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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0282400 |
| Transcript ID | LotjaGi2g1v0282400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxidoreductase/transition metal ion-binding protein, putative; TAIR: AT3G25680.1 SLH domain protein; Swiss-Prot: sp|Q6F6Q0|ILVD2_ACIAD Dihydroxy-acid dehydratase 2; TrEMBL-Plants: tr|G7JX25|G7JX25_MEDTR Uncharacterized protein; Found in the gene: LotjaGi2g1v0282400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:75489348..75494602) extracted from Lotus japonicus Gifu genome v1.2.
AAAACATTGGGTGAAACTAGTACAACAATTTTCAAGACAGGAACACACACTCCATACTCCAATTGAGGTTAGGTAGCACG GTGTCTGTCCCTGTAGTTACTCTACTCTCTCGCCGCTGCTCCTCCGTCAGCCACCGCGTCAGCCACCACCTTCCTCCTCC TCCATCCTAACCCTAACAATGTGGCCTCCTCCCACTTCTTCTTCAACAAACTCTTCCTTCTGCTTCCCCTTCCCTTCCAC TCTCTCTCATCGCCCCCTTTTCAACCCTCCTCATCGTCCCACCCAATTCCTCTTCCCCCGCCGCTTCCACCTCTCCGCTT CCCTCTCCCGCTCCGACGATCTCAACGGCTGGGCTATCCTCGACTCCCCTGCCCGCCCTACCACCACCCACAAAGGCTTT CCTTCGAATGCTGTAGTGGGTGTTGGCACTTCCCTCGCTCTTCTCCTTGCTCTATTTGGTACTTTCTCACTATCCAGGAA AGGTTCGTTTCTCTTACCTTTCACTTCCATGTGTGAACTAGTTTTTGGTGGTGTGAAATTGATGTGTGTTTTGGTTTGGT TTTTGATTAGGTTTCAATGTTCAACTCACGAGCCCGTTGCAAGCAATGTGGAGTAGTCCTATTGAAACTCGAGAGCATCG CGACAAGGTTGCTGAAGAGCTCCACATTTCTGATGAGGCCTCCCCTGAGGCTGTTTTGGAAACTGTTGCATTTGCCCCCT GTTAGTGTTACAATTACCGTGATTATGTTTTTATTTAAGTTTATGATGTTTACCAAGGGATCGAAGCATATGTCTCGTAT TGTGATTGTGTTCCTGTTAGTTTGTGTGTTGATGGACTTGTAATTCTGATTGGTCTGGGATTACTAACTTAAAACGCTTT TTTAATTATTCCTTTCTTAGTTTGGCAATTTTGTGTTTAGGATTAGGCTTGAGTAGCCTTGTGTTTATAGTGGTTTCTTG CAATGTCCTCATCTTGTTGTTGTTACTATCAGCAACTGTAGAAAAGTTTGAACGTGTTGCGGTTCCAGTTTCTGTGGATT CTACCCAGGAAGAAGCATTGTCTGTCTTAAAAACACTCAAGGTTTGTTTCTTTGAGCAATATTTTTATGAATCAGTGACA CTGCTAGTATCCATCTACATTGTGTTAATGGTCTGCATAACCATTTATTGAACCACTACTTATTGGAAGTCTGGAAGGGT TCATTTATGTATCAACCATATTAGCTAGGAACAGGGCCGAAACCTTGTATAGATGATAATAATCCCACAAACATTATTAG TTATTTTCTTTGGTATACAAATATTTGGGCCCATTTGTTTAAGCTTAAGAAAAATTGATTTAGTTTTTAGAGATTTTACG TAAAAAGTAGAAGGTACTTTTTGTTTGGTTACAATTCTTTGACTCGTGAACCTTAGGTCTTCGACTTATTTAGTTTGTAA ACACTGCTTGAGTCATTTGTTATGATTGTGGTTATGCTGCTTAAGTTTTTAGCGGATGTATGCTAAAAAATAAAGCAAGC AAGAACTGAGGGAGAGAGCCAGTGAAATTTTGATGTATGTAGTATATCGTTTTAGTTAAGAATGATACTCACAAAGTTTG