCATGTGTGAAACTTAATGCCATCGTTAACTCCCAGGAAACTGTCACAATAATCCACACACACATAGGTGGAAA TAATCTGATGAGCATTGCATTATTTCAAGACCAAAAGAGAAAGATATATGCATTATTTAACATTGGTTCTTTTTTTTTTT CTTGTTAGAATAACTCCCTACCATTCAACAAATATGCATTTTTAACAACACACAATGCTTTCGCTATTGATGGAGAACCA TCTCACACAGGAGTACCTCGACTGACCATCATCAACCAAGAAGACAGTGTAACCCAGCAGCTGAAAGTATGGCATTCAGT ACTAAACTACTAATATCCATAGCCTATGGTTTTTTTATGTTCTGTTTCTTACAATATACACAATTTTCTTTCATCAATGG TTTATTTGTAGAACGGAGTTCGGGGACTAATGCTGGACACATACGATTATGATGGAGATGTGTGGTTATGCCATTCCTTT CAAGGCAAGTGCCATGACTACACAGCTTTTGTAAGTTAAAATCACCCTCCCAGCACTGTTTCTTGTTTGACCTCAGCTTC CCCAAACTTGTTAACGAACACTAATGACTAATGAGTAGCTTAATTTCCTATGAACAAGTATCCTAACTTTGTAGCTTATC GGAAAAAAAAGTATCCTAACTTTGTAATCAACAACAGGAACCAGCTATTGATACACTGAAGGAAATTGCAGCTTTTCTAT CAGCCAATCCAACAGAAATCGTCACACTCATATTGGAAGATTACGTTAGAACACCAAAAGGGTTAACAAAGGTCTTCACT GATGCTGGTTTGATGAAGTTTTGGTTCCCTGTGACAAGAATGCCAAAAAATGGAGGAGACTGGCCTCTAGTGAGTGATAT GGTTGCCAAAAACCAAAGATTAGTAGTGTTCACTTCAGTGAGATCCAAGGAACAAAGTGAAGGCATTGCTTACCAGTGGA ACTACATGGTTGAAAATCAATGTAAGAAAACACCAAACACTAGTAGCATTTTTGGATTAGCTTCTCGAATTAATTATGGA GCCTAGCTCCTCACAGCTTCTACTTAGAATTGATTTTGCCTTTAAAATCAATTGTAGAATGATTTACCTTCTACAATTGA TTCTAAAGCCAGCGTCAATTTTGGAGAGAAGCTATTATGAGTGGTGTCTGATGGAGAAAAAATAAATTTAATCCAAACAT GCTATAAAGCTCTTTTATTCTTGACACAAGAATCATTGGTTCTTGCTTCCTTTGTCAAAATTTCATCTTGGTGATCAAAC TCTGCAGATGGGGATGATGGAATGAAAGCAGGAAGGTGTCCAAACAGGGCAGAATCATCTCCTCTGGATGACAAAAGCAA GTCCTTAGTATTGATAAACTACTTTCGAAGCCCACCACTTAAGCTGGTCACATGTACTGATCATTCTAAAGCTCTCATTA ACATGCTACAAACATGTCACAATGCTGCTGGCAACCGGTGGGCTAATTTTGTTACTGTTGATTATTACAAGGTAGAAATT TTGTGCATATTTTAACTTTTGTTGCTATATAAACCATCAAGTTTGAACTTGTTTATCCTAATATGAACTTTTACTATTTG GGGATCAATTTATAGAGGAGTGATGGAGGAGGATCTTTTCAAGCAGTGGACACTCTCAACGGGAGGCTCTTGTGCGGGTG TAATGATGTCCATGCATGTCTGGTAAATAAATTTGCATTCACTCTTGCTTTTCAACAACACTAGTATTTAATACATAACA CTTCCAAGTAACAAAAATTAAACTCTGATTGTTCCATTTTCAGCCTGGATCTACTCCACAAGCTTGCTCAGCATAG
CDS sequence (LotjaGi2g1v0267800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCATTAATAACTCCCTACCATTCAACAAATATGCATTTTTAACAACACACAATGCTTTCGCTATTGATGGAGAACC ATCTCACACAGGAGTACCTCGACTGACCATCATCAACCAAGAAGACAGTGTAACCCAGCAGCTGAAAAACGGAGTTCGGG GACTAATGCTGGACACATACGATTATGATGGAGATGTGTGGTTATGCCATTCCTTTCAAGGCAAGTGCCATGACTACACA GCTTTTGAACCAGCTATTGATACACTGAAGGAAATTGCAGCTTTTCTATCAGCCAATCCAACAGAAATCGTCACACTCAT ATTGGAAGATTACGTTAGAACACCAAAAGGGTTAACAAAGGTCTTCACTGATGCTGGTTTGATGAAGTTTTGGTTCCCTG TGACAAGAATGCCAAAAAATGGAGGAGACTGGCCTCTAGTGAGTGATATGGTTGCCAAAAACCAAAGATTAGTAGTGTTC ACTTCAGTGAGATCCAAGGAACAAAGTGAAGGCATTGCTTACCAGTGGAACTACATGGTTGAAAATCAATATGGGGATGA TGGAATGAAAGCAGGAAGGTGTCCAAACAGGGCAGAATCATCTCCTCTGGATGACAAAAGCAAGTCCTTAGTATTGATAA ACTACTTTCGAAGCCCACCACTTAAGCTGGTCACATGTACTGATCATTCTAAAGCTCTCATTAACATGCTACAAACATGT CACAATGCTGCTGGCAACCGGTGGGCTAATTTTGTTACTGTTGATTATTACAAGAGGAGTGATGGAGGAGGATCTTTTCA AGCAGTGGACACTCTCAACGGGAGGCTCTTGTGCGGGTGTAATGATGTCCATGCATGTCTGCCTGGATCTACTCCACAAG CTTGCTCAGCATAG
Protein sequence (LotjaGi2g1v0267800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSINNSLPFNKYAFLTTHNAFAIDGEPSHTGVPRLTIINQEDSVTQQLKNGVRGLMLDTYDYDGDVWLCHSFQGKCHDYT AFEPAIDTLKEIAAFLSANPTEIVTLILEDYVRTPKGLTKVFTDAGLMKFWFPVTRMPKNGGDWPLVSDMVAKNQRLVVF TSVRSKEQSEGIAYQWNYMVENQYGDDGMKAGRCPNRAESSPLDDKSKSLVLINYFRSPPLKLVTCTDHSKALINMLQTC HNAAGNRWANFVTVDYYKRSDGGGSFQAVDTLNGRLLCGCNDVHACLPGSTPQACSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 273 | 273 | 3.73912E-109 | – | |
| Gene3D | 2 | 261 | 260 | 1.1E-10 | ||
| PANTHER | 3 | 295 | 293 | 3.3E-175 | – | |
| PANTHER | 3 | 295 | 293 | 3.3E-175 | – | |
| SUPERFAMILY | 4 | 276 | 273 | 1.26E-51 | ||
| ProSiteProfiles | 8 | 116 | 109 | 11.93 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. | ||
| Molecular function | Phosphoric diester hydrolase activity | Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group. |
Expression pattern of LotjaGi2g1v0267800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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