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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0283300 |
| Transcript ID | LotjaGi2g1v0283300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein MIZU-KUSSEI 1; TAIR: AT3G25640.2 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617); Swiss-Prot: sp|O22227|MIZ1_ARATH Protein MIZU-KUSSEI 1; TrEMBL-Plants: tr|I1J6S7|I1J6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0283300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:75571172..75574015) extracted from Lotus japonicus Gifu genome v1.2.
AACATTGGAGGCTAGCTGATCCTAATCTGTAGCCGGTTTTGTTTGTGAAAGGATAGATGCGCGGAACACAATGGTGGCTA AAGGCATCGGTGCAGGGTGGCTTGGTGGGAGGGAGGGAGCATGAACCTTGAAATGACTGCAGAAAGGTTGTGCTGTGTGT GTGGTGGTCCAGTGTTGGGTATGGTTGGTGTGTTCTCACCTGCCCTGAACTGTTTCCAATGTAAGTCACAGTAATCAGTC CTTCTTCCTGTGCCCCCACTTTTGACAATGAAATCACACCAAAAGCTTGTCTCTTTTTGTGCTACTTTCACTCTGCATAC AAACACCAAACCCACGTCACATCTGCTTGATCACCTCTCTATTCCATGATCTCTCAAGTCTCAACGTATAGGTACACGGT GAAAACTTATGATAAAAGCAAAAGCACGGTATTCATGAGCAAAAATTCAGGAAAATCACTTCTATTCATCACAATTCTAG CTACTCATATTACGTTTGGTCTACAAAACTTATTGTATGTAATTCTAGCGAAATGGATGAGGGGAGCAAAATTTTATCAC ATCATGCAAAATGAATAATGCTAAGTATATAAGATTGTAAAAAATTTTAAGGGTTAGTATACTACTTTGTTGAGGAATTT TTTTCTTTTCAAGGCACTCTTGCAATTTTAGAGACACTTGGGGTTTGTCCCTGTTTGGATTGATGAGATGAAATGGTGTG AATATGTGATGAAATGGATGGTGCCCAACACTCAACTCATCCACCTAATGCTTTAGGATCACATTAATTGAATATGTATA TCATAATAAATCATTCTCCACACACATCATCTATGAATCAAATTTTGAACTAAATATTTAAAACGTTCAACAATCTACCA ACTATATTAGATTTTATTATTATCAATATAAAAAAATATACTATTGGTTATGCTGATGCAGCATTTCATTCCATTTTCTT TTATTATATTTCACTATATTAGCTAGTCTTGAGAGGTCCCAAATCCCAATAGTAATTTTGTTGTTTTTGTGACTCTGGCC CCCCAAAATCCCCATTTCCTTATTCCCAACAGGTAGGTGGGGCTGCTTACCTTCCTTCTGTCAGATCCTCTACTCTCTTG CCTGTCCTTCAGTATCACAACCCCTGACAAAAAGGTGTTAGAGGAGAAGAATAAATCACCCATTTAACACACCACCCATA ATTCACTAAAACAAACCAATACTCCAAACAGAATCAAATGCCCGTCATTATTCTCATTCTCATTCTCCCTTTTTCTTCTA CTTCACCCTCATACATATAACTCATAAAAATCCCACCTATTGAAAACTCCCTCTTTTGCCATCACAAATCATGAAGACCA TAATGGCCGCTAAATCCCCTCATGACTCTTCACTCTCCTTCTCCAGAAGGTACTTCCATTGGAAGAAGAAGCCTTCAGAT GAAGATGATGAGGAAGAAATCCTCAACAACCTCAGCTCATCCTCACATTACCCTGAAGATGATGATCACAAAGAAGAACA TGATCCTCATCACAAACTCAGAATCCAAATGCAAGCTGAACTAGCTGCTGTTTTACCAGCAGAGGAGAAGAAGAAGAAGA ATCACTCCAACTCCAAGTCCAGGTTCAAATCAGCTCTCACAGTCTTCACCAAGAGCCGCTCACTCCACAGCTCCGGCCAC CTCGGCACGCGCGTGGTGGGCACGCTCTTCGGCTACCGTCGCGGCCATGTCCATTTCGCATTCCAGGAGGATCCAAAGCT CAGCCCTGCGTTCTTAATCGAGCTAGCAACACCCACAAGCGTTTTGGTGAGGGAAATGGCTTCTGGGCTGGTGAGAATCG CGTTGGAGTGTGAGAAGAAACCAGGGACAGGGACAGGGAGCAAAAAGGGTGTGAAGCTGTTGGAGGAACCGCTATGGAGG ACGTACTGCAATGGAAGAAAATGTGGGTATGCGAACAGGCGTGAATGTGGGCCGGAGGAGTGGAAGATTTTGAAGGCGGT GGAGCCGATTTCAATGGGTGCCGGCGTGTTGCCGGTGCCGGAAAATGGGAATGGAGCTGGTGGGTCCGAGTCTGAAGGTG