ATTTGGTTTACCTCCAGAGAACTTTTGATGCAGTTTGACATTTATGTTATGGTGTACTTAAACTTGTACTGCTTAGTTCT TACATGGAATATGCTCTTGTATATTTGTATGTTCCATTATGCAGCACTAAAACTACGTGCTATTATTTTGGAACCTTGGG TAGAATCGTAGACATGAAACTAGTAGTTTTTGCTGATTGATCTAGATAATTGAAGATGATGTGGAAGGTAATGAGCTGTG TACACGAAGAGAATTTGCTAGATGGCTAGTTAGATTGAATTCTTCTTTAGAAAGGTGCGTTCATAATGCATCATGCATGT CCCTTTACAATCAGTGATTGGTTTAAAGCTAAAAATGTACCTTTGCCTGGCTTTCATCAACAACTGGTTTCTTTATCTTC CAGGAATCTAGAATACAGGATTGCCCCAGTACTATCACTTTCTGGATCTGTAGTTACTGCATTTGATGATGTTAGTGTTG AAGACTCAGATTTTCGATACATTGAAGGTAAAAATGATGAAACTCCGACCCAAAATGTTTGTTTCTTGGAATCAGAAATT GAATTTTTTTTTTTCAATTTGAGGTTGAAGTTTTAGCAGAAGCCGGTGTGGTCCCCAGCAAATTATCTTGGAAGAATAGT TCCAATTCTGGTGGATCTGACAGTGAAGAAAACATAAGTTTTTTTCCTGACAGGTGAATTCGTGTGCCATCCCTCTTCTA CACTTCTCAATCGTATGCCATTTTACTGAATAGGAAATATGTGCACTGTAGATTCATTTCACGACTAGATCTGATAGACT GGAGAGCTCAGTTGGAGTATAAATTTTTCTTTGGGTCAATTGACCAGGTAAGCTTTTTTCAGAATCTAATCATTTGAATA TTTATTAATTTGCATGATAAAATCTACCGCTTGTCTGTCAGCTCTTAAAACCTGACTTTTTTACAGTCCAGATATCAATT AAAAAAGCAGGTTATATGGATGTGAAGGAGATCACTTCTCTCGCAGTTTATGTGGACATCTTGGCAGGGGATAGGAGCAT ACTCAGAAAAGTATTTGGTATCATTTCTCTAGCTTTTCCTCCATGCAATGATGCTTTTTTTGTCTGTCTGACAATGACAA ACTGGTTAAGCAAATCAAATTTCTTTAGACTGTTATATTTGCAAGCATGCATGTTTTTTTTATATCTTTTATGTTTTCAA GGGTTATTGACCAATCATAGATGATCAGAAATTTTTCTTTTCATTTAAAGTTCACAGTAAATACAAATTCCAGTTTACGT ATGTTTCGCAATGGGAACAATGAAGGTTGTTGATATCAAATGTAGAACCACAGAAGCTTAACCAAATAAGTAACAAAATT GAACTCAAGAATTTTCAATACCCATTTTATGCTTATACCATGATGAGTAAATGAATGAAGAGTGAGGCTTGTTATATATC TTATCTTTGAACTGTGGATGGTCACTATTTAATTATTTATCTAGGAATGCCACACTGAAGAATGATCATATAAAGATTCT ACTGTGAACTAATTGTTACAGGACAGAGCAAGCGATTGCAGCCAAACAAACCTGCAACAAAAGCACAAGCAGCTGTGGCT CTGACAAGTGGCAGGATGATGGAAGCAATATCTGCTGAATTGTTAAGAATAGAAGCTGAAAATTCTGCTCGGCAAGCTGC GGCAGAAGAGATCAGGTCTGAGTTGCTTAGCCGAGGAGACATACAGAAGTTTTGGGATTTGAAGCTTAGTGAAGAGAAAA GTCGTGGTTTTGATGCAGAGAGGCTTTATCTCGATGCAGTAAACAATTTGGAAGAAGAAACAATCAATCAAGATAAGATA CATGCTGAGTATTTAAAAGAAAAGGAAGCAATGGATTGTCAAAAGCAACTGCTGCTTACTTTAAAGAAAGAAGTTGATGA GATATCAGAAAAGCTTGCATCAGAGAGAGTCATATATGTAGATGAGAAGCAGATTGTACATAAGTTGCTCAAAGATTTAG AGTTCAAGCATGAAGAAATGCTTGACACCAAATCCACACTGGAAGCTGAGAAAGAAGCTCTTCAGATTCTTAGGTAATTT ATGAATTGTTTGTTGTCTCCTTTTTGGCATAATTACTGTCATTTAGTGTAAAGTCAGCTATCCATTGGAATACTTTTTCG