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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0286200 |
| Transcript ID | LotjaGi2g1v0286200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; TAIR: AT3G05390.1 S-adenosyl-L-methionine-dependent methyltransferase; Swiss-Prot: sp|Q94II3|PMTL_ARATH Probable methyltransferase PMT21; TrEMBL-Plants: tr|A0A1J7HP45|A0A1J7HP45_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0286200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:75914594..75916173) extracted from Lotus japonicus Gifu genome v1.2.
CCAACTGGTACAGTTCATATATTACACTTCCCAATTGCACTTATTCAACACAAATTGTCCTTCCTTATAGCTAAAGCATT TGTTTGTGTTTCCTCTATGGTATGATTTGATTTGATGCCTTCAAAAAATGATTTGATGTAGCTCTATTATTTTCCATTTC CCTCATTTTGTTATAGAAGAGAGTCCAATCATATTCAATGGGGAGGTCATGTCTTCCCAAATGCAAACTGGCCAGAATAT TGGGTTGGCTGCAGATTATTCTGGGAGGAATGGTTATCTTAGTAAGCATTTTGAGCCTAATAAAATTCTACTCTGTTGGG ATTTTCTTCCACAGTGAAGATATGTGCCAGCAGAAATTCTACACTGTGAAGGATGTTGTTCATGAAGGTTTCGATGCCAA AGCGCTCAGTGATCGAGTTGTAGAAGTGTTAAACAAGTTGGAAACTTTGCAGGGCAAGCTTGAGTCTAAAGTACAAGAAA TGGTGAAAAACAAGGGAACTTTGGAGAAGCAGTTCTTAGAGGATGAAATAGTTAGGCCTCTTCACAGTGCTAATGTTGCT TTAAGACAGATTCGGCTTCCGAAGATTGCAGAAGGGAACTCCACCGTGATGGAAGATCCTTTGATTAACTTTTTTGTGAC AGAGGAGATTAGAAAGTATATAACCCCAAAGGAGAATAGAGTTAGCAAGATTAACCTCTATGGGACAGATAAAGTTTACA ACACAATTGGGCATGCTTGTGTTTTGTACAAGAAAGAGTTAGAAGAGTACATGGACTATGACATTGGCTCCTACTGTGAT GATGATTGGAACTTAGCTCAGAAGCTCATGCTCAATGGGTGTGATCCTTTGCCTATAAGAAGATGTTTAACAAGAGCTTC AAAGGTTTACTATAAACCTTACCCTATAAATGAGTCACTTTGGAAGCTACCAGATCACAGAAATGTGAGGTGGGGGAACT ACCACTGCAGAAACTTTGAGTGCTTATCAAGCAAGAATCCGAAGAGGGGCTATTCAAAATGCACTGGATGTTTTGAAATG GAAAAGGAAAAGCTGAAATGGGTTTCTAATAGTTCACTTCCTGCAGATTTTTTGATAGGTGATGTTTTGAAAATTAAGCC TGGTGAGATGAGAATTGGGGTAGACTATGGAATAGGAACTGGAACATTTGCTGCAAGAATGAGGGAACATAATGTGACAA TTGTCTCAACTGCTATGAACATTGGGGCTCCTTTCAATGAAATGATAGCTCTTAGGGGTTTGATTCCTTTGTATGTCACA CTTAATCAAAGGCTTCCATTCTTTGATAACACTATGGATTTGATTCACACCACTGGTTTTATGGATGGTTGGATAGATCT GATGTTGTTGGATTTCATACTGTATGATTGGGATAGAATTCTAAGACCAGGAGGTTTATTATGGATTGACAGATTCTTCT GTAAGAGAAAGGATTTGGATGATTATATGTACATGTTTCTTCAACTTAGATACAGGAAGCACAAATGGGTTATTTCTTCA AAGTCAAAGGATGAGGTATATCTCTCTGCATTGCTGGAAAAACCTCCCAGAGCCATATGA
