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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0270500 |
| Transcript ID | LotjaGi2g1v0270500.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MADS-box transcription factor; TAIR: AT5G60910.1 AGAMOUS-like 8; Swiss-Prot: sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8; TrEMBL-Plants: tr|I3SRR9|I3SRR9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0270500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74130489..74141073) extracted from Lotus japonicus Gifu genome v1.2.
TGCACACCACAAAAATAGAAAGATACCCATGTTGTAAAACACGCCCTTTGCTTTGCTTTGATTTGCTTCTTCAGATTTCG TGCTTGCTAGCTTTTCCCTCAGGTGAATATGAACACTACAACTCTCTCTAGGGCTTATTATTGATCTCTTCTTCTTCTTC TTCTCTTTATTTCAATTGAAAAGGTAAATTAAGTTGTAGAAAAGTTCATCGATGGGGAGAGGAAGGGTTCAGTTGAAGCA GATCGAGAACAAAACTAGTCGGCAAGTGACGTTTTCAAAGAGGAGAATGGGGCTGCGAAAGAAAGCCCATGAAATCTCTG TGCTCTGTGATGCTCAAGTAGCATTGCTTGTCTTCAACACCAAAGGAAGACTTTATGAGTTTTCATCTGAATCCAGGTAT ATCATATCATATGCACTTACAACCCCTTCGTTATTTGCACCACCTTTGATTGACTTTCCACGTCGTCGTCTATATTTGTT TTCTCAACTTTGTTATAATTAATTAGATTAATGTTTATACTCACAATTTAAATCAATCCACACTGGACGGTTCCTGAATG ATAACTCAAATAATAAAAATTGATAAAAATATGGATTGAAAAGTGAGAGGTTCCAAGATCAATCCTACATTGTACTTGCA TATATATATATAGATGAAGTTATTGTCTTTTCTAATTTTTTATTATCCTTCGTTAATTTGTTGCTTCTATTCAAGTTACC TACTAAAATCTTCTATCTTTTATATCTTTTATATATATATATATATATATATATATATATAAAACACACTTGAGTTTAAC ATTAAATAAATAAGAAAAACTCAAGTATTGCATTGTATTAAAAATGTTCTAATAAACAATCATAATTTTCTTTGAAATAA ATATATTAATCAATAAAATAAAAAACCGGAAAAAAATTGTATTCCCAAAATAGTATTTATTAACAAATAATTTAGACAAA TAGTTTTAAAATTAAAATTTTCTATTTATATGTCAAGGAAATTTGAGAATTATTACATTAAAGTTATTAAACCATAAAAC TCTCATATCTCTGTATTAAAACACATTAAGAAATACTAATTTCTCTTACTAAAAAACACAGTATATTACAAAATAATTGA AAACCGAAAAGAATTGTATATTCAAAAACCATTCAACTAATTACATTAAATAACAACATTTATGAACTTAAAATTTAATT TTTTAAAAAAACTAAACTCTTCTTGAGTTTTTTCATTTGAAAATATTAAAAATTAAAATTATTTAATAAAATAATATTTT TAATAAATAATTTAGATAAAAAAGTTTCAAAATTAAAAAATGCTGCTAAAAGTTATTTAATATGAATTATAACACATATG CGCATTTTCAAAAAAAATATTTAAATATATTTTTTATCTATGATATATTATTAAAAATCACTCGAGGAATCACAATAGCG AAAAATAATAATGACCCATGTTGTATAAATTTTTGTTATGAGAAACTTATCCACTTAACATGATCGTAGAACCTCGAGAG ATTAGTGTCATGGCTATCATTTGTGAGGAAATATTTGGAAACCAAATAAGTTGAATAAATGACTAGATAATATTTTATGC TATTTAATTTATAACTTATTATAATTCAAAAAGTTAAAATTAGTTTATTTCTCATGGTCTTGATAGGTCACAATAAATGA