ATTTATGGTTTTCCAATTAGAATTCTGAAGGATTTTTCTGCATGATGGAAAACAGTCAAAACACATTTTTTTCAAGATTG ATTGATGGTTGAGTCAGATTTTGAGAGGGACATTTGGGTAGAGAGTAGAAACTAATCCTTATGTCTATAGCGTCTCTACC TAGCACAATCTGCCTCTAATTCCGTCCATGACCATGATCACGTCTTGTCTTGGGAATTCTACATTTTTAGAAACTTGTTT GGGAGGGAAGCTAGTGACACTTGATTTTCTTTTTTAAAAAGACTGAACATTGTCTCACTGAGGTCAGCAACGTGGGTCAA TTGATGCCATTGGGTTCTTTGGAAAACCAACGTGCCAATTAATAATTTAAGTGTTTTGTAATTATTTCTCTGCAAGTTTT CTTTGGTTCACATTGTGCATCTGAATTGTTTTCTCTTAGGCCAATCATGTCCAGGTTATTGACATTTCTTTTACCTCTAA TTCCATTCTTATATCTGGACTTCAGTTTTTGAAACTTGTTTGATCTAGAAGCTAGTGGCACATGATTTTTTTTTACGGCT ACAACAACCCAGTATGTCTCACTGTGTCTGTACATGGGTCAATTGATGTCCTTGGATTCTTTCGCAAGCCAATTTTTTTT ATAAAACCATTTAACATCAGCCATAAGGTGCTTTTTAATTATTTTTCTTAAAGTTTTCTCTTGTTCTCCTCGTGCATGTG AATTGTTTGCCCTTGTGGGCAACCATGCTCCAGGTTAGTGACTTAGTGTTATGTCTAGTGATGTCCTGTCTTTGGATGCA AATATATGCATAACCAAGCATTGAAGTGTGGAATGATCTAGTGCAGGATGAGTTAAGTTTCTGGCACGTCTTGATCTTGT AGTATTAAAAAAACATAAATCAGTCATTAGAAAGTCATCATTTGATGCATAAATTAGTGAATCTGCTAGAAATTGTGGAT GTATTTTGAATTGGGTGTCTGATGAAGAGTGCAAATGTTGCAGATCTTGGGTGGAGGACGAGGCAAGAAGAAGCCAAGCT CGGGCAGCTGTTCTTGAAGAGGTAGCGCGAAGATGGAAATGGGATGACCAAGCTTGAGAGTTATAGGGGATGCGTCCTTT AAATGTAAATTATTATCTTTTATTTACTGATAGCACAAATTCTTTAGGGTTCAATGGTCTGTTTGGTTTGGTCTTCAGGG AGAGAGGAAAGGACTGAGGCTGGTAATTAGCCTCATCCTTCTTTTGGTATACACATATTAAAAGGGGAAAGGAAGAGATT TCAGTGGGCTCCAAAGATTTTTCCACCCCTCTCGTGGGATTGGTTGGGGGTGAAGAAAGTGGAAATGCAGCTAATGTTTT CTTTATCTGTTTGTGGTTCCTGTTTTAACTATTTCAAATCTTGGATGCTTTAGAAAATTCTGTTTCAACTATTATAGAAA TAAGAATGACAAGAATGACGTTTTACAGTTATACATTTGTATCTGCATAGTTTTA
CDS sequence (LotjaGi2g1v0282400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGCCTCCTCCCACTTCTTCTTCAACAAACTCTTCCTTCTGCTTCCCCTTCCCTTCCACTCTCTCTCATCGCCCCCT TTTCAACCCTCCTCATCGTCCCACCCAATTCCTCTTCCCCCGCCGCTTCCACCTCTCCGCTTCCCTCTCCCGCTCCGACG ATCTCAACGGCTGGGCTATCCTCGACTCCCCTGCCCGCCCTACCACCACCCACAAAGGCTTTCCTTCGAATGCTGTAGTG GGTGTTGGCACTTCCCTCGCTCTTCTCCTTGCTCTATTTGGTACTTTCTCACTATCCAGGAAAGGTTTCAATGTTCAACT CACGAGCCCGTTGCAAGCAATGTGGAGTAGTCCTATTGAAACTCGAGAGCATCGCGACAAGGTTGCTGAAGAGCTCCACA TTTCTGATGAGGCCTCCCCTGAGGCTGTTTTGGAAACTGTTGCATTTGCCCCCTCAACTGTAGAAAAGTTTGAACGTGTT GCGGTTCCAGTTTCTGTGGATTCTACCCAGGAAGAAGCATTGTCTGTCTTAAAAACACTCAAGATAATTGAAGATGATGT