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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0277800 |
| Transcript ID | LotjaGi2g1v0277800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-glucosidase; TAIR: AT1G68560.1 alpha-xylosidase 1; Swiss-Prot: sp|Q9S7Y7|XYL1_ARATH Alpha-xylosidase 1; TrEMBL-Plants: tr|A0A151QQ78|A0A151QQ78_CAJCA Alpha-xylosidase; Found in the gene: LotjaGi2g1v0277800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74943203..74948398) extracted from Lotus japonicus Gifu genome v1.2.
ATCTTGTTTGGATATTTATATACCCCATTGCTACCCTCACTCACAGTGTCAGTCCTCACTTCACTCTAGCTATGGCGGTT TCCCCTCACCGCTTAGCTTCTCTGTGCCTCTCTTCTCTCCTCTTAACTCTGTTTCTATGTGCAGCTGTAGCTACCTCCTC CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCAAATGCCACCAAAATAGGCCTAGGCTACAGCCTTATCTCCATTGAAG AAACCCCAGATGGAGGCCTTATAGGTCTTCTTCAAGTCAAGAAGAAAACCAAAACCTATGGCCCTGACATCCCCCTTCTA CGGTTCTATGTCAAGTACATTTCTCAGTTCACAAACTTCCTTAAAAATGGTTATGTTTTTGTTTTTGTTTTTTAGTGGTT AACCTTCTTCATTGTACTTGATTTTGCAGGCATGAAACTGATAATCGTTTGAGGGTTCACATCACTGATGCTAACAAGCA AAGATGGGAAGTTCCCTACAATCTTCTACCAAGAGAGCAACCACCAGCTTTAACTCAAACCATTGGAAGGTTCAAGAAGA ATCCTATTACAGTCTCAGAGTACTCTGGCTCTGAGCTTCTGTTTAGCTATACTTCTGACCCTTTTACCTTCAAGGTGAAA AGGAAGTCAAATGGTGAGACCCTTTTTGATTCTAGCTCAGGTGATTCAGACCCTTTTAGCTCCCTGGTTTTCAAGGACCA GTACCTTGAGATTTCCACCAAATTGCCTAAAGATGCTTCCTTGTATGGTTTGGGAGAGAACACACAGCCTCATGGGATTA AGTTGTATCCCCATGATCCTTACACTTTGTATACCACTGATATATCAGCTATTAATCTCAATGCTGATCTGTATGGATCA CACCCTATGTACATGGATCTTAGAAATGCAGGTGGTAAAGCTTCTGCACATGCTGTTTTGTTGCTCAATAGCAATGGAAT GGATGTTTTTTACACAGGAACCTCTTTGACATACAAGGTTATTGGAGGTGTATTTGATTTTTACTTCTTTTCTGGTCCTT CGCCTTTGAGTGTTGTTGATCAGTACACTTCTTTGATTGGAAGACCAGCTCCAATGCCTTACTGGGCTTTTGGTAAGATT CATTATTACTCTTCTGTTTTTATATGCCTATTATACTTGGTTTGAATGATATCAATGATGCTGATTTATGTGTCATTGCC CTTTTTTGTTAAATATTATAGATTGGACTGGAGGATTATCAATTGTGAAAACTGGGGCTTACCATATGTGAATACTTAAT TGATAAAGTATTATTGCCTTTGTTAAGTTGGAGGATATGTTTTCATTTTCTATTTACACTAGTAATTAAGAAAGTATCAC TCATTCTGGTTCATGTTGCAAAGTGGTAAATTTGTAATTATCAATGTGAACATAAAGCAGTTTCTAAAACCAAATAGTGT TTTTCAGATCTGTGATTGTGTGAATTCTATGACTTTCTTGATGCATGATATTGAGGGTGTTTTCTTGGTATGCATAATGA ATGATCTGAAAATGCAACAGTCATGATTTTTCAATTAGCTGTTGTGGGATTTAGGTTATCTGTATATTGTATGATGTGGA