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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0277700 |
| Transcript ID | LotjaGi2g1v0277700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-glucosidase; TAIR: AT1G68560.1 alpha-xylosidase 1; Swiss-Prot: sp|Q9S7Y7|XYL1_ARATH Alpha-xylosidase 1; TrEMBL-Plants: tr|A0A151QQ78|A0A151QQ78_CAJCA Alpha-xylosidase; Found in the gene: LotjaGi2g1v0277700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74936178..74941398) extracted from Lotus japonicus Gifu genome v1.2.
TGCTTCTTATACTAGTTTGGCAAAAGGAAAATTTATGCTTGTGAAATAGGAGATAGGAGATTGGCTATGCTTTTCTAATT TTTTATCTGCTGTTCACTACATTCATAGACTAGTGCATTATTTTTTATCTATATTTGCACTTTACCTTTTATGTTCGCAT AGAAGATGTGGTTGATTAAATGTATTAGGATCCTATAGAATCAATTTTCGTTTGTTATATGAAAAAATAATCTGGTTTCT ATATTTATAAAATCTGACTTTATACTGGTTTGGCAAAAGGAAAGTTTACACTTATGAAATAGGAGATAGGAGATTGGCTA TGCTTTTGAATTTTTCATCTGCACTTCACTACATTCATAGAATAGTGCATGTTTTTATCTATATTTGCACTTTTGTCTTT ATGTTCATATAGAATATGAGGTTGATTATTCATACAAGCATTTACTTCATACATGGGCAAGAGAGTAATTTGGTAAGCGA CGTAGTGTTGTCATCTATGCGGTTAATTATTTATATATGCCATTGCTACCCTCAGTGTTCGTCCTCAGTGCATTAGCTAT GGTTTTTCATCACCGTTTATCTGCGCTGTGCCTCTCTTCTCTTCTTGTAACTCTGCTTCTATGTGCAGCTGGGGTGAGTT CTTTTTCTTCAGAAAATGCCACCAAAATAGGCCAAGGCTACCGTCTTATCTCCATTGAAGGAACCCCTGATGGAGGCCTC GTGGGTCTTCTTCAAGTTAACCAGAAGACCAATATCTATGGCCCTGATATCCACCTTCTACGCTTCTACGCCAAGTACAT TTCCCCTTTCAAAATCTTCCATTAGTATTCTTCTCTTCTTTTTTGTGTATCAATATAAAGAAGTTTTTTTTTTTTTCAAT GGTTATCCTTCTTCATTGGACTTAATTTTGCAGGCATGAGACAGAGAACCGTTTGAGGGTACACATAACTGATGCTAATA AGCAAAGGTGGGAGGTCCCCTACAACCTTTTACCAAGAGAGCAACCGCCAGCTCTGTCTCAAACCATTGGAAGGTTCAGG AAGAACCCTATTGCAGTCTCAGAGTACTCTGGTTCTGAGCTTCTGTTCAGCTACACTTCTGACCCTTTTAGCTTTGCGGT AAAAAGGAAGTCAAATGGTGAGACCCTTTTTGACTCTAGCTCTGGTGATTCAGACCCTTTTAGTTCCCTGGTTTTCAAGG ACCAGTACCTTGAGATTTCTACCAAATTGCCTGAAGATGCTTCCTTGTATGGTTTGGGGGAGCATACACAGCCGCACGGG ATCAAATTGTATCCCCAAGACCCTTTCACTCTGTATACAACTGATATTCCAGCTATTAATCTCAATGCTGATCTGTATGG ATCGCACCCTATATACATGGATCTCAGAAATGCAGGTGGTAAAGCTTCTGCACATGCTGTTCTGCTGCTCAATAGCAACG GAATGGATGTACTTTACACGGGAACCTCTCTGACATACAAGATTATTGGAGGTGTATTTGATTTTTACTTCTTTTCTGGC CCTTCGCCTTTGAATGTTGTTGATCAATACACTTCCTTAATTGGAAGACCAGCTCCAATGCCTTACTGGGCTTTCGGTAT