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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0272500 |
| Transcript ID | LotjaGi2g1v0272500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WPP domain-interacting tail-anchored protein 1; TAIR: AT5G11390.1 WPP domain-interacting protein 1; Swiss-Prot: sp|Q8L7E5|WIT1_ARATH WPP domain-interacting tail-anchored protein 1; TrEMBL-Plants: tr|A0A1J7H1F3|A0A1J7H1F3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0272500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74335203..74340306) extracted from Lotus japonicus Gifu genome v1.2.
AGTTGTTATGTCTTCACAATTGCCATTCCATTTCAAGTACCTATAGATCAGATAATAATACTAAGTAAATCTATGTTTGA AAATCGTTTTAAGTTAAAATTAATTTTCAAGACAAACTTATATGTTATCTGTGTCTGAATCAATTATTACTTATTAGAGG TTGAAACAAACAACAGTTAATATTTAAATTGTTTCAGCAATCCTTGCTACAGTTCTGTAATTTCCTTTTCCCATTATACC TTCCCCAAACTCAGTGGATTCACTCCCAAGTTTCTGGACAAGTGGGGTGTTAAAATGAGCACTGAAAGTGCTGAAAGTGT TGTTAGTGTTGATCTTGAAGGTGTTGTTTCATCATCCAATGGGGATGTAATTGGGGATCCGGGTGTTGTTAGCAGCACAA AGCTTGCAAGGTTGGATTTGAGTTTGGCATGTTTCTCAGAGAAAGTTTCCAACTTGAGCATTTTTGTGATGCATCTAGCA ACCATGGAGAGTGAACTTGATGGCTTAGCTTGGGTGAAGGATCACATGGGACTTGGTTCTTTTGAAAAGGTTCTGGAATT TGATCTGTTATCTGGAGTGTTGGGTTCAGAGATCAGAGAGTTAGATGGATTCTTAGACACTCTTAAATCTGGGATTGTGG AATCTAGAGAGAGGGTGTGGTCTTGCACTCATTTGGGAGAGGCTTTCATTACAATGCAAGACAAGTTACTTGACTGTGAG CAATATCTGAAGCAATCTGAACATCAGTTCACTGAAATTAAGATACAGTCAGCTAGCTTCCAGAGGAATTTGTCTTCTTT AAAGAAGGCAGAAAATGGTATGTAGAGGATCTTATTTTATTCATTTCTTCTCAATTTTTCCTAGCCTTTTTCCTATTTCA TCAGGTTGGTAGAAAAAAGGGTATTCTTTTATTTCTGTCTCATTTTCTGGGGTTTCTCTTCAATTTCCCTGTGAAATTTG TTGATCAAAAGGGACTATAACATCTTTGTAGATTGCTTTCATTACAAAATCTTTTTAGAAAAAGGAAGGAAGAAGCAAAT AAAGCGGTGAAGAACATTGAATTGACTGGCTCAATATTGCTGCTTCTTGATTGATTTGTAGCAAATAAGAATACAATTAT GTGAATGTTTCTGCTTCTGAATATAATTGTCTGGCTCAATATTTCTTCTTATTTTGTTGGGGGATTTTCGATGACAGCAG GTAATGGTGAAGCAGATAAAATCATCAGAGAGGGTGATAAATCTTTGAATGTAAATGGACAGATAAAACTGCAAACAGCT GGGCAACAAAGGTATATTCTGAAAATGCTGGATAAATCATTGGCAAGAGAAATGGATCTTGAGAAGAATTTATATGATTC AAGAGAAATTGAAGGAAAGCTAAAACTACGAGTGTTCTCTTTAGATCAAAAGTTAGTTCACATGGAGGAAGAAGCAATTG ATGTTTGGGAAAGATTGTTTGAGGCAAACAATGCACGTGAGATCCTGATGGGAATTTCAAAAGGTCTGTTGGGCAGACTC CAGATTTCTCAGTTCAAATTGAATGGTTCCAGTCACCATGAATTTGAGCTTCAAGCTAAGCTTGAAACTCTTGTAGAACA