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LotjaGi2g1v0269000.2

Overview

Field Value
Gene ID LotjaGi2g1v0269000
Transcript ID LotjaGi2g1v0269000.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description tRNA (Guanine(26)-N(2))-dimethyltransferase; TAIR: AT5G15810.1 tRNA (guanine(26)-N(2))-dimethyltransferase; Swiss-Prot: sp|Q9LFU5|TRM1_ARATH Probable tRNA (guanine(26)-N(2))-dimethyltransferase 1; TrEMBL-Plants: tr|A0A151RGF2|A0A151RGF2_CAJCA Putative N(2),N(2)-dimethylguanosine tRNA methyltransferase 2; Found in the gene: LotjaGi2g1v0269000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:73835117..73840797) extracted from Lotus japonicus Gifu genome v1.2.

TTTTCCTCAATTTAATATTTCAGGTAATTAAGAAATAATAAAAAAATTCGATTGAACTCAGAATCGCAATTTAGGGTTTA AGAGGAAAAAAAAAACCAGGCCAAAGACAAGTTGAAAAACTAGTGGTAGGGTTTTCAGTTACCTTGTTTGAAAGAGCCAT GTATAAAACCGGTGTGTATGTTGGTTACAGGGCATAGTGCTTCGAAACTGCTACTGAAGCTTGTTGCAGCAAGGACAATC GGAACGAACCCTAATCCTCTCTTCAAATCGTGCTCTTTCTTCTGTACCAGAACGGAGGAGGAGAAGGAGAAGACCCTGAA TTTGTTTTTGCATGATATAGGCACAAAAATGTCTATGGATCTCAATGATTTTAAGATCATTAAGGAAGGTGAAGCTGAGA TTCTTATGCATGCTGAGAATGAAGTATTCTATAACAAAGCTCAGGTACAAAAAAAATCAATTTTTTACTATGTTTTTTCC GTTTTGAAATCAGGGTTGCGAAGAAAAATCAATTTTTTTTCAATCTGAGTTTTGGTTCATGGTAGAAAAAGTTAGCTGGC CAAGAAAAATTAAATTTTGAATAGTGGGGTGGTCAGAACTTTTGTAAATTGTCTTTGATAGGGTTTATTGTTGATTGTTT ATGCTTGTCTGTTGAATTATGCAGGCCTTGTATTTATCAGGTTGATATCAGTATGTTTCCGGTTAATGTAGTTTCGGGGT TTATTTTCTTGGCTGTGTAAGATAGACTGATCCCATTTTCCTTTTATTAGGTTAATAACAGGGATATGTCAATTGCTGTT TTGAGAACTTTTATATCGAAACGGAAGCAAGAGCATGAAGCAAATTTGTCCAAGAGATCGAAAAAGACACAAAAACCATC TGAAAATGGTTCTTCTGAATTAGTTACGGAGGAAGTATTTCACGAAGCTGCACCAGAAGATCATAAGTCTAATGGGGAAT GTGAAATCAAGGAAGAGATATCTCCAGAAGAACCATGCAGTGAAACGGATGGATCAGTTAAGATAACTGAAGAATGTAGA AGTGGAGAAGAACAAATTGATCTTTTGGAAGGAAAAGGACGGAAGGAGCTGAAGCCACCAATAGTTCTTGAGGTTTTCCA TGCTTTTTAGCTTTCATTAGCATAACTCTTTAATGTCATGAAGGCATCACTATCACCATTGTCCTTCCATATCGGATATA AATATTTTTCTTTGCAATTCAAATCCAGTTCCGGTATCACATGTATGATTGCTCTTTTACTTTCCTGCATACAGGCCTTG