GATTCACTTATTACTCTCATATTCAATTTTGCTGATTTGGGTGTCATTGCCATTTTTTTGATAGATATTATAGATTGCAC AATTTTCAACTGTGAAAAATGGTGTTTACCATATGCAAACACTTAATTGATAAAATATCATTGCCTTAGTTAAGTTGGAG GAAATGTTTTCATTTTTCTATTTTCACTAATAATTGAGAAGTATAAGTATAACTCATTCTGGATCCTATTGCAAAGTGGT ATTTTTGTAATTATTAATGTAAACATATACCATTTTTTAAAACCAAACGGAGTGTTTTTCAGATCTGTGATTAGGTGAAT TCTGTGACTTTCTTGATGCATGATTCTGAGGGTGTTTTCTTGTTATGCATAGTGCATTTTTTGTGCTTTAGCTTATCTGT ACAATGTATGATGTGGATGTTCTGAGATTTTTCTAGTTAGGTCTGCATTATTTTACACTCTGTCAATGTTTGTAACTTTG TATGATTTGAATCCTGACATAAGTTTTTACAGTCTAACTTTCTTGAGTTCTTTAATACCTCTTAGACAGACGTGGTTAGG AATGTCACAACAAAAGTGTGAAATTTAACTTTACCCTATACAAAAATCATCTTTTGAAAAATAAAACTGATCCACGGGCT TTTCATCTTCAGATTTACCCCCATGCCAAACTGACCCTAAAGGTATTGTGAGCTCTGTTGGGAAAAGTCTGCTCAATATT GCTATCATGTAGGGAATAAGGTTAAGCATTGGGTCAAGGGGAGGGATGTTTTTATTTTTTAAAAGCCAAACATAATATTA AAGTAAAGGAAGCACAAGGGGTGCTTCAACCCATATACACAGCAAGGTCTCATGAAAAAAAGAAAGAAACACAGAAAAAG TTTCCCCCTCCCCAGCGAATTTGCAAGGAAGCATGATCCCATCAAAAATCCAACAACAAACATATTATAGCTGCTACATT CTAACTGACCAAAGGGAGGATACTATTTAAGTTGGATTTTTTCCCTATGAACTAATCATGGCTTCATGCTTTGTGTGTGT GTGTGTGTGTGAGTGAGTACCATTTTTTTTGTACCAAGCATACTTACCAAGTAAATTAGGAAAGAGATTTAACCAATCAG ATGTTTGTTAGAACATGAAGGGGGGAATAAAAATTAGAATAGAAATGCTATCAAAGGTCAGTTTTTAATACACACTTTGT ACTTATAGAGTTTATGAATTGGGTGAAAATTCATGAAAGATTTTGTCTTGTATCTTGCAAGTCCATCCTAGAATTTTCTT TTGAAGCCTAATTTTATAATGACAGGCGCTATTTTGCTATTTATTTACATGTTACTACTCACTTGTCAATTAAACATAAA GACAGGCAGCTTTAGATCCTTATGCTTCAAGATCTAGTTGATTAAGGTACTTGAAACTTTTCTAAAAGTACTTTAACTGA TACTCTCACTTATGTGGGATTATAGGTTTCCACCAATGCAGATACGGGTATCACAACTTATCAGTGGTAGAAGATGTTGT GGAGAATTACAAGAAGGCTCAAATCCCACTTGACGTGATCTGGAACGATGCTGATCACATGGATGGATACAAGGACTTCA CTCTCAACCCAAGCAACTACCCTCGTCCAGAGCTTTTAAACTTCCTCAACAAGATACACAGGGTAGGAATGAAATACATT GTCATTATTGACCCTGGTATTGGTGTAAACTCCAGTTATAGTGTATACCAAAGAGGTATAGCTAATGATGTATTTATCAA GTATGAAGGTGAGCCTTACTTGGCTCAAGTTTGGCCAGGGCCAGTGAACTTTCCTGATTTTCTCAATCCAAAGACGGTTT CTTGGTGGGGTGACGAAATACGTCGCTTCCATGAACTTGTTCCTATTGATGGCCTATGGATTGACATGAATGAAGTTTCA AATTTCTGCTCTGGAAAGTGCAAAATTCCTAAGGGAAAGGTGTGCCCTAGTGAAACAGGACCTTCTGTGGTTTGTTGTTT GGAGTGCGAGAACATTAACAAAACCCGATGGGACGATCCTCCCTACAAAATAAATGCCTCAGGAATACAAGCTCCTATTG GCCACAAGACAATAGCCACTAGTGCAGTCCACTATAATGGGATTTTGGAGTATGATGCTCACAGTATTTATGGTTTCTCT