TATTTTTGATTTTTGTTTTATGAAGTTTGGTTTGCAAAGTTATTTTCCATTCTGACACTCTTTGTATGATTTGGATCCTG GCAAAAGATTTAATGGTCTAACTTTAGTTGTTGAGTCCTTTAATACCTTTTAGGACCACGTGGAAAGATATGTCACCATA AAAGTTGGAAATTTAGCTTTACCTATAAAAAAGTTCATCTTTTCTGCTTAACTTTTGAGTCAAGGATTGGAACTTTTGAT ATGAATCTTTGAAACAGTCTGTGTGGGTCATTGTCAAGGTTATCATTGCGTACACGTTGTCTATCACTCTTATCTGTATT CCTAGGGTGAGAGAGATCATATATGATCATGTGGTTAAGAGCACTCACTTGGGGGAAGATTTTCTTGTCCTTTTAAAGAT AAGCTTTCTTCAAAGAGGGACTTAACTGATCAATTACTACAATATGTTTAAGGGTAAAAGTTAAGGTAAAAAATTCACAG TTCAGATTTCAAAACATTTTGAAAAATAAAACTGATCCAAAGGTACTGATAACTCTGTAGGGAAAGATGCGATCAATGTT GCTAACATGTTTGGAATAAGGTTTGGCTTGGGTTAATGGAAGGATACTACTTAATTTGGATTTTTCCAATGAACTAAACA TGGCTTCACGTGACTTATGTGTGTCTGTAAGAGTACCATTCTTTGGTACCAAGCATATGTATCAAGTAAGTTACAAAAGA GGTTTAACCAATCAGGTGTTTGTTAGAACATGAAGGGGGGATAAAAAAATACAAAAATAGAATAGAAATGCCATCAAAAC TCAGTTTTTTCATACACACTTTGTCCATTTGTTCCTTTTTTATAGCACTTAGCTATATGTAATAGGGAGATGGGAGCTTA TAGAATTTATGAATTGGGTGAAAATCATGAAATTTTGTCTTGTAAGTACATTCTAGAATTTGCTTTTGAAGCCTAATTCT ATAACGGCATATATTATTTTTCCATAACTTTAATTTGCTTTATTTACATGTTAGTGTTACTACTTCACTTGTCAATTAAT AAAGACCTGTAGCCTTAGATCCTTATGCTTCAAGATCTAGTTGATAATAATACCTGAAGTTTTTCTACAAGTTTTAACTG ATATTCTCCCTTATGTGGGATTATAGGTTTCCACCAATGCAGATGGGGATATCACAACTTATCAGTGGTAGAAGATGTTG TGGAGAGTTACAAGAAGGCTCAAATCCCACTTGATGTGATCTGGAACGATGATGATCACATGGATGGACACAAGGACTTC ACTCTCAACCCAAACAACTACCCTCGTCCAAAGCTTTTGAACTTCCTCAACAAGATACACAGTATTGGCATGAAATACAT TGTCATTATTGACCCCGGAATTGGTGTTAACTCCAGTTATGGTGTATACACGAGGGGATTAGCTAATGATGTATTTATCA AGTATGAAGGTGAACCTTACTTGGCTCAAGTTTGGCCAGGGGCAGTTAACTTCCCTGATTTTCTCAATCCAAAGACAGTT TCTTGGTGGGGTGATGAAATCCGTCGCTTCCATGAACTCGTTCCTGTTGATGGCCTATGGATTGATATGAATGAAGCTTC AAATTTCTGTTCTGGAAAGTGCAAAATTCCTAAGGGAAAGGTGTGCCCTAGTGGAACAGGACCTGGATGGGTATGTTGCC TGGACTGCAAGAACATTACCAAAACCCGGTGGGACGATCCTCCCTACAAAATAAACGCCTCAGGAATACAAGCTCCTATT GGATACAAGACAATAGCCACCAGTGCAGTCCACTACAACGGCGTTTTGGAGTATGATGCTCACAGCATTTATGGTTTCTC TCAATCCGTTGCAACTCACAAGGGGCTTCTAGGCCTTGAAGGCAAAAGGCCTTTTATTTTGTCGCGCTCAACTTATGTTG GTTCAGGCAAATATGCTGCACATTGGACTGGTGACAATCAGGGAACATGGGAGAATTTGAGGTACTCAATATCCACTATG ATTAATTTTGGTATCTTTGGGGTCCCAATGGTTGGCTCAGATATATGTGGGTTCTATCCACAACCTACTGAAGAACTATG CAATAGATGGATTGAAGTTGGTGCTTTCTACCCCTTCTCAAGGGATCATGCAAACTACTACTCCCCTAGACAAGAGCTTT