TCTGCTTCTGGGTTAAGGGCTCTCAGATATGCTCGGGAAATAGAAGGGATTGGTCAGGTTGTTGCCCTGGACAATGATGC AGGTGCTTCAAGGATTTTTCAGTTTATATTGTCTTCAAATTTTGTTCTGTGGTTTTAAAACATAAAAAACTCTGCACCTT TGTGGTTTGTCTACTCTTAGGATACTTATAGTTGCTACCTTTTGTTTGAGATTAGTGCTTATTCTTTGTTTATAAGCATA TGAGTCTGCATACATAGTACTGATTTTTGCTTCTGGCAGCTTCTGTCGAAGCTTGCAGAAGGAACATCAAATTCAATGGT TCAGTTGCAGTCTCAAAAGTGGAGTCTCATCTTGCTGATGCTCGTGTATACATGCTAACCCACCCTAATGAGTTTGATGT GGTAAGTAGATGCCACTGTTATGCACTTGTATTCACCTCTTAGTCTAAGCAACATACATTTTTCATTGTCTTCACATGTT TTGTTTTTCAGGTTGATCTTGATCCTTATGGTTCTCCTTCTGTGTTTCTGGATTCGGCAGTTCAATCTGTTGCTGATGGA GGCATGCTTATGTGTACTGCAACAGATATGGCTGTACTCTGTGGGGGAAATGGGGAGGTCTGCTATTCAAAGTAATGCTC TTATTCACTATGAACTTTCATTCCACAATTATTTATTCGGTGCACTGAACTTCTTACAACTGATATTCATACTAGATATG GATCATATGCCCTGAAAGGGCAATATTGCCATGAAATGGCCTTGAGGATCCTTCTTGCTTCCATTGAGGTATGTATATAC TTTTGAAGCTCTTTTCCATCGAATGAGATATCATTAAATTAGTTTCAATTGATAGAAATCAAGATTTAGTTGGATTGTCA TATTAGAAATTGGGAGGCCTATACTCAACCACAAAAGCTAGCTCAAGAGTTGAGGTTTGCACTACCCTTATAAAGCTTAT CTTGGCTCTATCTCTAGCCAATGTGGGACTTCTAACACACCCCCTCACGTCCAGGATTGAACAGACTGGAACGTGGGATC AACAACGGGTGGCCCAAATATGGGTGATCTCCACAACAAATGGATCTAGGATAGGCTCTGATACCATAATAGGAAAACCA GAGAAAGAGAAAAAGATTTGCATATGAAATATTCACTATGAATTGTTAACCGATACAATGAGGATTGAATCCTTATATAG GATTGAAGAAGCTTGCTCTACAAGCTAAACTAACAGCTAAGCTAACTCTAACTGAATGGTAACAACCTCTAACAGAATTG ACAGCTGTTCCTCTAACAGAATTGACAGCTGTTCAAAACAGAATTAACAACTGTGTCCAGCTGGCATTCCAGCTGGCACA CACACACTAAGCATAACCAATATTTTCATATCACCTATATACTCTAATAGTTTCCTTGTACATAGTTATATAAATATTTT GAAATTCCACATTGTTATTGGGTTATGTGTTCTTTGGTATCTAGCAACTTTTATGCCGATATCATGATTTTTTTTAGAGA ATGTCTGGAACAAATAGTAGTAGTTCCTTTTCCTACACAATGTGTAGTGGATGTTGCTATAATTGTTGCATTTTCATTTT GCATCTCATTGTCTGTTGTCGTCTTGTATCGTAGAAGTTTCTGAAAGGGAGAATTCCAAAAAAGTGAACATAGGTTCTAA TATTTTTATGATATGTTAATTCCATCAATAAAACAGGTGACCGATATATACCTTGCAAGAATATTAATATTTATGGGAGG TTCCAAGAGATTTAGTGCTTAAGTGATCACTTAGAAATCAAGGAGTGTCATTGATTGGAAAATCATTAGTTTGGATTGGA ATTGTATACATGCATATGTATATCGAACTATGAGGCTGTTTGGATCTTGATTTTTCCAATCAACTGATGTAACTTCTCAT GTAATAACTTGTCAGTTTGACAAATCACAAAATATGGAACATATATGTTGTTTTGTTCTATTCTATTCCTGTTGCTTGTG