CTTTCCCGATTAAAAGTAATAAAAATTATATTAAAACTTATTTCATGATATTAAACACTTATTACTTAACATTTTTTACC TAATTTAAATATTTCAAATTAACTTAATAATTTTTCATATTATTAAATAAAAAAAATTAAATTGTTAAAATTATTTCTAT GATAATAATTAAATTTCAATATTAAGTTTGAGTAATATTAATTATTTACACGAAAAAACTCTTATATTTATTGAAATTTC TTAACACAACTTTTTTATATTTATAATTAAAAATATTTTAACTTTTATTTATTTAAACCATAATAATTTTATCATCTTAT TCCCGTTTAGTTATTACTTCTTTATGTTAAAACTCTTGGCACAATTGAAGGGTTCAATTATGAACAGTGGCGGAGCCAGA AATTTTTGGAAGTCTGGGCAAGATTAAGTTTAAGACTAATTAGTCTACACTTGGCGTTTAACCCAGAGTTTTAAATTGCG GGTTGCAGGTGTTTGAATTGAGATAAAATGAGTATGAAATAGAAGGAAAGAAAACAAATTTTTTATAAAAAAATAAATAA GTGAACATAGTGGCCCAAACACTATAACTTGTGTATAAAAAAAATGCAAAAAAACAATTGACGGCTGGCCCATTAGCATT TCATGACCTAAATGACTAAAGGTCAAGACATGTTTTGTCTTCAACCTTTTTCTTTTCAATTGGCAATGCTACATGCAGCT TTTGCATACCTTTTCTATGTCCTCTACATGCGTCCCTTGTCATGGCCACCGTGAGCCTCGCGGTGGATCCGCCCTCTCCG CCACTCTTTCTCTCAGCCTCACAATCACTCTCTGTCTCTCTCCACAATTTCCAAATTCAACTGTGAATCTGCCCCTGCCC TTCTGGTTCTCACCCACCCACAGCTTCTTCGCTCACCGACCGAAGAATTATGTGCAGAATTTTGTGTTAGGAACTTGACA TACAAAGCATCTTAGAAATCTGCATGCATTTATGTTTTTTATTTTAATTTGTGTATTAATTAATTGTTCCTATTTACATG TGAAATAGCATCGAAAACGTGTTGGAACGATATGAGAGACATACCCAAGCAGTGCAACTTGTTGGAGCTGATAAAGAACA ACCGGTATGTACCTCATCGGAACATAGTCTTTATTAACAAAATCAGTATAGTTTTAAAAGTCTGGTATACTCTTAGTTAC GGTTGAAAATAACTTCCGCATTAAATAGATTTATGTTCAAGATAGTTCTAATATATGCGAAGATAATCATTATCTTTGAG CTAATATTTGAGGGAGAGTTAGATCGCCCAATTATTCTAATATGATATTAGAGTCTATTCTAGATCCATTATCTGAAGAC CACCGATAGTGAGAGAGTGTATTGAGATGTCACACATTAACTCGACGGATTTGGTTACCCTCTAAAGTGAGAGTTACATC CACTAATAGTGATTATTTACTTTGAAAAGTCAATAAAACAATTCAGTCAGTCAATGATTATAATGATTTACTTTACTTTA CTTTGGAGAGTTGGACTTAGAGTAAAGAAATGACCAAAATAACTTTTATATTTAGAAAGACAATTCTCATCTCTGAGTGC TTTTGAGGTAGAGTTAAAACTCTTAAATTCTAATAGTTTATTATTTTGAGGAAATTAGTTTGATTCAGTTCTCTGTTAAT AGCTACACGGTTTAGTTAAGCTATCTTTTTTGAAATAGCTGAAGTTTCATTTCAATGATCATGCAATCTTGAGAATAACA TTCTTAAGTTGGGGCAGCAAATAAAATATTTTATACATTATCTACCACAGCCCACAAGAGATTCTTTCTTTTACACTTGC TTTACTAAGCTATCAACAAATGCATTTGCTTCCCCACAACATTAGAAATTTCATTACAATTCACTTCAGCTCTTAAAATA TCACCCTCAATCACCACATTCTGAAATTGAAACTGTTTGCAAAATGAGAGTGCATGTTGAATTGCTGAGATTTCAGCTTC ATATCCCATGAATGACCAATGGGTTTAGAGAACGTGGTGATGAGCTTTATATATATATATATATAGCTTCTAACAAACTA CACTTGTAATTTTAATGAATTCAGTCTCATTCTTTCTTTCCTTCTTCCTCTCACTTTGTTAGCTTCTATCAATTACCTTG