ACCAATGGGAATCCGTAGCTCAGTCTGCTAGAAATGCTTTGGGTATAAGATACAAGATACTCCCATATCTTTACACCTTG AGCTATGAGGCTCATGTTAGTGGAGCCCCAATTGCAAGACCTCTTTTCTTCTCGTTTCCAACATACACTGAATGCTATGG CCTTAGCACCCAGTTCTTGCTGGGAAGCAGTCTCATGATTTCTCCAGTGCTTGAGCAGGGAAAAACACAGGTGAAAGCAC TCTTCCCTCCTGGTAGCTGGTACAGCTTGCTTGATTGGACCCATGCTATTACATCAAAGGATGGAATCTATGTTACTCTT GATGCTCCTCTGCACGTGGTGAATGTGCATTTATATCAGAATACCATTCTTCCAATGCAACAGGGTGGATTGATATCTAA GGATGCTAGAATGACACCCTTCAGCCTCATCGTAACTTTCCCATCTGGGGCAGCCGAAGGGGAAGCGAAAGGGAATCTTT TCCTTGATGAAGATGAACTACCAGAGATGAAGCTTGGAAATGGCTATTCTACCTACATTGATCTCTATGCAACTGTCAAA CAAGGTGGTGTGAAAGTTTGGTCAGATGTTCAAGAGGGTAAGTTTGCATTGGGTAAAGGTTGGGTTATTGAATCCATATC TGTGTTGGGGTTGGCTGGAAGTGGAGCAGTGTCTGCACTTGAGATAAATGGAATGCCAATAATGGGTATCTCTGATGTGA AAATTAGTACATCTGAACATAAGCACTTGGATGGTCAGGCAAATGGAGAAAGTAAGACCGTGATGGTAGCGCTGAAAGGC TTGAACATCCCTCTAGGGAAAAACTTTGCAATGACCTGGAGCATGGGATGATGATAGGTTGAGATTGTCTCTATCATGAA TTTGTAACTTTCTTGTGTCCTTTTTGTTTTCTACAATTCTTGTAGCAGTTGTGAGGGAGAGAGATGAGCTAGAATTATGT TATGCTCGTCCTTTTTCATTTTAGCAAGCCAAGGCAACAAGCCTTGTGAGGTGAAATCTGAAAGTTGTTGTAGTCTTTAG GTGCCTGAACTGAAACTTCTTGTCATTCCAGTGATTTAGGATTATTCCTTCCATACAACTGTTGTAATCCTACATCCTCC AATCTTCCCAATAATAAAGCAAACATATTTAGTATATAAATCTAGTCATTACATCCTGGATGTAACTACTTTGAATTTAT ATATAGAGAAATGTTAGCAACATTGTCTTGTTTTTTGTCAGAAATTTCATCTACAAAGACGTTGATATAGTTTAGATTGA GAATATTACTAAACATGCTTGACGTTAATCACATGGCATTGCAAGTTAACTTGTCCCTCGCATCACTACATTGATAGGAT ATGCATGAAAAATGCTTCTTTTCTTTCTGATTTCTTGAAAGCAACCGCGAGTAAAATCAAGTACTGAAAGGTCCAC
CDS sequence (LotjaGi2g1v0277800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGTTTCCCCTCACCGCTTAGCTTCTCTGTGCCTCTCTTCTCTCCTCTTAACTCTGTTTCTATGTGCAGCTGTAGC TACCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCAAATGCCACCAAAATAGGCCTAGGCTACAGCCTTATCT CCATTGAAGAAACCCCAGATGGAGGCCTTATAGGTCTTCTTCAAGTCAAGAAGAAAACCAAAACCTATGGCCCTGACATC CCCCTTCTACGGTTCTATGTCAAGCATGAAACTGATAATCGTTTGAGGGTTCACATCACTGATGCTAACAAGCAAAGATG GGAAGTTCCCTACAATCTTCTACCAAGAGAGCAACCACCAGCTTTAACTCAAACCATTGGAAGGTTCAAGAAGAATCCTA TTACAGTCTCAGAGTACTCTGGCTCTGAGCTTCTGTTTAGCTATACTTCTGACCCTTTTACCTTCAAGGTGAAAAGGAAG TCAAATGGTGAGACCCTTTTTGATTCTAGCTCAGGTGATTCAGACCCTTTTAGCTCCCTGGTTTTCAAGGACCAGTACCT