TTAGGTATGTACCACTAGCTATGTAATAGCTTGATTGAGAGTATTTGCGCAGACTAGTCATGTCGGTAATGGAAAACTTT GGAATTGTTTGATTGTCAGTCACTGCACCACTTTTCAGACAAGGTGATTTTTTGTGAAATAAACCTAGTAGAGGGGATTT AAGCGCACATCAGTTTTTAAGCAATAGCCAACAGTTTCTAGTGCAAACTGTATATAAAGACAAAATACCCTGTACTTCCT GGATAAATGTCAGGTTGCATTAGATACTCTGGCAGCACCTTTATTTGTTAATACCTAAGCTTTGTCTTCTCATGTTATTT GGATGCCAAGGTTGATGTTAAATAACAAAAAACATAATGACCCAAATATGTTGTGTTAAATTTTGGACCAATTGAATATC TATAAATTTTTCAATAAATATAATGTTTGACTCTTCATATAATGCAGAGTCATGCTAATCGTTACAAGCGGCATATTGTT CCTGTGCTATCTGTTCGAATGGACTTCTATATTCGTGTTTTTGTTCGTATATACACGTAAGTCTTAGTTTCTCTGTCATG TATTTTAGAAAATATTGTGTGTTTATGTCTTTATGAAATATTGATTCCATAGCATTTCGTCATTTTATTTGCTTCCAACT GAAGGATGAATTCCTTGGTTGCAGGTCTGCTAATGCTATGAAAAGCACTCCCTTGAAGCTTTCATATGTTTATCAGTGCA CTGGTTGTGATTCTTTCCACCTACAGCCCCTAGGAAGGAGCATTTCCAAGGTGTGTGTATATGTTGTTGTTTGTTTTATA AGCTCCATATCAACAACACAGTACATTTAAATTCATATTTGTTTGTATATATTAGAAAGAAGCCAATTAGAAGACCAAAT AACCCATTCTGATGATCCACTATATTCTACATTGGTTTGGGGGTTTGGGTTTTATGCTCTTTGGCGTTGCATATACCAAA GGGCTATTATGTTGTGCTCCTTGAAGCCTGCATGGCCATTTATGTGAAGTGCTTTATTTTTATTGACTAGTCTTGAATGG GGAACTTATTTTCTTTTTTACTTTCTTCAGAATACTAGCGTCAGACATTTGCCTGCATATGGTCCTGTTGTTCCTCAAGA GTGCAATGATTGTGGGAAAAAGTTCAATATGGGTGGCCCTATATGGTCTGCTCCTATACACGACCAAGAGTGGGTTGCTT CTATTCTAGCAGATGTGAAACGAATGAAGGACAGCTACCCCGCATATGATCGCATATCAGCTGTGTTGACTACAATATCA GAGGTATGTTTTCATCATTCATGTCTAGTTTTTAACACGACACACATCACATTTATGGTATGATTCAAATGTGTAGTGTT CTGGCATCCAATCTTCTAATATTCAATGGATTTATTCTTTGCAGGAATTGCCAGATGTTCCTCTGTTTTTAAGTCTGCAC AGCCTCTGTTCAACCCTTAAATGCACTTCTCCATCAGCAATTATTTTTCGTTCGGCTGTGATCAATGCAGGATATCGTAT ATCTGGAACTCATGTTTGTCCACTGGGGCTTAAATCAGACGCACCCATGGATGTTATTTGGGATATAATGCGCTGCTGGG TAAGTGGTTCAATGCTGGTCCTCAGTTGATTAAGACTAGTTCATTTATATGTTTGTTTTGTTGGTTTCTGCGGAATTGAT ATTTTTTTTTTTGGTGTTTTTGTGCCTATTTTTTGGGGCGGGCGGGTGTTGTCAATTCAATAATGCTTGAGTAGTCTGGG GAATAAAACAATAAGTTATTTGTATTTTTATTCTGTTCACATATTTCACAGGTAAAAAATCATCCTGTAAAAGCTCAGCC AGCAGATAAATCAGGAAGTGTCATACTTGCAAAGGAACCTGTTCTGCAGGTATATTTTGCCATTCAACTTTTATTCTCAT GCAAAATTCAGGGTTATTCCCCCTTCTCCTTAATCTATGCAAATTTTGGATTCTACTTTAAGAAGCACGTGCATGAAGTT