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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR010683
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.601s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0128279.1
n.a. Uncharacterized protein TCM_011355 [Theobroma cacao] gi|508709587|gb|EOY01484.1| chr0 57939360 57941887 +
2 domain predictions
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Lj2g3v1194180.1
n.a. Uncharacterized protein TCM_011355 [Theobroma cacao] gi|508709587|gb|EOY01484.1| chr2 18899483 18901500 -
2 domain predictions
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Lj2g3v1194190.1
n.a. Uncharacterized protein TCM_011355 [Theobroma cacao] gi|508709587|gb|EOY01484.1| chr2 18902124 18903841 -
2 domain predictions
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Lj2g3v1196330.1
n.a. n.a. chr2 18969812 18979589 +
2 domain predictions
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Lj2g3v1196340.1
n.a. Uncharacterized protein TCM_011355 [Theobroma cacao] gi|508709587|gb|EOY01484.1| chr2 18970237 18972821 -
2 domain predictions
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Lj2g3v1196350.1
n.a. Uncharacterized protein TCM_011355 [Theobroma cacao] gi|508709587|gb|EOY01484.1| chr2 18974268 18979589 -
2 domain predictions
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Lj2g3v1196350.2
n.a. Uncharacterized protein TCM_011355 [Theobroma cacao] gi|508709587|gb|EOY01484.1| chr2 18977386 18979589 -
2 domain predictions
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Lj2g3v1196390.1
n.a. Uncharacterized protein TCM_011355 [Theobroma cacao] gi|508709587|gb|EOY01484.1| chr2 18980613 18981720 -
2 domain predictions
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LotjaGi2g1v0059300.1
n.a. DUF1262 family protein; TAIR: AT1G61600.1 DUF1262 family protein (DUF1262); Swiss-Prot: sp|Q9NUV7|SPTC3_HUMAN Serine palmitoyltransferase 3; TrEMBL-Plants: tr|A0A0L9VN56|A0A0L9VN56_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0059300 LjG1.1_chr2 12351031 12354072 +
2 domain predictions
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LotjaGi2g1v0285600.1
n.a. DUF1262 family protein; TAIR: AT1G13520.1 hypothetical protein (DUF1262); Swiss-Prot: sp|P10565|BINB1_LYSSH Larvicidal toxin 51 kDa protein; TrEMBL-Plants: tr|A0A072UEA2|A0A072UEA2_MEDTR DUF1262 family protein; Found in the gene: LotjaGi2g1v0285600 LjG1.1_chr2 75871092 75874529 -
2 domain predictions
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LotjaGi2g1v0285700.1
n.a. DUF1262 family protein; TAIR: AT1G13480.1 hypothetical protein (DUF1262); Swiss-Prot: sp|A0T0X5|RK2_THAPS 50S ribosomal protein L2, chloroplastic; TrEMBL-Plants: tr|I3SVS3|I3SVS3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0285700 LjG1.1_chr2 75881598 75883762 -
2 domain predictions
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