TTTCTATATATACATGCCAAAATGCAATTGCATAAAGGGTTATATACTATTTACTGCATGTAGAGAAACTGGTCCTCGGA ATGCTTCAAGCTCACCGGTAGAGTTGAAGTCTTAGAGAAGAGCATAAGGTACACATTTGATATTTCACTGTAAACTTTAT ATATACAATATGGAAGCAGTCTTTAGTGCAACTCTATGCGTTGTTCTTGTTTTAACCTGAAGATCATTATTTCTTCCAAG TGTATTTCAAATCCTTAGTAGCTTTTATGATAACTTGATAATATATATATAGGAACATCGCGGGACATGATCTGGATCCC TTGAACTTGAGAGAGCTTCAGGGTTTGGAGCATCAGCTTGACACAGCTCTAAGGCGCATCCGAACTAGAAAGGTGAAAGC ATATTATCAATTTATTATCTAAAATAAGGTTAATTATGTTTACCATGAATCAAGAAAAATCTAATTTATAAATAAAATTC TGAAATGAGATTGCCTGAATCTTCATCTCCGGTCGTGGTGGTGCTTGGCCTTGAACGGTTTCTCTAACACGACGGGGCAT TCTATCGTTCAAGTCAGTAATGTGCAAATAAAGGATCTTAGAATCTAACAAGAACCCTAAGTTTAGCATAATAGGTAACA CGTGTACAAATGAATGACTATCACCCTTGTTTTCAAAGGCTTGATGTTTTTTAGGACGGTCTTTCAAAGTATTTACGAAG CCTTTAGAAAGTCTTCTGAGATATTAGTTGTCTTTAGGCAGCTTCACTTAGTCGTTTATGAGCAGGTTAGAGTCTTTGTT GCTCGGCTGTGCTAAGACGAGATGTTCTTTAACGAAGTAATCTGATTAGCCTCTACAGTGCTTGCTTAGTCGCAATACCT TTTAATTGACGGGATGTTATTAGACCTTTTAGGTCAACCAGAACACTTGTAAATTGATTTTAACACAAAAAGAGCGTATT ATAATATAACATTTTAATTTATGAGTGTACCAATTGAAGAAAAAATTACCGCTGTAATTAAGTATTTTTTATTCTGAAAA TGACCGACTATTATTATCTTTGGCAGAACACAGTTATGAATGAATCCATCTCAGAGCTGCAGAAAAAGGTTCGTGTGTTT CCTAAGGATTAGCATTGCTCTCTTGAAAGTTCAGATAATTGTTCGTGTATATACTTAAATTAATAAGTTTGGAGTCAATT TCACTGTTATTATTCTCATAAATGCAATAGCTCAGTTAGTTATTGTTAGTTACTGATAATCTGATTAGTTAGTATTTAGC CAACTAATCTCTAATTATCAGTTAGGATCTCAGTTAGTGTTGCTTTCAGTATATATCTTGAGTGTGTAGAACACTCATTA TATCAGAGAAAAAAATCTCTGCTCACTGTATCTTTCTTCAGTTCAATACAATGAGGTTTTCTCTCATTTTCAACTTTCCT TCAAATTGATTTTGGTGGTATCAGAGAAGAATAAGATGATATATGGACAATTTCCTTAGTGGAAGATGATATATTCACTT ATTTTGCTTGATACTCTTCCTTTATCTAATTCTACTTGCTATCATTGCGTTATGGTAGTTCATCTCAAGAAAATGGATCC TCTTCAGACTTCAGAGGAATCATCTGCATGCATTCTGCAATCTCTCTCAAGTAAAATCTTGACCATATAGTAATTTTTAC ATTTAATGGTTAAGATTGGTAAACGAAAAATAGAATTTTCCGTTTGAATGAAATTGGACGAATCAGTATGTCAATTGTCA TTTTTTACACTTGAGAGGATGGACAGAGAATTGCAATTTTATATATTTCTTTGCAATTATTGAGCTATTACATTTGCAAG AAGTACTTATTTTTATTGGAGTTACAGAAAATCATTAACTTTAGGAGTGTTGGATACTTAACAAACTTGATAGACTAATG TTATATATATCTCCTACAAATTCCCCTACATATAAATGGAACCAAAATTAAATGTTTATTACATTTTTAAGATACCAAAT ACATTGATTATTCATTTAATACTTGTTATGTTGTAAGTATTTTGCTATTGAGTAGTCCAAAAGTCAAAGGACAAAACAAG AAGTTGAAACATTATCTTAAAACACTAATTGTATTTCTTGGTGTGTGTTATCTGAGGGTAGATAAATACGAACGAAGGTA ATAGTAAAGATATACTACCATATGTACCTATAAATATTCAAATAGTTTAGGAACTAATATTAGCCAAGGAAATCCAATTA