TGAGATTTCCACCAAATTGCCTAAAGATGCTTCCTTGTATGGTTTGGGAGAGAACACACAGCCTCATGGGATTAAGTTGT ATCCCCATGATCCTTACACTTTGTATACCACTGATATATCAGCTATTAATCTCAATGCTGATCTGTATGGATCACACCCT ATGTACATGGATCTTAGAAATGCAGGTGGTAAAGCTTCTGCACATGCTGTTTTGTTGCTCAATAGCAATGGAATGGATGT TTTTTACACAGGAACCTCTTTGACATACAAGGTTATTGGAGGTGTATTTGATTTTTACTTCTTTTCTGGTCCTTCGCCTT TGAGTGTTGTTGATCAGTACACTTCTTTGATTGGAAGACCAGCTCCAATGCCTTACTGGGCTTTTGGTTTCCACCAATGC AGATGGGGATATCACAACTTATCAGTGGTAGAAGATGTTGTGGAGAGTTACAAGAAGGCTCAAATCCCACTTGATGTGAT CTGGAACGATGATGATCACATGGATGGACACAAGGACTTCACTCTCAACCCAAACAACTACCCTCGTCCAAAGCTTTTGA ACTTCCTCAACAAGATACACAGTATTGGCATGAAATACATTGTCATTATTGACCCCGGAATTGGTGTTAACTCCAGTTAT GGTGTATACACGAGGGGATTAGCTAATGATGTATTTATCAAGTATGAAGGTGAACCTTACTTGGCTCAAGTTTGGCCAGG GGCAGTTAACTTCCCTGATTTTCTCAATCCAAAGACAGTTTCTTGGTGGGGTGATGAAATCCGTCGCTTCCATGAACTCG TTCCTGTTGATGGCCTATGGATTGATATGAATGAAGCTTCAAATTTCTGTTCTGGAAAGTGCAAAATTCCTAAGGGAAAG GTGTGCCCTAGTGGAACAGGACCTGGATGGGTATGTTGCCTGGACTGCAAGAACATTACCAAAACCCGGTGGGACGATCC TCCCTACAAAATAAACGCCTCAGGAATACAAGCTCCTATTGGATACAAGACAATAGCCACCAGTGCAGTCCACTACAACG GCGTTTTGGAGTATGATGCTCACAGCATTTATGGTTTCTCTCAATCCGTTGCAACTCACAAGGGGCTTCTAGGCCTTGAA GGCAAAAGGCCTTTTATTTTGTCGCGCTCAACTTATGTTGGTTCAGGCAAATATGCTGCACATTGGACTGGTGACAATCA GGGAACATGGGAGAATTTGAGGTACTCAATATCCACTATGATTAATTTTGGTATCTTTGGGGTCCCAATGGTTGGCTCAG ATATATGTGGGTTCTATCCACAACCTACTGAAGAACTATGCAATAGATGGATTGAAGTTGGTGCTTTCTACCCCTTCTCA AGGGATCATGCAAACTACTACTCCCCTAGACAAGAGCTTTACCAATGGGAATCCGTAGCTCAGTCTGCTAGAAATGCTTT GGGTATAAGATACAAGATACTCCCATATCTTTACACCTTGAGCTATGAGGCTCATGTTAGTGGAGCCCCAATTGCAAGAC CTCTTTTCTTCTCGTTTCCAACATACACTGAATGCTATGGCCTTAGCACCCAGTTCTTGCTGGGAAGCAGTCTCATGATT TCTCCAGTGCTTGAGCAGGGAAAAACACAGGTGAAAGCACTCTTCCCTCCTGGTAGCTGGTACAGCTTGCTTGATTGGAC CCATGCTATTACATCAAAGGATGGAATCTATGTTACTCTTGATGCTCCTCTGCACGTGGTGAATGTGCATTTATATCAGA ATACCATTCTTCCAATGCAACAGGGTGGATTGATATCTAAGGATGCTAGAATGACACCCTTCAGCCTCATCGTAACTTTC CCATCTGGGGCAGCCGAAGGGGAAGCGAAAGGGAATCTTTTCCTTGATGAAGATGAACTACCAGAGATGAAGCTTGGAAA TGGCTATTCTACCTACATTGATCTCTATGCAACTGTCAAACAAGGTGGTGTGAAAGTTTGGTCAGATGTTCAAGAGGGTA AGTTTGCATTGGGTAAAGGTTGGGTTATTGAATCCATATCTGTGTTGGGGTTGGCTGGAAGTGGAGCAGTGTCTGCACTT GAGATAAATGGAATGCCAATAATGGGTATCTCTGATGTGAAAATTAGTACATCTGAACATAAGCACTTGGATGGTCAGGC AAATGGAGAAAGTAAGACCGTGATGGTAGCGCTGAAAGGCTTGAACATCCCTCTAGGGAAAAACTTTGCAATGACCTGGA GCATGGGATGA
