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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0285600 |
| Transcript ID | LotjaGi2g1v0285600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF1262 family protein; TAIR: AT1G13520.1 hypothetical protein (DUF1262); Swiss-Prot: sp|P10565|BINB1_LYSSH Larvicidal toxin 51 kDa protein; TrEMBL-Plants: tr|A0A072UEA2|A0A072UEA2_MEDTR DUF1262 family protein; Found in the gene: LotjaGi2g1v0285600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:75871092..75874529) extracted from Lotus japonicus Gifu genome v1.2.
CTCCAATGTGATTAGACTAAGAACCAATTGAAGAATATACCAATATTCAGAACAACACATGGTCAATAGTCAAACGCGGT TTATCCTGTATTGTATTTGAAGATAGATATCTGAGACAAATGACCAATAATTCAATTCTTTGATTTCGATGAATTCAAAG TTGCATGTTTGACATTTATATCCAAAGATAAACAAGTACATGCTTCCATTCATCTATATATGTGTATGTGTACGTGGGGA TCGGAGCAAATTAAACAAACGAGCATTATCAAGGGAATACTTATACAACTGAGTTCAAGACCAGAGTGTTTGCTGAGAAA ATGTATGTAACAAGACTGCTTTCCATGTACAAAAGGAACCCCCATGCTCTTGTTGACCCACCTCCATCGGGTCCGAGTTC AGGTTATCTTGTAATCATGGATGAAGAATCTGAGACTTACAATTGTTTCGGTTGCAAGAATTCCAACATCAGCGATCTTC CTTTCCCTCAGAACAAAGACTTAACAATCGAGTTCAGATCAAGAATAGGTGAAAAAGACCACTATGAGTATGAAAAATCC ATGTTTGTTCCGGTATTGAATCAGCCCTTGTCTTCAAACCGCTACTACGTCATAAGAAGGAGAGGGAAGGAACAAGGGTA TGTATGAATCAATTCACTCTTATATTTAACCTGTATGTATGAACAGGGGTATGATCACTTTTCTATATCAATTAACCTGT ATTTATATTTTCACTTTTAGTCACCTTCAGAATTTTAACTACATATATAACCAGGCTCAGGTATAAATAACACCATGCTA ATTAACTGCTTCCAACTCTTAATGAGAAGATTGAGAAATGACATCTAATAGGGTTTCATGATATATAGATAACTGATCTT AGTTTTATATTTACTCAGCTAAGATTTTTAACTTCAAACCAGAAATAATTAATATTTATAGTGCCAAAAGCAATTGATAA TATTTCCATGAACATTTATTAGTAAAATAATTTTTACCCTTTTTTCTGCATGAGGTTATTTAAAATCATTCTACATGGAT CAATAGTGCATGCCTTTAAGTAAGCCGGTTAAAAATTTCACAGAATTCTACTTGATTATAAATAATTTTATTGTTCTAGA TGGTAAGGTTGACCAATAAATTTTCACACATCGTATGGAATTTTTTCTATACCAAACAATACAACGCTATATTTGATCTT TGACTTCAGTCTTTCATCTTATTTGAATGCTAGTTATAACATTCAAGTTAGTTTCTACATGATATATTAGTGAGTTTATA TGTAAAACAAATTTTGGGGACATAATCAACATGTTAGTGGGGTTTTTGATGGCTTAGCTGCTATTAAAAGTCGCCGCTAA AATGTATTTTGATTGTACCAAAACTTGTATGTCTATGTGGGTACATTTTGATAGTTCAAAACTTCATTTTCAAATTTCAA