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LotjaGi2g1v0281700.1

Overview

Field Value
Gene ID LotjaGi2g1v0281700
Transcript ID LotjaGi2g1v0281700.1
Lotus japonicus genome version Gifu v1.2
Description Leucoanthocyanidin reductase; TAIR: AT1G75290.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q84V83|LAR_DESUN Leucoanthocyanidin reductase; TrEMBL-Plants: tr|A1XEF7|A1XEF7_LOTCO Leucoanthocyanidin reductase LAR1-2; Found in the gene: LotjaGi2g1v0281700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:75422569..75427522) extracted from Lotus japonicus Gifu genome v1.2.

ATGAAGGTGTTCATACTGAGGAACAATAACGGTAAATCATTTACCGATTGGTATTTTGACATCGGCAAATCATTTACCGA TGGGTAGTTTTGGAATAAAAAAAAAATGCTGGGGCGCGTAGCCTAAAGGGTGGGGTGCCAAACCCAAATCCCCGTGTGAT CCCAGCTATCAGTCAAACAGAGCAGTATCGAGACACTGAGAGCTAAACTTCAAATTTTTTTTACAAACTCGTTATCATCC TAACTTGTGTCACCACCTTCTAGTGTTGAAGAGTAGATGAAAATTGTAATTGGCACGATTTGCGAGAACAGAACAACATT AATTTCTATAACCATAAGTCCATAATAGAACCATAAACCCCTATATAAACCATACCACCTTCATCGCTATATACTGCATA CCATACACTCAGTAATATTTTTTCACACTCTTAGTGTGTGTGTGTGAGTGAGTGAGTGAGGCAAAACTCTGTCTGCTACC AAAATAGCCAAAGATGGTGTCAACGGCAGCCACTCCTCCGGCAACCGCAGGCCGAATACTGATCATCGGAGCAACCGGTT TCATGGGTCAGTTCATGACCAAGGCAAGTCTTGGCCTTGGACGCTCCACCTATCTGCTTCTAAGGCCAGGGTCTCTCACT CCCTCCAAGGCTGCCATTGTCAAAAGCTTTCAAGACAGGGGTGCTAAAGTCATTCATGTAAGTCAAACTCACTATACTAG TTGAGGTATTTGTAGAGAATTCTAGTGTAATTTTTTTTGGTACATAAATTCTAGTGTAATTTGAAGTCTCGTATTTATTA ATAATATGCGAGATGACATTATTCATTAAAAATAGAGTTTAATGGATATGCACTGATAGTGTAAAATAGTTTTACACAGT CATCCAATCAAAGCATGCTACATAGGAGAGATAATTACATTTGACTTTAATTTTAATTAAAAGAATAATATATTTTCTGA TTTGGCGGAATTCAATTGGATGTCTGTTTAAAACTATTTTACACTGTCAGTGCATATCCATTAAACTCTTAAAAATACTA CCTTTTTACTCATTTATTTTATGGTCCAAAATAAAATAAAACAGCTCTGTACATTTCTCTCATGATATTTCATGTTACTT TTTATTTTTTAAAATACACTTTTATAATTTACAATATAGTCATACTATTTTAAAAAGTAGGTTTAATGGTACAGTGAAGT CAGTTACAAGCTCATCCCTCTTGTGTGGTATGCTGAAGGAAGATCGGTAAATATTAGTACCTAGTCTCTGAAAGGGAGTT GACAAGACCCACGTCTTCAAGAATTTTTATTTCTCGACCGACTATATGTATTTTTAAATAGATTTATTTTTCATTATTGT ATAGTTCAGCCACCAAAGATTTTATAATTTTTTAAAAAATTTATTCTAACCCTCCAAAAAAAAATCGTGTATAAACCTTT GCCTTGTGAGTGTGTAGACCTTAGAGAGAAGAAATGTGATATGATATGTGACTGAATGAGAGAGATAAAAAAAATCAAAA TATTTGATCAAAGACACATTCTTTAACTAATGGTACACGTATCATTACTAAAGGAAGATATTGATTATCCATTAATTTCC TTTATAGCCCATGATGTTTTTTTTTTCCTATTCAGGGTCCATATCTTCATTTTAATATTTTTTATGTTGGTACTGTTTTA GGGTGATGGTTACTTGATTGTTACAAATCATGTTATACTTGGCAGGGTGTTATAAACGACAAGGAATTGATGGTGAAGAT TTTGAAAGACTACGAGATAGACGTTGTCATTTCACTCGTAGGTGGAGGAAATCTCATGGATCAGCGTACACTTGTGGACG CCATTAAGTCTGTAAAGACGGTCAAGGTCAACACAACACTTTCATTTATTTAGTATTTCATTTTTGGATATGCCTTAAAA AATAGATATGAAAATTTGGGTGATATAAGATTTATCTATTTTTTTAAACAAAATATTTATGAATAATAAGTAGTTGGCAC