AATGAGTACCATTAGATTGTGTGAGTTACATGTTTTACTACAGCCACTATTCTTATTTATGTGTCTAGAAAAAGAAGAAA GAATTTGTTTCTAATTAAGTGTGTTCACTTATAAATTCAAGATAACATTAACTATCATTTTCTTAATTACCCTACTAGTC CGGTTATGTAATTAGCTTATCACAGGATATCAATGTTTTAAGATCAAGTAATTTAGAGTTTGACCCTGGTTACTCCTAAA TATTTTAATGAAAATGTCGAATTTTAGAATAAGGTAAGTGAGTTTGTGCAATTTTCAAGTTTCACGTTCAATGAACTCTT ACGTAAGGGATCGTGAATATAACATAAATCATTCATCAGTATTCACTCAAAACCTTAATCTTTTGGTATAGTTGGTTCAT GACATGTCTAGCAATAAAAAGGTAAAATAGAAAGTTTTCAAATGACTATTGTTTTGGCATCCGGTAACACACACATTTAC TGAGCACCAATTATTACCGCTAGTCTAAAAGTCGCTAGATATACGACTCTGTGTACACCCAGAGCTAAGGGACTACTATT TCAGTACCATGTTAACAAGGTAGTCAAAAGCTAGCTAGCTTTAGCAATAAAGCGGAGAGGGTTCTAAAGTATAAAGCACT AAAGCGGAACCTAGAGCGTACGCTTTAGTAACTTTTAACATTTATGTATATATTTACACTTATAAATACTTATATGCATA TAAATGGTATAATTAACAAAAATTATTAGGTATGTCATACATAAATTGTAAAGTACCATAACTCATAATTGATAATTCAT AGGAATGTCATATATAGCTACATAAGTCATAAAATACCAATCCAAAACACAATAAAACTTAAACATCATGTAGTTTCTGG GGTGGGGTGGGTAGCTCACATGGTTGAGCTAAGGGTAATTGCAGGTGAAGGATCAGGGTTCGAACCCTGCGGAGAGATAA TTTGTACTAATTTGCTAACAACTAACATTTGCCTATAAAATGATGTCACGTAGTTCTGAACTTCTCATAATCAAGGTAAC ACAATAACCCATTTGCCAAACAGAAACAGATCAGAGGGAAACAGAGGAACAACTACTAAAGAAAGAGAGAGTGAAGTAGA ACTGGAGAATGAGAGTTCATATCGAAAACAGGGGAGAAGAGAGGACTTCGTCGCTGGAGGACTTTTTCATCAGCGGCAGT GGCGAAGCCCAGATCGAGACTCGCAAGAGAGAGGCGTTCAAGTTTCCTTGACATATGAGTGAGAATGAGTGTTGTTTGAG GGTGAAAACTATATTTTTGCTAACCGGGCCGCAGAAACGGGTAAAAAAGACGAGGTTGTATGGATCTTCATGAAAGCGGT AGAAGCTTCAAAATCGCCATTTTGCTACGCTTCTGCGCTTAACCAACGCTTTCGTCGTGCTTTTGCTAGATTTTCGCTTT AGCAGCCCCGTAAAGCGTCGGGGGCCTTAAATCACGCTTTAACGTGTTAAAGCGCGCTTCTGACTACCTTGCATGTTAAG ATGACCCTCGTCGATTGGTACTTTACCCCATGCTGACATGCCACTTTGCCTAATAGGTAGTTTAGGCGAAGCCAATGATT GAAGGAATCCAGACCTAGGGACCATAAAACTCTAACATAGGGTTGATATTAGCAAACAAGCTTCAAATCCGTCCAACGCT TGCCAAACACATCGCATGCGACATGATTTCTCGTCCCTCTAAGAACTCTTCTGACAAATACTGGTTAGCCTCAAATGACT GCCTGCCCACCCATACATCCCACTAAAACCAGGGCAGTCAAACCCTTGCCGCAGTCAGTTGCATTTTTATGACTACATCT CGATGAAGTAACTTGTCTCATGATTTACCACGCTCTTCTTGAAGTCAACGGCCCTCTACTCGAGGCGTAGGCACAACACT CAAAGATCTTATACAATATGCAATCCTTCCCCTAACCATCCGATTAAACGAAGTATTAAGGAATCCAACGGCTCCTTTCG TCGTTGTACCTCGTACTCATCATAACAATTGCTCCAACCTCGAACTCTCTTACCCCGAAACCCTCAAAACCGAACGCTAT AAATGGAAAGTTCCTCAAGGCATAAGGTACATATATCCTCAACCGTGTGAATGTGCTTTTACTTGGAGTTTCAAAAACTA AGTCACTGTCACACTTTTTACTTCTTAAGCAAGTAATGACATAGAGCTATTATTCCTTCTTTTGTAACGATTGTGGAGCA