TTCACAGATTTGTGGTGGGAGAGGTAGAGTAGTAATGGTGGCTAAAAGCTTTGTTGTTTGCGTTCTTTTTAGGCTAATTT TGCTAGAGCGGTAGCATCTCTTAGCAAGGCACAAGCTAAGAAAGTTGCCCGGTTTTTGCCAAATCCTGAAAAACACTGGG GGCCAAAAGTAAGGGCTGGACGTCAGATTACTAGTAAGCATGTCTCTCTCTTGGGTGAAGCCGCAATTAATGGAGTTCTC AACCAGAAAGATAATGAAGAACCTGAAAGTAAGAGGCAGAAGAAGTGATGACAATATCATCTTATCTCATAATTGAGGTT CTTGAAATTATTTCTCATCAATTTAGTGACCCTGAAATTCTATTTTTTCGTTACTAAAGGAAGTCCATTTGTTTCCATTA A
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0269000.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCTATGGATCTCAATGATTTTAAGATCATTAAGGAAGGTGAAGCTGAGATTCTTATGCATGCTGAGAATGAAGTATT CTATAACAAAGCTCAGGTTAATAACAGGGATATGTCAATTGCTGTTTTGAGAACTTTTATATCGAAACGGAAGCAAGAGC ATGAAGCAAATTTGTCCAAGAGATCGAAAAAGACACAAAAACCATCTGAAAATGGTTCTTCTGAATTAGTTACGGAGGAA GTATTTCACGAAGCTGCACCAGAAGATCATAAGTCTAATGGGGAATGTGAAATCAAGGAAGAGATATCTCCAGAAGAACC ATGCAGTGAAACGGATGGATCAGTTAAGATAACTGAAGAATGTAGAAGTGGAGAAGAACAAATTGATCTTTTGGAAGGAA AAGGACGGAAGGAGCTGAAGCCACCAATAGTTCTTGAGGCCTTGTCTGCTTCTGGGTTAAGGGCTCTCAGATATGCTCGG GAAATAGAAGGGATTGGTCAGGTTGTTGCCCTGGACAATGATGCAGCTTCTGTCGAAGCTTGCAGAAGGAACATCAAATT CAATGGTTCAGTTGCAGTCTCAAAAGTGGAGTCTCATCTTGCTGATGCTCGTGTATACATGCTAACCCACCCTAATGAGT TTGATGTGGTTGATCTTGATCCTTATGGTTCTCCTTCTGTGTTTCTGGATTCGGCAGTTCAATCTGTTGCTGATGGAGGC ATGCTTATGTGTACTGCAACAGATATGGCTGTACTCTGTGGGGGAAATGGGGAGGTCTGCTATTCAAAATATGGATCATA TGCCCTGAAAGGGCAATATTGCCATGAAATGGCCTTGAGGATCCTTCTTGCTTCCATTGAGAGTCATGCTAATCGTTACA AGCGGCATATTGTTCCTGTGCTATCTGTTCGAATGGACTTCTATATTCGTGTTTTTGTTCGTATATACACGTCTGCTAAT GCTATGAAAAGCACTCCCTTGAAGCTTTCATATGTTTATCAGTGCACTGGTTGTGATTCTTTCCACCTACAGCCCCTAGG AAGGAGCATTTCCAAGAATACTAGCGTCAGACATTTGCCTGCATATGGTCCTGTTGTTCCTCAAGAGTGCAATGATTGTG GGAAAAAGTTCAATATGGGTGGCCCTATATGGTCTGCTCCTATACACGACCAAGAGTGGGTTGCTTCTATTCTAGCAGAT GTGAAACGAATGAAGGACAGCTACCCCGCATATGATCGCATATCAGCTGTGTTGACTACAATATCAGAGGAATTGCCAGA TGTTCCTCTGTTTTTAAGTCTGCACAGCCTCTGTTCAACCCTTAAATGCACTTCTCCATCAGCAATTATTTTTCGTTCGG CTGTGATCAATGCAGGATATCGTATATCTGGAACTCATGTTTGTCCACTGGGGCTTAAATCAGACGCACCCATGGATGTT