TCATTTTTGGGTGCTTACACTCAAATGACAATCCTAAAAAATATAAATAATAAATATGATAAATACTATGATTGATAGAA AAATAAAGATAGAAAGGAAAATAGAGCATCATGAAGTCTCAAGTGATGTTTAATAACATGAATTATATTTACTTGCTATG ATAAGTTTAGAGAGATTAAGAAGGCAAAATAGAAAAGGAATGTGAATTTGAGAAATGTAAAAAAGTGATGTGAGAAAAAT TTAAGCTTAATTCAGTTTTTTATCCCTAACGTTTACACCTGTTTTAGGGACCAAAAATTTTTGTGTTGAAAAGTCTTTGC TTACCTAACTACTGGATAACTGTACCGTTGCTTGGGTACATAAATACCTAATGGTACTCTCTACCTTGGGTACACAAATA ATTTTTCTGTTTTATTACAGTGGGCCTTGTTAGAAAAAGTCATTGAAAATGACAGAATGATCAATCCCCCTCATCACATT GTGCAAAATAATTACCTCAATATAAATCAATTGTATAATTAATTTCTGCCGGTGGCGTTCTAGTTTGTACTATCTTCGCT TTTATTTAATTGTTTGGAGAGAGAAAAAAACACACATTAAGAAATGTAGTTTATTTTGTTAATTTTTATAAAAGAAATAT TTATTTTTCTATTTTATCCTTTATGATGTATTTTATCTTTCATCCTTTATTTTTCTCATAAGAGTATTACTTGAAAAAAT ATTATTTAAAACTCTCCTAAAATGTTGAGTAGAGATATATAAGAATATTTTTTTTCCTTCTAAATAAACATTTAATAAGA AACGGATATAATACTTAATCTCTTAATTGTGCTTTTATTTATTGGGTGAAAATATACTCGAAAATGATCCCAAATTAACA TGTGATTTAGTTACTGATTGTGATTTGATGTAATGTAATTAAAATGTTGTAGAGGTTTTTGCCTTCAGAGTTTGGGCATG ATACAGACAGGGCTAATCCTGTGGAGCCAGGTCTAACAATGTACAAAGAGAAACGGTTGATTAGGCGATTGATTGAGGAA TCTGGGATTCCCTACACCTACATTTGTTGCAACTCCATTGCTTCTTGGCCATACCATGACAATTGCCACCCATCCAAGGT TCCCCCACCTCTGGACCAGTTTCTTATCTATGGTGATGGCTCTGTCAAAGGTATATATAACCAACAACCATCACTACTGA CTGACATCTCAATCTTTGTTTTCAAATAGCGTTTCATTTTTTGTTGTGACTAATGAAATTATTTCATATAAAATAATATA TAAATATGATATTTATTAACATATTTTTTTAGCGAAAATTTAAAGCATGTTGAATGCAGTTAGTTGTGGTTCATGCACAC ACCTGGGTTCTGCCATACGACATTTTCCTTTTTTTTATATATATATTTGGCATTATTGCATTGACTATACTAACATTCAT CTTTTAAAAGACATAAATGCATAATAATTGAGTGGATTAAGTAAAAACCAATTAACCTATGCGACAACATATGTGCTGTA CTGTCTTATGTATGCAGTTGGTCCCAGGCCCAGCTGGCAAAATAATAAATCATTTTGTCTATAAATAATAAATTATAGAA ATCTGGTACCCAGATTAAAAGAATTTCTTTAAGGAAAAATATGGTTCATGACTGAACTGTTTTTTTTTAACATGATTTAC TATGCAATTGCCCAAATTAATGAACCATTTTCTCTATAAACATGTAAGAAAATAATATAAAAAAAGTGATTGTTTCATAG TTATTATGAAATTTTTATTAGTGAAAACAGAACACATTGTCACACTTAAGGGGGAAAGTTAGCTAGGAGTAACTTTTTAT GTTTGGGGATATTATAATGATGTACTGTAAGATTTGATTCCCTACATTTGGGAGCATATGAATCAAATCTTGATTTACAA TGATGTACTATGTAGGCCATTTAGATGATGACTCATGCAAAAATTAACAATTTGTTCTGTTCTTGGAATCAATTATCACT AAAAACTAGATTTTGAAGTGTTTTTTTTTTATATATGTGCAGCATACTTTGTGGATGGCAATGATATTGGAAAGTTCACA ATGAAAGCCATTGATGATATCAGAACAAGGAACAAAAATGTTCATTTTCGACCCCCAAGCAACTGTTACAGCATCAATGA GCTTGCTTCTTTATGGGAAAAGATTATTGGTCGCAAAATCCCCAGAGCCATCGTTTCAGCTGAAGATCTTCTTGCTGCAG CTGCAGGTCTACAACTTTTATTTTTTCCTTATCAAAATTTCATTATAATTTACGGTTCGACAAACAACTTAGTTATTAAA TTAAATGCTTATGTTAGCAAGTTTTTATCGCATAAACGTTTATTCATTTGTGTGTAGAAAATTGTATCCCTCGAAGCATT GTAGCTGCGTTCACGCATGATATTTTCATCAATGGTTGCCAAATTAACTTCAGCATAGAGGGGCCTAATGACATTGAGAT