GTTGCCTTCAACCTTATGTTTATGTAGTATTTTAATTGAGTAACATAACCAACCCATATAAGAGAAATTGCTCATTTTCT TAGTCTTCATCGATTTTTCTTTTCCTAACGTATACATAGTTTCAAACTTCACAGAAAAATGTAGCTATTTTTACACGATT GCAAGGCACAAACACAATTTGGAATAGAAATTTAAACTTCTCGTCTGGTTATAACAGGCAAAGGCGTTGCAGGAGCAAAA CAATGTGCTAGCAAAGAAGGTAGAGGTCACATGTAACATTTCAATCTAGCTATCCGTCTTGTAGACAAGAAAACATAAGA AAAAGAGTTAATTTTTCTTGCATTTATGGCTAGATTAAGGATCAACAGAAGACAATGGCTGAACCTCTGCACCCTCCTCT ACAGAAACACTTGGCCAAAATTCTTCAGGTCTCAACATGGGCACTCCAGAGCAACACTCGCCACAAAGACTAGATCCTTC TTTAACACTTGGGTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTATCTATGTTATAGAGAAGGAATCAATC TAAAAAAATTAGAGGGAATTTCCTTGTTGAATCTGATACTAAAATGTTAATCTAAACAATGAATAGGGTTCTTAACAATG TTACAGCTTAGTAGTTGGCAGAAACAGTTGCATGGATTGTGTTTGAGTAAATGACAGTCTTGATCATAAACCAAGCCCAT AAATAATCCATGTAGTCCAAATGTAATTTATACAACCTCGAGAACTATTCAAAAGTGCATAATTTTGTTTTTTTAATAAT GATGTATCTCCATATAATTTAATGATTCTGTAAAAAACTTTACTAGCATAGATAGAATAACTAGTCCATAGTTACAACTT TCTTAATTTCTGTTATTCCGTTGGGATGTGTGTTTTCTCGGAAACCAAACAGGCCCTAAATTCTTGTTTTTTCATAAAGT TGAAGACAGCAGAAGGCTTTTCAATTAGAGAATTGTAATGAACATAGGAAAATTGTCAGTGTACAAAATAACACAAATTT GATTATTGTGAAATGCTGGCAACATCACCTCCAATTTCTACTGGTTAAGCCTCAGTGGAATTTACTAAATTATATGCGTC CACTCCTATTTTGCCAGGTTTCATTCCCTATTTGGTGATATTACATAAATGTTAACTTGAAAGTGTGTTAGATATTGTAT TACTAGCATTCCTCTGCTTATGTTGTAGACACCATCAAACATAAGTGGAGATAAAGAGGCTGGAAGAGCTTGTTAGTTTC ACAATTTTTGGCTGCAGAGTAGCCCTTATAGATCCAGTTCTCCTTTGCTAGAACAAATTGTTGAAATGTTTACTGAAAGC CCACTATCATCAAGGAAATAGGAACTGCAGAAAGTTTTGTTATAAATGGAAAATTGTCTGACATACAATTTCACAGCAGT AGCTATGAATTTTAAGCCTGTGTATGCCTAAAGCCATTGAAAAGCCACCAACAAGGTATTATCACATACCTGCAGAAGTC CACTCCACAGTGAGCTAGTCGTCAAATCGGGATTTTGACCTTAATCAGGGAGGGGGTTGTAAATCGTAAATTGCTAAATC ATATGATTTTAGCAGATCTCTATATAATATACATATATGTGTGTGTGCGCGCTTATAAGTTCTTATATGCATATAAGATA GCGCAAATAAAAATTGGGATTGGAGAAAGAGAAGAAAAGCAGGGAACATAACTCCAGATTCTAGAATAGAGCAAGCTACC AATTTAGGGAGTAGGGTGTGAATTAGCAGCGATGGCGATTGAATCGCAAGGGGCTCTTGAATCGCAAAATCATCCGATTT TAATCGCGATTTGACTAGCATGCTTACTAGGACAATTATATCTTATGATATGTACATTATTGTTTCAGATTATAAGTGTC AAAAAGGTGCAGTGGGACTTTACAAGCAACATCGCTGCAGGAGAATGGTTGAAGTTAAAATTGCTCCTAGTAGCACTACT GTCATGACATCCCAACATGGATGCTTCATTATTATTTTACGAGATGCACCAGCATTACACTATTTTTGAGACGTGATGAA TGTTGAACTCTATTTTGTTGCTACTTCTAGACAACTGCTGGTTATTGTATAGGATTGTGGCCTTCAAATTTGATGGTATG GCCAAAGGTTAAATAATGCAAATGATGTAAAAATCAACTGTTAAGTGCACCAACAAAATGGTACAGTGTAAAGAAATAGA AAAACTAATGCATCATTACATCCTT