ATTTGGGATATAATGCGCTGCTGGGTAAAAAATCATCCTGTAAAAGCTCAGCCAGCAGATAAATCAGGAAGTGTCATACT TGCAAAGGAACCTGTTCTGCAGGCTAATTTTGCTAGAGCGGTAGCATCTCTTAGCAAGGCACAAGCTAAGAAAGTTGCCC GGTTTTTGCCAAATCCTGAAAAACACTGGGGGCCAAAAGTAAGGGCTGGACGTCAGATTACTAGTAAGCATGTCTCTCTC TTGGGTGAAGCCGCAATTAATGGAGTTCTCAACCAGAAAGATAATGAAGAACCTGAAAGTAAGAGGCAGAAGAAGAAGTC CATTTGTTTCCATTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0269000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSMDLNDFKIIKEGEAEILMHAENEVFYNKAQVNNRDMSIAVLRTFISKRKQEHEANLSKRSKKTQKPSENGSSELVTEE VFHEAAPEDHKSNGECEIKEEISPEEPCSETDGSVKITEECRSGEEQIDLLEGKGRKELKPPIVLEALSASGLRALRYAR EIEGIGQVVALDNDAASVEACRRNIKFNGSVAVSKVESHLADARVYMLTHPNEFDVVDLDPYGSPSVFLDSAVQSVADGG MLMCTATDMAVLCGGNGEVCYSKYGSYALKGQYCHEMALRILLASIESHANRYKRHIVPVLSVRMDFYIRVFVRIYTSAN AMKSTPLKLSYVYQCTGCDSFHLQPLGRSISKNTSVRHLPAYGPVVPQECNDCGKKFNMGGPIWSAPIHDQEWVASILAD VKRMKDSYPAYDRISAVLTTISEELPDVPLFLSLHSLCSTLKCTSPSAIIFRSAVINAGYRISGTHVCPLGLKSDAPMDV IWDIMRCWVKNHPVKAQPADKSGSVILAKEPVLQANFARAVASLSKAQAKKVARFLPNPEKHWGPKVRAGRQITSKHVSL LGEAAINGVLNQKDNEEPESKRQKKKSICFH
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10631:SF12
3 576 574 0.0 –
PANTHER
PTHR10631
3 576 574 0.0
IPR002905
SUPERFAMILY
SSF53335
9 487 479 5.45E-108
IPR029063
ProSiteProfiles
PS51626
9 485 477 137.539
IPR002905
TIGRFAM
TIGR00308
11 487 477 2.1E-94
IPR002905
Pfam
PF02005
12 486 475 2.8E-117
IPR002905
MobiDBLite
mobidb-lite
53 116 64 - –
MobiDBLite
mobidb-lite
53 68 16 - –
MobiDBLite
mobidb-lite
81 116 36 - –
CDD
cd02440
144 245 102 1.10149E-4 –
Gene3D
G3DSA:3.30.56.70
429 487 59 8.2E-17
IPR042296

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of
GO:0004809
Molecular function TRNA (guanine-N2-)-methyltransferase activity Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing guanine = S-adenosyl-L-homocysteine + tRNA containing N2-methylguanine.
Subterm of
GO:0008033
Biological process TRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0269000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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