TTGATTTCAGAGGAGCTAGCACGAGTTCAAGGGAAGAGGACATGGAAACTTGTTTATGTTTTACTTTCATTCATGATGTT AAACCAAAGCCTTTAGAACCCTTCAACGATTATCAGCAGGTTCAGATAATCAAGAAAAATCATGGTTTCGAAGCAAAGTC TGTTGCCATAGATGGAATTCCACCTGGTTTATTGAGGAAAAAAAGGTGGAGGCTTCGTGCTAGCACTCCCCGCCATTACA GTTTGGGCGAAGCATTGGGTTCCAATGACATCTTACGTTCCAGGCTACCAGATTTCAACTTCCCATTGACCAATGATTGT TGTGAATCAGTGGTTGTGGGAAAGTGGTATTGTCCTTTTATGTTTGTGAAAGAAGGAATGAAATCAAAGGAACAGATGAA GATGTCAGTGTTCTATGAGTTGACACTTGAGCAGAGATGGGAAAGAATATTCTCAAAGGAAAATAGCGGGAAAAATGTTG TGCTTGTAGATGTTATTGTTCAAACAGAAGTTGCCAAGGTTGCAGGCAAGGATGCTGTCTGGGATGAAAATGGTGTTGTT GATGGGGTATTGTGGTTTAAGAGTTTTGATGATGTGGGGGCAGAGACAAGTGTTGGGTTGAGTATGGAAGTTGTTGAGGG AATGAAGTGGGAACAACAAAGAGTTGGATGGATTGCAGGGGATATGAGGCAAGTGAGAGTGGAAAGAGTAGAGAAGTTTG GAGGAACAAATGAGTGGAAGAAATTTGGGTGTTATGTGCTGGTTGAAAGTTTTGTGTTGAAGAGAATGGATACAAGATTG GTGCTAACTTGTGATTACAGGCACACAAATCAAATTAGGTGCAAATGGGAGTGATTTTTTTCTCAATTGTCTTACTTTGA TCTTTGCTTTTCTTTCTAATTAGGTAGTTTAACATATGGTGCTTGTTATATATACATCTTATTCATGTAGCTACAAATTG ATAGAATAAAGAATACTGTGAATGTGGATGTTGTTGGTTAAAAGTAGTTGTGATTGCTAGCTTGGAAGCTGTGAAGGACA ATATGGATTCTGCTGAAGGTCTTTTCTAGTTTAATAGTTTCAACAATGTTGGAGAGAAGAACAGTGTGGGACTGAGCACT GCAATAGTTAAGAGAATGAAGTGGGAGCTGGAAAGAGTTGGGTGGACTGGAGGGAAAGAAAAGCAGATCAGAGTTAAGAA AGTGGAAGAGTTTGAAGGGACTAATGGATGGAAGAAGTTTGGATGTTATGTTTTAGTTAACTTTTGTACTTACGATATTG GATGGGAGCATAGTACTTAACTATGCTTTCATACACTCTCTTCAACTTAGAAGCACTGAGAATGACAAGTTCTGGGCTTT TGCCCTCCAAATTATCAAAAAAAAAAAAAAAAAAAAGAGAATGACAAGTTCTACACCAAGACAAATTCATCCTGTTCTGT TTTCAAGTGGATATTACTACTAGGTCCTGTAAAGAGAGTGCCTAGTCTTGTAATCTACATTTTCAATTGTGTGTGATCTT GTTGTCTAAGAATCAAATTTGTTTATTCATTTAGTTTTTCAGTAATCATTCCAAGTAAGAATACTATATCTTTCTTAATA ACATATTTAATTTAATTTAGAGTTTCTTATACTTTGTAGCTACATCTCATTTTCTTTACTCATCAAAGTAAGTTTAAGTG ACACTCCAACTTTAAAATAAGGTTTGGATCAATAAACTTTATGATTAAAATAATATGTTTTTCATTCTCTTAACCCACAA TATAACTGTTGAGCATCCAACCCAAATTGAACTACAAATAAAAAACAAAGGCTTAAATATATTTTTGTCCTCACAAAATA TAACATCAATTCTTGTATGTGTATCTATCAACTATTTCTTAGAGCTCACATGCACCTCCGACTTTAGGATTTATAGAAGA TAAATACTAAATAGATACGGTGGTGATTCATAAATCACTCTACAATGTCTACCACTATAGATACCCCAGTTTTGTGGC