CDS sequence (LotjaGi2g1v0270500.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGAGGAAGGGTTCAGTTGAAGCAGATCGAGAACAAAACTAGTCGGCAAGTGACGTTTTCAAAGAGGAGAATGGG GCTGCGAAAGAAAGCCCATGAAATCTCTGTGCTCTGTGATGCTCAAGTAGCATTGCTTGTCTTCAACACCAAAGGAAGAC TTTATGAGTTTTCATCTGAATCCAGCATCGAAAACGTGTTGGAACGATATGAGAGACATACCCAAGCAGTGCAACTTGTT GGAGCTGATAAAGAACAACCGAGAAACTGGTCCTCGGAATGCTTCAAGCTCACCGGTAGAGTTGAAGTCTTAGAGAAGAG CATAAGGAACATCGCGGGACATGATCTGGATCCCTTGAACTTGAGAGAGCTTCAGGGTTTGGAGCATCAGCTTGACACAG CTCTAAGGCGCATCCGAACTAGAAAGAACACAGTTATGAATGAATCCATCTCAGAGCTGCAGAAAAAGTTCATCTCAAGA AAATGGATCCTCTTCAGACTTCAGAGGAATCATCTGCATGCATTCTGCAATCTCTCTCAAGCAAAGGCGTTGCAGGAGCA AAACAATGTGCTAGCAAAGAAGATTAAGGATCAACAGAAGACAATGGCTGAACCTCTGCACCCTCCTCTACAGAAACACT TGGCCAAAATTCTTCAGGTCTCAACATGGGCACTCCAGAGCAACACTCGCCACAAAGACTAG
Protein sequence (LotjaGi2g1v0270500.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRGRVQLKQIENKTSRQVTFSKRRMGLRKKAHEISVLCDAQVALLVFNTKGRLYEFSSESSIENVLERYERHTQAVQLV GADKEQPRNWSSECFKLTGRVEVLEKSIRNIAGHDLDPLNLRELQGLEHQLDTALRRIRTRKNTVMNESISELQKKFISR KWILFRLQRNHLHAFCNLSQAKALQEQNNVLAKKIKDQQKTMAEPLHPPLQKHLAKILQVSTWALQSNTRHKD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 60 | 60 | 1.5E-33 | ||
| ProSiteProfiles | 1 | 61 | 61 | 30.74 | ||
| SUPERFAMILY | 2 | 76 | 75 | 1.57E-29 | ||
| CDD | 2 | 76 | 75 | 1.49651E-36 | ||
| PANTHER | 2 | 156 | 155 | 4.1E-83 | – | |
| PANTHER | 2 | 156 | 155 | 4.1E-83 | – | |
| ProSitePatterns | 3 | 57 | 55 | - | ||
| PRINTS | 3 | 23 | 21 | 3.2E-28 | ||
| Pfam | 11 | 57 | 47 | 5.8E-23 | ||
| Gene3D | 13 | 78 | 66 | 6.6E-26 | ||
| PRINTS | 23 | 38 | 16 | 3.2E-28 | ||
| PRINTS | 38 | 59 | 22 | 3.2E-28 | ||
| Pfam | 85 | 157 | 73 | 5.9E-20 | ||
| ProSiteProfiles | 87 | 201 | 115 | 13.589 | ||
| Coils | 181 | 201 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA polymerase II regulatory region sequence-specific DNA binding | Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Positive regulation of transcription by RNA polymerase II | Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi2g1v0270500.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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