TGGGACTCTGTATCCTGATGAAAAATTTCGATGCTTGGAAGAATGCTTCAAGGACTTTGTCCCCATGACCCATGACATGA ATGTTCATGTTGGAACAACTGAAATTAACAACAACAGGAAGTCTTTGGTAGAGGTAGCGCCAATCACTGCTATGGGCTGA AACACAATCAAGTTAATTATGATATTCCATTATTCACAGAATTTGGTGTGGCAGAAATTCATAATCAGAATCATATGATA AACCATTATGGTCTCATCACCCTGTTTATCTGCATTTACCTCAATAAGTTAATAAATTTCACCCTATTGAAGTTTGCTTT CATTATTCTAATAAATTCTGTATTATTGGTGTAAACCTTTGTAATATTTTCAGATTTACTACCATTGTGCATATGATTGG ATCATATGCTCCACATGCATGTATGGTTGAGAATTACTTGTGATTTAATTTAATGCCAGTGATTTTACTATGCC
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0281700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGTCAACGGCAGCCACTCCTCCGGCAACCGCAGGCCGAATACTGATCATCGGAGCAACCGGTTTCATGGGTCAGTT CATGACCAAGGCAAGTCTTGGCCTTGGACGCTCCACCTATCTGCTTCTAAGGCCAGGGTCTCTCACTCCCTCCAAGGCTG CCATTGTCAAAAGCTTTCAAGACAGGGGTGCTAAAGTCATTCATGGTGTTATAAACGACAAGGAATTGATGGTGAAGATT TTGAAAGACTACGAGATAGACGTTGTCATTTCACTCGTAGGTGGAGGAAATCTCATGGATCAGCGTACACTTGTGGACGC CATTAAGTCTGTAAAGACGGTCAAGAGGTTTTTGCCTTCAGAGTTTGGGCATGATACAGACAGGGCTAATCCTGTGGAGC CAGGTCTAACAATGTACAAAGAGAAACGGTTGATTAGGCGATTGATTGAGGAATCTGGGATTCCCTACACCTACATTTGT TGCAACTCCATTGCTTCTTGGCCATACCATGACAATTGCCACCCATCCAAGGTTCCCCCACCTCTGGACCAGTTTCTTAT CTATGGTGATGGCTCTGTCAAAGCATACTTTGTGGATGGCAATGATATTGGAAAGTTCACAATGAAAGCCATTGATGATA TCAGAACAAGGAACAAAAATGTTCATTTTCGACCCCCAAGCAACTGTTACAGCATCAATGAGCTTGCTTCTTTATGGGAA AAGATTATTGGTCGCAAAATCCCCAGAGCCATCGTTTCAGCTGAAGATCTTCTTGCTGCAGCTGCAGAAAATTGTATCCC TCGAAGCATTGTAGCTGCGTTCACGCATGATATTTTCATCAATGGTTGCCAAATTAACTTCAGCATAGAGGGGCCTAATG ACATTGAGATTGGGACTCTGTATCCTGATGAAAAATTTCGATGCTTGGAAGAATGCTTCAAGGACTTTGTCCCCATGACC CATGACATGAATGTTCATGTTGGAACAACTGAAATTAACAACAACAGGAAGTCTTTGGTAGAGGTAGCGCCAATCACTGC TATGGGCTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0281700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVSTAATPPATAGRILIIGATGFMGQFMTKASLGLGRSTYLLLRPGSLTPSKAAIVKSFQDRGAKVIHGVINDKELMVKI LKDYEIDVVISLVGGGNLMDQRTLVDAIKSVKTVKRFLPSEFGHDTDRANPVEPGLTMYKEKRLIRRLIEESGIPYTYIC CNSIASWPYHDNCHPSKVPPPLDQFLIYGDGSVKAYFVDGNDIGKFTMKAIDDIRTRNKNVHFRPPSNCYSINELASLWE KIIGRKIPRAIVSAEDLLAAAAENCIPRSIVAAFTHDIFINGCQINFSIEGPNDIEIGTLYPDEKFRCLEECFKDFVPMT HDMNVHVGTTEINNNRKSLVEVAPITAMG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43349:SF16
8 325 318 1.3E-168 –
PANTHER
PTHR43349
8 325 318 1.3E-168 –
SUPERFAMILY
SSF51735
13 260 248 1.0E-42
IPR036291
CDD
cd05259
14 282 269 7.12512E-66 –
Gene3D
G3DSA:3.40.50.720
14 303 290 1.1E-109 –
Pfam
PF05368
15 247 233 2.2E-52
IPR008030
Gene3D
G3DSA:3.90.25.10
163 311 149 1.1E-109 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0281700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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