ATTGAAAACCAGAGATGTTATTGTGGAGAAGATCAAAAGCAACAGTACTGAATTAAACAGCTCTCTTCTGGATCAGACAA ATACTGCAAAAGCTGATCTGAAAGATGCTGAAGATAAGCTAATCCATGCCAATTCTGAAATCTTCACTTTAACTGAGAAG GTGTCTTTACTTGAGAAGCAGCTAGAAGAATCTGAATCCCAGCGACTGAATATGAAAGCATCGGCTGATGAATATCAGAA GCAGTACAATGTTGTGTGCTCTGAAGTAGGAGACATGGGAAATCTTGTTGTTGACCTGAAACAAATTGTAACCAATGAAA AAAGTAGGGCTGATAGTGCAGAAACTAAGTGTAAGTTACTGACAGAGATTAATTCAAAACTCAATGAAGAGCTGAATCTT TTGAAAGGCGGTGGAGACAATTCCAAGAGAATTTATTATAATCTTCGATTGCGGAATAAAGTAGCATCTGCGGAAGCTGG TCAGGAGAAGCAAAGTATGTTGTATTCCACAATTAGTGATATGGAAAATGTGATAAAGGATCTTAAGTCAAAGGTTTCTA AAGCTGAGAGTCAGGCTGACAGTGCAGAGGAGAATTGTATAATATTGTCTGAATCTAATGCTAAGTTAAATGAGGAACTG AAGTTCTTGGGGAGTAGATTGGAATGCTTAGAGGTATCTCTGCACATAGAGGAGGAAGCAAAAATGTTAACTGCGAAGCA GATTGGAAAGCAGACTGAATTTTTTAAGAATTTGGTGACGCAGCTGGCTATTGAAAGAGAGCGTCTGAAGCAGCAGGTAA AGACTGAGATGGAGAATTCATTTCTTGTTAATTAAATTATAAATCTTTCATGGTGTGTCCTAGTTTATAGACTGCTAGGA CTACTTCACTCCTCAACACCTTTTGATTACTCATATTTCACAAAATTTCGTAGACTCATCTATATAAACTAATTGATACC TCAGTATAGGATGGTTTCATCAATGATATGATGTACGTGCCTATTTTACTTCTTTTGATATACATGTATTCATTCATGTG CATAGGCGTAGTATGTGAGTGGGCCCATCATTTATTTCTTTTTTTATTTCTCCACAGTCTGTTTTAAGCAGTATGCAGCT CACCGAGTTGATGCAGTATCATGTAGTTGCTCCAATATTCTCTTCAAGCATGTTAGTGATCTTGATAAATGAGGAAGAAA AAATCAATGAACAATGACATTTAAACAACTCTGCTTGAGTTTTGTGAATAATATGCTGAAATGTGAGATATCCCAAAGTG AAAACCTTCTGATATTTATGACTCAACATCTTAGCTAAGATAGATTGAATAAATTAAGGGCCTAGTTTTACTGCTATTTG GCTTACTGAAAATGTTGTATTTATCTACAGTTATCTTCCCTAGCAAGTGAGAACAAAATTTTGGTAGTGAAGCTAATGCA GACATATAAAGATCCTTCTTGAGAAGCTAGTGAGACTTCAGCCATTGGCCATAAGGTTGGTACATTTGACTTTTTTACTT GTTTTTTGATATGTGCATGTAAATGACTGAATGGCGAGGATTTCTTAACTAGTTAACTCAAAAAAGATTAATTGGCTTAA AAAAATATGTTCTGTTTTCAATTTTACAAAAAGGTTTTTCTGTTCTAAAGATAGTATCTGGACAACAGTGGGCTATAGAG AGCATTAATTGGTTCCCTGTTGGGAGAAGTATATGCTGTGTAAAGTGCATATGATTACCATCTAATAAAAGACTAAGCAT GACAATTGATCATTGATGTCTGAAGTTTATAACTTCCTACATATGTGACTTGTGAGCAATAGCATCAAGATAAAAAAAAG GTTTAAATATTGCAATAAACTAAAGACAACAGAAGAAAAAGGTGCATAGATTGAAATTCTTCTCATTATTACAGGTGGGC AGGTCTTGAAAACATTGATATGCAAAATTTAATGAAGTAAAACCTACAGATTCTATGTTAGTTGTTCGGAGTATGAGGAG AATAGATGCAGGGGTTCCTGAATTTTCATATCGGTTCTTGTTTTACTGGTTTCATTTCATCTGTGATTTATTTATGTTTC TATTACAGAAATTTGTTTTCTGTTTATTATTCATTTGTTGACTCTATTGATAGGTGTTTAATTCAAAGCATTAATTATAT TTGTGTTATAAGCATTGAGCTTTTCAGAACAACTAGTTGGTCCCCAACTATCAAAATGCATTTCGTTGTCTAAGAAAGTG