CAATCCATTGCAACTCACAAGGCCCTTCTAGGTCTTGAAGGCAAAAGGCCTTTTATTCTGTCGCGCTCAACTTATGTCGG TTCAGGCAAATATGCTGCACATTGGTCCGGTGACAATCAGGCTACATGGGAGAACTTGAGGTACTCAATATCCACCATGA TAAATTTTGGTATATTTGGGGTCCCAATGATTGGCTCAGACATATGCGGGTTCTTTGCACAACCCACTGAAGAACTGTGC AGCAGATGGATTGAAGTAGGGGCTTTCTACCCTTTCTCAAGGGATCATTCTGACTACTACACCCCTAGACAGGAGCTTTA CCTATGGAAATCAGTAGCTGAGTCTGCTAGAAATGCTTTGGGTATGAGGTACAAGATACTTCCATATCTTTACACTCTGA ACTACGAGGCTCATGTCAGTGGAGCCCCAATTGCAAGACCTCTTTTCTTCTCATTTCCAACATACACTGAGTGCTATGGC CTTAGCACCCAGTTCTTGCTAGGAAGCAGTCTCATGATTTCTCCAGTGCTTGAGCCCGGCAAAACAGAGGTGAAAGCACT CTTCCCTCCTGGTAGCTGGTACAGCTTGCTGGATTGGACACAGACCATTACATCAAATGATGGAACATATGTTACCCTTG ATGCTCCTCTGCATGTGGTGAATGTGCATTTATATCAGAATACCATTCTTCCAATGCAGCAGGGTGGATTGATATCTAAG GATGCTCGAATGACACCCTTCAGCCTCATCGTAACCTTCCCATCTGGGGCTGCTGAAGGGGAAGCGAAAGGGAACCTCTT CCTTGATGACGATGAACTACCAGAGATGAAGCTTGGAAATGGCTATTCCACCTACATTGATCTCCATGCAGCTGTCAAAC AAGGTGGTGTGAGAGTTTGGTCAGAAGTTCAAGAGGGTAAGTTTGCATTGGATCAAGGTTGGGTTATTGAATCTATATCT GTGTTGGGATTGGGAGGAAGTGGAGCAGTGCATGCACTTGAGATAAATGGAATGCCTGTCTCTGATGTGAAAGTTAGTAC ATCTGAACATAAGCACTTGGATGGTCAGGCAAATGGAGAAAGTAAGACCGGGATGGTAGCATTGAAAAACTTGAACATCC CTCTTGGTGAAAACTTTGCTTTGACCTGGAACATGGGATGATGATAGGTTGAAACTGTCTCTTATCATCATTTGTAACAA GCCAAGGCAACAAACCTTGTGAGGTGAAAACTGATTGTTGTTATAGTTCTTTAGGTGCCTGAATTGAAATTCTCCTCATT CCAGTGATTTAGGATTATTCCTTCAATGCCATTGTTGTAATCCAACATCCTCCAATCTTCCCATAATAAAGCAAACATGT TTATATAAATGTAGTCATTACATCCAGGATATAACTACTTTGAGTTTTTATTGCAGAGAAATGTTAGCAACATTGTCTTC ATTATTTAATTTTTATGCCAG
CDS sequence (LotjaGi2g1v0277700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCATTGCTACCCTCAGTGTTCGTCCTCAGTGCATTAGCTATGGTTTTTCATCACCGTTTATCTGCGCTGTGCCTCTC TTCTCTTCTTGTAACTCTGCTTCTATGTGCAGCTGGGGTGAGTTCTTTTTCTTCAGAAAATGCCACCAAAATAGGCCAAG GCTACCGTCTTATCTCCATTGAAGGAACCCCTGATGGAGGCCTCGTGGGTCTTCTTCAAGTTAACCAGAAGACCAATATC TATGGCCCTGATATCCACCTTCTACGCTTCTACGCCAAGCATGAGACAGAGAACCGTTTGAGGGTACACATAACTGATGC TAATAAGCAAAGGTGGGAGGTCCCCTACAACCTTTTACCAAGAGAGCAACCGCCAGCTCTGTCTCAAACCATTGGAAGGT TCAGGAAGAACCCTATTGCAGTCTCAGAGTACTCTGGTTCTGAGCTTCTGTTCAGCTACACTTCTGACCCTTTTAGCTTT GCGGTAAAAAGGAAGTCAAATGGTGAGACCCTTTTTGACTCTAGCTCTGGTGATTCAGACCCTTTTAGTTCCCTGGTTTT