CDS sequence (LotjaGi2g1v0286200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAGGTCATGTCTTCCCAAATGCAAACTGGCCAGAATATTGGGTTGGCTGCAGATTATTCTGGGAGGAATGGTTAT CTTAGTAAGCATTTTGAGCCTAATAAAATTCTACTCTGTTGGGATTTTCTTCCACAGTGAAGATATGTGCCAGCAGAAAT TCTACACTGTGAAGGATGTTGTTCATGAAGGTTTCGATGCCAAAGCGCTCAGTGATCGAGTTGTAGAAGTGTTAAACAAG TTGGAAACTTTGCAGGGCAAGCTTGAGTCTAAAGTACAAGAAATGGTGAAAAACAAGGGAACTTTGGAGAAGCAGTTCTT AGAGGATGAAATAGTTAGGCCTCTTCACAGTGCTAATGTTGCTTTAAGACAGATTCGGCTTCCGAAGATTGCAGAAGGGA ACTCCACCGTGATGGAAGATCCTTTGATTAACTTTTTTGTGACAGAGGAGATTAGAAAGTATATAACCCCAAAGGAGAAT AGAGTTAGCAAGATTAACCTCTATGGGACAGATAAAGTTTACAACACAATTGGGCATGCTTGTGTTTTGTACAAGAAAGA GTTAGAAGAGTACATGGACTATGACATTGGCTCCTACTGTGATGATGATTGGAACTTAGCTCAGAAGCTCATGCTCAATG GGTGTGATCCTTTGCCTATAAGAAGATGTTTAACAAGAGCTTCAAAGGTTTACTATAAACCTTACCCTATAAATGAGTCA CTTTGGAAGCTACCAGATCACAGAAATGTGAGGTGGGGGAACTACCACTGCAGAAACTTTGAGTGCTTATCAAGCAAGAA TCCGAAGAGGGGCTATTCAAAATGCACTGGATGTTTTGAAATGGAAAAGGAAAAGCTGAAATGGGTTTCTAATAGTTCAC TTCCTGCAGATTTTTTGATAGGTGATGTTTTGAAAATTAAGCCTGGTGAGATGAGAATTGGGGTAGACTATGGAATAGGA ACTGGAACATTTGCTGCAAGAATGAGGGAACATAATGTGACAATTGTCTCAACTGCTATGAACATTGGGGCTCCTTTCAA TGAAATGATAGCTCTTAGGGGTTTGATTCCTTTGTATGTCACACTTAATCAAAGGCTTCCATTCTTTGATAACACTATGG ATTTGATTCACACCACTGGTTTTATGGATGGTTGGATAGATCTGATGTTGTTGGATTTCATACTGTATGATTGGGATAGA ATTCTAAGACCAGGAGGTTTATTATGGATTGACAGATTCTTCTGTAAGAGAAAGGATTTGGATGATTATATGTACATGTT TCTTCAACTTAGATACAGGAAGCACAAATGGGTTATTTCTTCAAAGTCAAAGGATGAGGTATATCTCTCTGCATTGCTGG AAAAACCTCCCAGAGCCATATGA
Protein sequence (LotjaGi2g1v0286200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRSCLPKCKLARILGWLQIILGGMVILVSILSLIKFYSVGIFFHSEDMCQQKFYTVKDVVHEGFDAKALSDRVVEVLNK LETLQGKLESKVQEMVKNKGTLEKQFLEDEIVRPLHSANVALRQIRLPKIAEGNSTVMEDPLINFFVTEEIRKYITPKEN RVSKINLYGTDKVYNTIGHACVLYKKELEEYMDYDIGSYCDDDWNLAQKLMLNGCDPLPIRRCLTRASKVYYKPYPINES LWKLPDHRNVRWGNYHCRNFECLSSKNPKRGYSKCTGCFEMEKEKLKWVSNSSLPADFLIGDVLKIKPGEMRIGVDYGIG TGTFAARMREHNVTIVSTAMNIGAPFNEMIALRGLIPLYVTLNQRLPFFDNTMDLIHTTGFMDGWIDLMLLDFILYDWDR ILRPGGLLWIDRFFCKRKDLDDYMYMFLQLRYRKHKWVISSKSKDEVYLSALLEKPPRAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 5 | 460 | 456 | 7.6E-248 | – | |
| PANTHER | 5 | 460 | 456 | 7.6E-248 | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 20 | 44 | 25 | - | – | |
| Phobius | 45 | 460 | 416 | - | – | |
| Coils | 67 | 98 | 32 | - | – | |
| Gene3D | 282 | 454 | 173 | 4.2E-7 | – | |
| Pfam | 304 | 410 | 107 | 3.2E-6 | ||
| SUPERFAMILY | 313 | 427 | 115 | 3.67E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi2g1v0286200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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