Protein sequence (LotjaGi2g1v0277800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVSPHRLASLCLSSLLLTLFLCAAVATSSSSSSSSSSSSSNATKIGLGYSLISIEETPDGGLIGLLQVKKKTKTYGPDI PLLRFYVKHETDNRLRVHITDANKQRWEVPYNLLPREQPPALTQTIGRFKKNPITVSEYSGSELLFSYTSDPFTFKVKRK SNGETLFDSSSGDSDPFSSLVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPHDPYTLYTTDISAINLNADLYGSHP MYMDLRNAGGKASAHAVLLLNSNGMDVFYTGTSLTYKVIGGVFDFYFFSGPSPLSVVDQYTSLIGRPAPMPYWAFGFHQC RWGYHNLSVVEDVVESYKKAQIPLDVIWNDDDHMDGHKDFTLNPNNYPRPKLLNFLNKIHSIGMKYIVIIDPGIGVNSSY GVYTRGLANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCSGKCKIPKGK VCPSGTGPGWVCCLDCKNITKTRWDDPPYKINASGIQAPIGYKTIATSAVHYNGVLEYDAHSIYGFSQSVATHKGLLGLE GKRPFILSRSTYVGSGKYAAHWTGDNQGTWENLRYSISTMINFGIFGVPMVGSDICGFYPQPTEELCNRWIEVGAFYPFS RDHANYYSPRQELYQWESVAQSARNALGIRYKILPYLYTLSYEAHVSGAPIARPLFFSFPTYTECYGLSTQFLLGSSLMI SPVLEQGKTQVKALFPPGSWYSLLDWTHAITSKDGIYVTLDAPLHVVNVHLYQNTILPMQQGGLISKDARMTPFSLIVTF PSGAAEGEAKGNLFLDEDELPEMKLGNGYSTYIDLYATVKQGGVKVWSDVQEGKFALGKGWVIESISVLGLAGSGAVSAL EINGMPIMGISDVKISTSEHKHLDGQANGESKTVMVALKGLNIPLGKNFAMTWSMG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 33 | 33 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 8 | 23 | 16 | - | – | |
| PANTHER | 9 | 934 | 926 | 0.0 | – | |
| PANTHER | 9 | 934 | 926 | 0.0 | – | |
| Phobius | 24 | 31 | 8 | - | – | |
| Phobius | 32 | 936 | 905 | - | – | |
| Gene3D | 44 | 306 | 263 | 6.5E-82 | – | |
| SUPERFAMILY | 46 | 293 | 248 | 4.39E-42 | ||
| Pfam | 66 | 194 | 129 | 1.1E-35 | ||
| CDD | 187 | 305 | 119 | 4.62543E-24 | – | |
| Pfam | 197 | 265 | 69 | 8.9E-7 | ||
| Pfam | 286 | 777 | 492 | 1.1E-148 | ||
| SUPERFAMILY | 296 | 688 | 393 | 5.79E-86 | ||
| CDD | 305 | 685 | 381 | 0.0 | – | |
| Gene3D | 307 | 672 | 366 | 1.5E-146 | – | |
| ProSitePatterns | 458 | 465 | 8 | - | ||
| Gene3D | 673 | 773 | 101 | 1.7E-33 | ||
| SUPERFAMILY | 690 | 770 | 81 | 3.96E-16 | – | |
| Gene3D | 775 | 936 | 162 | 7.6E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi2g1v0277800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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