CAAGGACCAGTACCTTGAGATTTCTACCAAATTGCCTGAAGATGCTTCCTTGTATGGTTTGGGGGAGCATACACAGCCGC ACGGGATCAAATTGTATCCCCAAGACCCTTTCACTCTGTATACAACTGATATTCCAGCTATTAATCTCAATGCTGATCTG TATGGATCGCACCCTATATACATGGATCTCAGAAATGCAGGTGGTAAAGCTTCTGCACATGCTGTTCTGCTGCTCAATAG CAACGGAATGGATGTACTTTACACGGGAACCTCTCTGACATACAAGATTATTGGAGGTGTATTTGATTTTTACTTCTTTT CTGGCCCTTCGCCTTTGAATGTTGTTGATCAATACACTTCCTTAATTGGAAGACCAGCTCCAATGCCTTACTGGGCTTTC GGTTTCCACCAATGCAGATACGGGTATCACAACTTATCAGTGGTAGAAGATGTTGTGGAGAATTACAAGAAGGCTCAAAT CCCACTTGACGTGATCTGGAACGATGCTGATCACATGGATGGATACAAGGACTTCACTCTCAACCCAAGCAACTACCCTC GTCCAGAGCTTTTAAACTTCCTCAACAAGATACACAGGGTAGGAATGAAATACATTGTCATTATTGACCCTGGTATTGGT GTAAACTCCAGTTATAGTGTATACCAAAGAGGTATAGCTAATGATGTATTTATCAAGTATGAAGGTGAGCCTTACTTGGC TCAAGTTTGGCCAGGGCCAGTGAACTTTCCTGATTTTCTCAATCCAAAGACGGTTTCTTGGTGGGGTGACGAAATACGTC GCTTCCATGAACTTGTTCCTATTGATGGCCTATGGATTGACATGAATGAAGTTTCAAATTTCTGCTCTGGAAAGTGCAAA ATTCCTAAGGGAAAGGTGTGCCCTAGTGAAACAGGACCTTCTGTGGTTTGTTGTTTGGAGTGCGAGAACATTAACAAAAC CCGATGGGACGATCCTCCCTACAAAATAAATGCCTCAGGAATACAAGCTCCTATTGGCCACAAGACAATAGCCACTAGTG CAGTCCACTATAATGGGATTTTGGAGTATGATGCTCACAGTATTTATGGTTTCTCTCAATCCATTGCAACTCACAAGGCC CTTCTAGGTCTTGAAGGCAAAAGGCCTTTTATTCTGTCGCGCTCAACTTATGTCGGTTCAGGCAAATATGCTGCACATTG GTCCGGTGACAATCAGGCTACATGGGAGAACTTGAGGTACTCAATATCCACCATGATAAATTTTGGTATATTTGGGGTCC CAATGATTGGCTCAGACATATGCGGGTTCTTTGCACAACCCACTGAAGAACTGTGCAGCAGATGGATTGAAGTAGGGGCT TTCTACCCTTTCTCAAGGGATCATTCTGACTACTACACCCCTAGACAGGAGCTTTACCTATGGAAATCAGTAGCTGAGTC TGCTAGAAATGCTTTGGGTATGAGGTACAAGATACTTCCATATCTTTACACTCTGAACTACGAGGCTCATGTCAGTGGAG CCCCAATTGCAAGACCTCTTTTCTTCTCATTTCCAACATACACTGAGTGCTATGGCCTTAGCACCCAGTTCTTGCTAGGA AGCAGTCTCATGATTTCTCCAGTGCTTGAGCCCGGCAAAACAGAGGTGAAAGCACTCTTCCCTCCTGGTAGCTGGTACAG CTTGCTGGATTGGACACAGACCATTACATCAAATGATGGAACATATGTTACCCTTGATGCTCCTCTGCATGTGGTGAATG TGCATTTATATCAGAATACCATTCTTCCAATGCAGCAGGGTGGATTGATATCTAAGGATGCTCGAATGACACCCTTCAGC CTCATCGTAACCTTCCCATCTGGGGCTGCTGAAGGGGAAGCGAAAGGGAACCTCTTCCTTGATGACGATGAACTACCAGA GATGAAGCTTGGAAATGGCTATTCCACCTACATTGATCTCCATGCAGCTGTCAAACAAGGTGGTGTGAGAGTTTGGTCAG AAGTTCAAGAGGGTAAGTTTGCATTGGATCAAGGTTGGGTTATTGAATCTATATCTGTGTTGGGATTGGGAGGAAGTGGA GCAGTGCATGCACTTGAGATAAATGGAATGCCTGTCTCTGATGTGAAAGTTAGTACATCTGAACATAAGCACTTGGATGG TCAGGCAAATGGAGAAAGTAAGACCGGGATGGTAGCATTGAAAAACTTGAACATCCCTCTTGGTGAAAACTTTGCTTTGA CCTGGAACATGGGATGA