GGAAGGTAATGAGCTGTGTACACGAAGAGAATTTGCTAGATGGCTAGTTAGATTGAATTCTTCTTTAGAAAGGAATCTAG AATACAGGATTGCCCCAGTACTATCACTTTCTGGATCTGTAGTTACTGCATTTGATGATGTTAGTGTTGAAGACTCAGAT TTTCGATACATTGAAGTTTTAGCAGAAGCCGGTGTGGTCCCCAGCAAATTATCTTGGAAGAATAGTTCCAATTCTGGTGG ATCTGACAGTGAAGAAAACATAAGTTTTTTTCCTGACAGATTCATTTCACGACTAGATCTGATAGACTGGAGAGCTCAGT TGGAGTATAAATTTTTCTTTGGGTCAATTGACCAGATATCAATTAAAAAAGCAGGTTATATGGATGTGAAGGAGATCACT TCTCTCGCAGTTTATGTGGACATCTTGGCAGGGGATAGGAGCATACTCAGAAAAGTATTTGGACAGAGCAAGCGATTGCA GCCAAACAAACCTGCAACAAAAGCACAAGCAGCTGTGGCTCTGACAAGTGGCAGGATGATGGAAGCAATATCTGCTGAAT TGTTAAGAATAGAAGCTGAAAATTCTGCTCGGCAAGCTGCGGCAGAAGAGATCAGGTCTGAGTTGCTTAGCCGAGGAGAC ATACAGAAGTTTTGGGATTTGAAGCTTAGTGAAGAGAAAAGTCGTGGTTTTGATGCAGAGAGGCTTTATCTCGATGCAGT AAACAATTTGGAAGAAGAAACAATCAATCAAGATAAGATACATGCTGAGTATTTAAAAGAAAAGGAAGCAATGGATTGTC AAAAGCAACTGCTGCTTACTTTAAAGAAAGAAGTTGATGAGATATCAGAAAAGCTTGCATCAGAGAGAGTCATATATGTA GATGAGAAGCAGATTGTACATAAGTTGCTCAAAGATTTAGAGTTCAAGCATGAAGAAATGCTTGACACCAAATCCACACT GGAAGCTGAGAAAGAAGCTCTTCAGATTCTTAGATCTTGGGTGGAGGACGAGGCAAGAAGAAGCCAAGCTCGGGCAGCTG TTCTTGAAGAGGTAGCGCGAAGATGGAAATGGGATGACCAAGCTTGA
Protein sequence (LotjaGi2g1v0282400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWPPPTSSSTNSSFCFPFPSTLSHRPLFNPPHRPTQFLFPRRFHLSASLSRSDDLNGWAILDSPARPTTTHKGFPSNAVV GVGTSLALLLALFGTFSLSRKGFNVQLTSPLQAMWSSPIETREHRDKVAEELHISDEASPEAVLETVAFAPSTVEKFERV AVPVSVDSTQEEALSVLKTLKIIEDDVEGNELCTRREFARWLVRLNSSLERNLEYRIAPVLSLSGSVVTAFDDVSVEDSD FRYIEVLAEAGVVPSKLSWKNSSNSGGSDSEENISFFPDRFISRLDLIDWRAQLEYKFFFGSIDQISIKKAGYMDVKEIT SLAVYVDILAGDRSILRKVFGQSKRLQPNKPATKAQAAVALTSGRMMEAISAELLRIEAENSARQAAAEEIRSELLSRGD IQKFWDLKLSEEKSRGFDAERLYLDAVNNLEEETINQDKIHAEYLKEKEAMDCQKQLLLTLKKEVDEISEKLASERVIYV DEKQIVHKLLKDLEFKHEEMLDTKSTLEAEKEALQILRSWVEDEARRSQARAAVLEEVARRWKWDDQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 77 | 77 | - | – | |
| PANTHER | 50 | 547 | 498 | 2.7E-217 | – | |
| PANTHER | 50 | 547 | 498 | 2.7E-217 | – | |
| Phobius | 78 | 98 | 21 | - | – | |
| Phobius | 99 | 548 | 450 | - | – | |
| Coils | 451 | 471 | 21 | - | – | |
| Coils | 490 | 517 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0282400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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