GCAAAAGTCGGTCGAGTTAGTCTATCCGTCAGTTTTGGTCAACTAATAAATGTGACATGACTGTTAGATGCTGATGTGAG AAATGTCGGGCAAGTTAGTATCTGAATGTGTTAAACGTCGGGCAATTAGTCTCCAATTGTATACTAATACACTATTTTAC AAAAGGGAGTGGGGAGATTCAAACTTGGAACTTTGGGGTGGTAAAACAAGCCATTTGCTAGTTGAGCCAAGCAATCTAAT GATTATAATGTAAACTCACTTATAATGTGAACTTAGTTACATTTCTTATGTCAAGCTATCTCATTTTGTTGTGGTGTGTA AGGAGCGGTGAACCATGTATTATACGGTTTTTCTCATAAAACTCCTCAAGACTGGTTGTGTTAGAGCATCTCCAATAGAG TCCTTATTTTTGGACCTTAAAATAAGATCCGGATCTTATTAGATCCCACCATTGGAGCTATCCTACATGACATGAGATCT TAGCAAAAGCTAAGATCCATGCCTTAGCTCAGGTACTCTCAAATGTAGGATCTTAAATAAAATAATATTTTTTTTTCTCT CCTTCAATACCATAATCAAAGTGAAAATTAGGGAGGAAAATAAATAATATAAATATATTGAGTACTGTGGGCCCAGACAA AAGTAAAATAAGATCTCAACCACTAGAGTGAAATGTGTATGAAGACCTTATGAGTGTCTTAAATCCTATGTGGCAATTTG GGCCCACAAGAATTGAGTTAAGTCCCAAAATAAGTTCCTACCATTGGAGATGCTCTTATACTCACCACTCTTATTAGGTA CTGTCTTTTTATTTTCTGGTTCAATTAGCGCGGGAAAAGTTTCCAATTCCGCACTTAAATGTGCGGTAAGGTTTTTAGTA CCGCACTTATACGTGCGTGAAAAGCATTTTATTTGTGCGTTCAACACTCGGTAAAACTATAAGTTCGTAATCAAAAAACA AACCACACTTATGACGTGCGGAAGGTATTGCATATTATAAATGCGGAGAGTGATAAATACATTCTGCATTTTAAATGGGT GGTTTAGGTATCAAGCGTATTTTGGGAAAAAATTATGTAAAGAGATGACATAACTATTCATGCAACCCTTAAATTATCAA AATTCGAAAACACTCTTCATATTTTTTTCGCCAGCACTTTCAAAGTGTATCGCGTTAACGTGACACACTTTAAAATGTGT TTACTTGCATAACAGAAATGGTGGTAAACAACGATGAGCTTACTTGTGAGTGTAACGACAAAGT
CDS sequence (LotjaGi2g1v0272500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCACTGAAAGTGCTGAAAGTGTTGTTAGTGTTGATCTTGAAGGTGTTGTTTCATCATCCAATGGGGATGTAATTGG GGATCCGGGTGTTGTTAGCAGCACAAAGCTTGCAAGGTTGGATTTGAGTTTGGCATGTTTCTCAGAGAAAGTTTCCAACT TGAGCATTTTTGTGATGCATCTAGCAACCATGGAGAGTGAACTTGATGGCTTAGCTTGGGTGAAGGATCACATGGGACTT GGTTCTTTTGAAAAGGTTCTGGAATTTGATCTGTTATCTGGAGTGTTGGGTTCAGAGATCAGAGAGTTAGATGGATTCTT AGACACTCTTAAATCTGGGATTGTGGAATCTAGAGAGAGGGTGTGGTCTTGCACTCATTTGGGAGAGGCTTTCATTACAA TGCAAGACAAGTTACTTGACTGTGAGCAATATCTGAAGCAATCTGAACATCAGTTCACTGAAATTAAGATACAGTCAGCT AGCTTCCAGAGGAATTTGTCTTCTTTAAAGAAGGCAGAAAATGCAGGTAATGGTGAAGCAGATAAAATCATCAGAGAGGG TGATAAATCTTTGAATGTAAATGGACAGATAAAACTGCAAACAGCTGGGCAACAAAGGTATATTCTGAAAATGCTGGATA AATCATTGGCAAGAGAAATGGATCTTGAGAAGAATTTATATGATTCAAGAGAAATTGAAGGAAAGCTAAAACTACGAGTG TTCTCTTTAGATCAAAAGTTAGTTCACATGGAGGAAGAAGCAATTGATGTTTGGGAAAGATTGTTTGAGGCAAACAATGC