CDS sequence (LotjaGi2g1v0285600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATGTAACAAGACTGCTTTCCATGTACAAAAGGAACCCCCATGCTCTTGTTGACCCACCTCCATCGGGTCCGAGTTC AGGTTATCTTGTAATCATGGATGAAGAATCTGAGACTTACAATTGTTTCGGTTGCAAGAATTCCAACATCAGCGATCTTC CTTTCCCTCAGAACAAAGACTTAACAATCGAGTTCAGATCAAGAATAGGTGAAAAAGACCACTATGAGTATGAAAAATCC ATGTTTGTTCCGGTATTGAATCAGCCCTTGTCTTCAAACCGCTACTACGTCATAAGAAGGAGAGGGAAGGAACAAGGAGG AGCTAGCACGAGTTCAAGGGAAGAGGACATGGAAACTTGTTTATGTTTTACTTTCATTCATGATGTTAAACCAAAGCCTT TAGAACCCTTCAACGATTATCAGCAGGTTCAGATAATCAAGAAAAATCATGGTTTCGAAGCAAAGTCTGTTGCCATAGAT GGAATTCCACCTGGTTTATTGAGGAAAAAAAGGTGGAGGCTTCGTGCTAGCACTCCCCGCCATTACAGTTTGGGCGAAGC ATTGGGTTCCAATGACATCTTACGTTCCAGGCTACCAGATTTCAACTTCCCATTGACCAATGATTGTTGTGAATCAGTGG TTGTGGGAAAGTGGTATTGTCCTTTTATGTTTGTGAAAGAAGGAATGAAATCAAAGGAACAGATGAAGATGTCAGTGTTC TATGAGTTGACACTTGAGCAGAGATGGGAAAGAATATTCTCAAAGGAAAATAGCGGGAAAAATGTTGTGCTTGTAGATGT TATTGTTCAAACAGAAGTTGCCAAGGTTGCAGGCAAGGATGCTGTCTGGGATGAAAATGGTGTTGTTGATGGGGTATTGT GGTTTAAGAGTTTTGATGATGTGGGGGCAGAGACAAGTGTTGGGTTGAGTATGGAAGTTGTTGAGGGAATGAAGTGGGAA CAACAAAGAGTTGGATGGATTGCAGGGGATATGAGGCAAGTGAGAGTGGAAAGAGTAGAGAAGTTTGGAGGAACAAATGA GTGGAAGAAATTTGGGTGTTATGTGCTGGTTGAAAGTTTTGTGTTGAAGAGAATGGATACAAGATTGGTGCTAACTTGTG ATTACAGGCACACAAATCAAATTAGGTGCAAATGGGAGTGA
Protein sequence (LotjaGi2g1v0285600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYVTRLLSMYKRNPHALVDPPPSGPSSGYLVIMDEESETYNCFGCKNSNISDLPFPQNKDLTIEFRSRIGEKDHYEYEKS MFVPVLNQPLSSNRYYVIRRRGKEQGGASTSSREEDMETCLCFTFIHDVKPKPLEPFNDYQQVQIIKKNHGFEAKSVAID GIPPGLLRKKRWRLRASTPRHYSLGEALGSNDILRSRLPDFNFPLTNDCCESVVVGKWYCPFMFVKEGMKSKEQMKMSVF YELTLEQRWERIFSKENSGKNVVLVDVIVQTEVAKVAGKDAVWDENGVVDGVLWFKSFDDVGAETSVGLSMEVVEGMKWE QQRVGWIAGDMRQVRVERVEKFGGTNEWKKFGCYVLVESFVLKRMDTRLVLTCDYRHTNQIRCKWE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 386 | 386 | 3.3E-202 | – | |
| PANTHER | 1 | 386 | 386 | 3.3E-202 | – | |
| Pfam | 24 | 123 | 100 | 6.1E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0285600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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