AGATCATGTATATGAGAGCTAGGTATGAGAGGGTTGTAGGGTCTAAGGACTCTGAAGCTTTCTACATGATGAACCCTGAT GGGAGTGGGGGACCTGAGCTCAGCATTTACTTGCTTAGAGTTTAACCATAGTTTAATTTCATGGTGCTTCAATTTAATTA TATGGTTTCTACATGATCATGTAATTTTGATGAATGTGTTTGGTAATGAGGTGTAAAGAAGGTGAGGGACTCTGCATAAT TTCCCAGTTTTCTTTTACCTTTTGAAATTTGGTTGGTGGTGTTTTGGATTTGAAATTGGTGAGTCAAGTGTATTGAATTA ATGGATTCCAAACTTGAGCTGGAAATTGTATGATTTCTTTCATTTTGGAATGCAGAAGGTAAATGAATATGCAGTGTAGA AAGAGGTTGTTTGCTATGTCTTTTTAATTTTTATTTAGTTGGAAATTGGAATAGAGCTTGGATTTCCTAGCAATGATATC AGTTGGTTTCTACTATAAGAAGGAAAAAGTTGTGTTTCTTCAAAATTTCAGCAATGGGATAAGGCTGCATTATATTAGCA ACACTGTTCTTTTGAAAAAGTGAATTTACTTTATAGCCTGGGATGAGATAGAATTGATTGATGAACAAGAAAGAAACTCA TATATCAATGTCTGGGTTGCTCACAACACAAGCTAATGCTATCTACTATCTAGTAATTATTTTTGCTTGGATTTTACATT TTAATTTTTGATGAACCACTAATTTGTAAAAGGATACAGGGAGC
CDS sequence (LotjaGi2g1v0283300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGACCATAATGGCCGCTAAATCCCCTCATGACTCTTCACTCTCCTTCTCCAGAAGGTACTTCCATTGGAAGAAGAA GCCTTCAGATGAAGATGATGAGGAAGAAATCCTCAACAACCTCAGCTCATCCTCACATTACCCTGAAGATGATGATCACA AAGAAGAACATGATCCTCATCACAAACTCAGAATCCAAATGCAAGCTGAACTAGCTGCTGTTTTACCAGCAGAGGAGAAG AAGAAGAAGAATCACTCCAACTCCAAGTCCAGGTTCAAATCAGCTCTCACAGTCTTCACCAAGAGCCGCTCACTCCACAG CTCCGGCCACCTCGGCACGCGCGTGGTGGGCACGCTCTTCGGCTACCGTCGCGGCCATGTCCATTTCGCATTCCAGGAGG ATCCAAAGCTCAGCCCTGCGTTCTTAATCGAGCTAGCAACACCCACAAGCGTTTTGGTGAGGGAAATGGCTTCTGGGCTG GTGAGAATCGCGTTGGAGTGTGAGAAGAAACCAGGGACAGGGACAGGGAGCAAAAAGGGTGTGAAGCTGTTGGAGGAACC GCTATGGAGGACGTACTGCAATGGAAGAAAATGTGGGTATGCGAACAGGCGTGAATGTGGGCCGGAGGAGTGGAAGATTT TGAAGGCGGTGGAGCCGATTTCAATGGGTGCCGGCGTGTTGCCGGTGCCGGAAAATGGGAATGGAGCTGGTGGGTCCGAG TCTGAAGGTGAGATCATGTATATGAGAGCTAGGTATGAGAGGGTTGTAGGGTCTAAGGACTCTGAAGCTTTCTACATGAT GAACCCTGATGGGAGTGGGGGACCTGAGCTCAGCATTTACTTGCTTAGAGTTTAA
Protein sequence (LotjaGi2g1v0283300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKTIMAAKSPHDSSLSFSRRYFHWKKKPSDEDDEEEILNNLSSSSHYPEDDDHKEEHDPHHKLRIQMQAELAAVLPAEEK KKKNHSNSKSRFKSALTVFTKSRSLHSSGHLGTRVVGTLFGYRRGHVHFAFQEDPKLSPAFLIELATPTSVLVREMASGL VRIALECEKKPGTGTGSKKGVKLLEEPLWRTYCNGRKCGYANRRECGPEEWKILKAVEPISMGAGVLPVPENGNGAGGSE SEGEIMYMRARYERVVGSKDSEAFYMMNPDGSGGPELSIYLLRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 284 | 284 | 5.7E-117 | – | |
| PANTHER | 1 | 284 | 284 | 5.7E-117 | ||
| MobiDBLite | 26 | 61 | 36 | - | – | |
| MobiDBLite | 46 | 61 | 16 | - | – | |
| Pfam | 115 | 283 | 169 | 1.1E-70 | ||
| TIGRFAM | 115 | 284 | 170 | 2.8E-67 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Hydrotropism | Growth or movement in a sessile organism toward or away from water, as of the roots of a plant. |
Expression pattern of LotjaGi2g1v0283300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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