ACGTGAGATCCTGATGGGAATTTCAAAAGGTCTGTTGGGCAGACTCCAGATTTCTCAGTTCAAATTGAATGGTTCCAGTC ACCATGAATTTGAGCTTCAAGCTAAGCTTGAAACTCTTGTAGAACAATTGAAAACCAGAGATGTTATTGTGGAGAAGATC AAAAGCAACAGTACTGAATTAAACAGCTCTCTTCTGGATCAGACAAATACTGCAAAAGCTGATCTGAAAGATGCTGAAGA TAAGCTAATCCATGCCAATTCTGAAATCTTCACTTTAACTGAGAAGGTGTCTTTACTTGAGAAGCAGCTAGAAGAATCTG AATCCCAGCGACTGAATATGAAAGCATCGGCTGATGAATATCAGAAGCAGTACAATGTTGTGTGCTCTGAAGTAGGAGAC ATGGGAAATCTTGTTGTTGACCTGAAACAAATTGTAACCAATGAAAAAAGTAGGGCTGATAGTGCAGAAACTAAGTGTAA GTTACTGACAGAGATTAATTCAAAACTCAATGAAGAGCTGAATCTTTTGAAAGGCGGTGGAGACAATTCCAAGAGAATTT ATTATAATCTTCGATTGCGGAATAAAGTAGCATCTGCGGAAGCTGGTCAGGAGAAGCAAAGTATGTTGTATTCCACAATT AGTGATATGGAAAATGTGATAAAGGATCTTAAGTCAAAGGTTTCTAAAGCTGAGAGTCAGGCTGACAGTGCAGAGGAGAA TTGTATAATATTGTCTGAATCTAATGCTAAGTTAAATGAGGAACTGAAGTTCTTGGGGAGTAGATTGGAATGCTTAGAGG TATCTCTGCACATAGAGGAGGAAGCAAAAATGTTAACTGCGAAGCAGATTGGAAAGCAGACTGAATTTTTTAAGAATTTG GTGACGCAGCTGGCTATTGAAAGAGAGCGTCTGAAGCAGCAGTTATCTTCCCTAGCAAGTGAGAACAAAATTTTGGTAGT GAAGCTAATGCAGACATATAAAGATCCTTCTTGA
Protein sequence (LotjaGi2g1v0272500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTESAESVVSVDLEGVVSSSNGDVIGDPGVVSSTKLARLDLSLACFSEKVSNLSIFVMHLATMESELDGLAWVKDHMGL GSFEKVLEFDLLSGVLGSEIRELDGFLDTLKSGIVESRERVWSCTHLGEAFITMQDKLLDCEQYLKQSEHQFTEIKIQSA SFQRNLSSLKKAENAGNGEADKIIREGDKSLNVNGQIKLQTAGQQRYILKMLDKSLAREMDLEKNLYDSREIEGKLKLRV FSLDQKLVHMEEEAIDVWERLFEANNAREILMGISKGLLGRLQISQFKLNGSSHHEFELQAKLETLVEQLKTRDVIVEKI KSNSTELNSSLLDQTNTAKADLKDAEDKLIHANSEIFTLTEKVSLLEKQLEESESQRLNMKASADEYQKQYNVVCSEVGD MGNLVVDLKQIVTNEKSRADSAETKCKLLTEINSKLNEELNLLKGGGDNSKRIYYNLRLRNKVASAEAGQEKQSMLYSTI SDMENVIKDLKSKVSKAESQADSAEENCIILSESNAKLNEELKFLGSRLECLEVSLHIEEEAKMLTAKQIGKQTEFFKNL VTQLAIERERLKQQLSSLASENKILVVKLMQTYKDPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 329 | 329 | 5.1E-248 | – | |
| PANTHER | 1 | 329 | 329 | 5.1E-248 | ||
| SUPERFAMILY | 318 | 533 | 216 | 1.85E-7 | – | |
| Coils | 328 | 390 | 63 | - | – | |
| PANTHER | 338 | 593 | 256 | 5.1E-248 | – | |
| PANTHER | 338 | 593 | 256 | 5.1E-248 | ||
| Coils | 419 | 439 | 21 | - | – | |
| Coils | 480 | 535 | 56 | - | – | |
| Coils | 561 | 581 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0272500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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