Protein sequence (LotjaGi2g1v0277700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLLPSVFVLSALAMVFHHRLSALCLSSLLVTLLLCAAGVSSFSSENATKIGQGYRLISIEGTPDGGLVGLLQVNQKTNI YGPDIHLLRFYAKHETENRLRVHITDANKQRWEVPYNLLPREQPPALSQTIGRFRKNPIAVSEYSGSELLFSYTSDPFSF AVKRKSNGETLFDSSSGDSDPFSSLVFKDQYLEISTKLPEDASLYGLGEHTQPHGIKLYPQDPFTLYTTDIPAINLNADL YGSHPIYMDLRNAGGKASAHAVLLLNSNGMDVLYTGTSLTYKIIGGVFDFYFFSGPSPLNVVDQYTSLIGRPAPMPYWAF GFHQCRYGYHNLSVVEDVVENYKKAQIPLDVIWNDADHMDGYKDFTLNPSNYPRPELLNFLNKIHRVGMKYIVIIDPGIG VNSSYSVYQRGIANDVFIKYEGEPYLAQVWPGPVNFPDFLNPKTVSWWGDEIRRFHELVPIDGLWIDMNEVSNFCSGKCK IPKGKVCPSETGPSVVCCLECENINKTRWDDPPYKINASGIQAPIGHKTIATSAVHYNGILEYDAHSIYGFSQSIATHKA LLGLEGKRPFILSRSTYVGSGKYAAHWSGDNQATWENLRYSISTMINFGIFGVPMIGSDICGFFAQPTEELCSRWIEVGA FYPFSRDHSDYYTPRQELYLWKSVAESARNALGMRYKILPYLYTLNYEAHVSGAPIARPLFFSFPTYTECYGLSTQFLLG SSLMISPVLEPGKTEVKALFPPGSWYSLLDWTQTITSNDGTYVTLDAPLHVVNVHLYQNTILPMQQGGLISKDARMTPFS LIVTFPSGAAEGEAKGNLFLDDDELPEMKLGNGYSTYIDLHAAVKQGGVRVWSEVQEGKFALDQGWVIESISVLGLGGSG AVHALEINGMPVSDVKVSTSEHKHLDGQANGESKTGMVALKNLNIPLGENFALTWNMG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 42 | 42 | - | – | |
| Phobius | 21 | 36 | 16 | - | – | |
| PANTHER | 22 | 936 | 915 | 0.0 | – | |
| PANTHER | 22 | 936 | 915 | 0.0 | – | |
| Phobius | 37 | 42 | 6 | - | – | |
| Phobius | 43 | 938 | 896 | - | – | |
| Gene3D | 49 | 311 | 263 | 2.1E-82 | – | |
| SUPERFAMILY | 52 | 298 | 247 | 3.14E-40 | ||
| Pfam | 69 | 199 | 131 | 2.2E-35 | ||
| CDD | 192 | 310 | 119 | 4.50302E-24 | – | |
| Pfam | 202 | 270 | 69 | 2.2E-7 | ||
| Pfam | 291 | 782 | 492 | 4.8E-151 | ||
| SUPERFAMILY | 301 | 693 | 393 | 1.4E-89 | ||
| CDD | 310 | 690 | 381 | 0.0 | – | |
| Gene3D | 312 | 677 | 366 | 1.7E-149 | – | |
| ProSitePatterns | 463 | 470 | 8 | - | ||
| Gene3D | 678 | 778 | 101 | 7.0E-35 | ||
| SUPERFAMILY | 695 | 775 | 81 | 1.44E-16 | – | |
| Gene3D | 780 | 938 | 159 | 2.0E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi2g1v0277700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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