Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0287900 |
Transcript ID | LotjaGi2g1v0287900.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | GH3.3; TAIR: AT2G14960.1 Auxin-responsive GH3 family protein; Swiss-Prot: sp|O82333|GH31_ARATH Probable indole-3-acetic acid-amido synthetase GH3.1; TrEMBL-Plants: tr|A0A151S0P1|A0A151S0P1_CAJCA Putative indole-3-acetic acid-amido synthetase GH3.1; Found in the gene: LotjaGi2g1v0287900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76096150..76102245) extracted from Lotus japonicus Gifu genome v1.2.
TTTGACATATAATGTTATGTGATTAGAAGAGAAATGATCAATAACTTCTAACACAATTGAACTCTTTATACATAAAATAA ATGTTTGATTCTTAAACCGTAGTTTTAAAGAATGACTTGTTGAAAGATACTTACCTATTCAGTTATATAATTGCCAACGG TAAGAATACTTTAAAAAAAGCAAACAAAAATATCTCACTATGTATACACTGTTTGGTTGTTTGGTGGTATATTTATAGTT ATCTTTACTTGAAAATTGCCAAAAATTAAGAATTAGTAGTGGAGGACTAATCTACATTGGCACCACATGGGTCCCACTGG GATGACATGGCATGGCTTAGACTTGACACACCCGGGTCCAACAATTCTTCTATATAAACTCTGTAACGTGCACTCGTCCT TCTCACTACTACAACACACCATTCTCTCTCAGAGTTTTCAAGAGTCTCTTCCTCCTCCAACTCAATTACTCTCAATTTTC TTCCCCTCTTCTCTATTTCTCCTTCACTTCTTCAACTTTATTAGCTTCCACAATTAACCTCTCATCAGTTTCTCAATTCT CTCTGTTTTCAAATAGTAACTATAACTGAATTGTGATCATGGCTGTGGATTCAACTCTTTCATCTCCCTTAGGCCCCCCT GCGTGCGAGAAAGATGCAAAAGCACTGCAGTTCATCGAGGAAATGACACGAAACGCCGACGCAGTCCAGGAGAGGGTACT GGCGGAGATTCTGAGCCGAAACGCCAACACAGAGTACCTCAAACGCTTCCACCTCGACGGCGCCACCGACCGTGAAACCT TCAAGTCCATGGTTCCTGTCATCACCTATGAAGATGTCCAGCCTGAGATTCAGCGCATCGCCAATGGCGACCGCTCCCCT ATCCTCTCTGCTCAGCCCATCTCTGAATTCCTCACAAGGTCAGTAACGTAACATTGATTTTAACCTCACATACAGTACTC TTTTTGGTTTTGATATATATGGGAATTTGGAGCTGAAACTAATTTTGGTTTTGTGTTGTGGAATCTGAATCTGCAGTTCT GGAACTTCAGCTGGTGAAAGAAAACTGATGCCAACAATTAAGGAAGAGCTGGATCGTCGCCAGCTTCTATACAGCCTCCT CATGCCAGTTATGAACCTGTAAGTTCCTTCCTACATCTGTGCCTAATTAATGTCTCTTGTCTTTTTCTCAATATATATAT GACCATTTATAAATTCCTTATCTATAAACAATTAAATACTTCAATAAAAATATGTTTATTTCTTATTCTAATCATAATCA TGTTTATTATTTTGAATGGAACAGTTATGTACCGGGTTTGGACAAAGGAAAGGGTCTCTACTTTTTGTTTGTGAAGTCCG AATCAAGGACCCCGGGTGGGTTATTGGCCCGACCCGTTCTCACAAGCTACTACAAGAGCCAACATTTCAAGACCCGACCC TATGACCCGTACAATGTTTACACTAGCCCAAATGAAGCTATCTTGTGCCCTGACTCATTTCAGAGCATGTACACTCAGAT GCTTTGCGGCCTCATAGAGCGCAATCAGGTCCTTCGCCTCGGTGCGGTCTTTGCCTCTGGTCTCCTTCGTGCAATCCGGT TCCTCCAGCTCAATTGGCCCGAACTTGCCCACGACATCCGCACCGGGAACCTGAATTCCCGGATCACTGACCCGACGTTA AAGGGTTGCATGAAAGAGATCCTAAAACCCGACCCGGAATTGGCCTCGTTTGTAGCGCGTGAATGTTCCAAGGAAGATTG GGAAGGAATGATCACGAGGATTTGGCCTAACACCAAATACCTTGATGTGATTGTAACGGGCGCAATGGCACAATACATTC CCACTCTCAACTACTATAGTGGAGGTTTACCAATGGCATGCACCATGTACGCTTCCTCAGAGTGCTACTTCGGGCTCAAC CTGAACCCGATGTGCAAGCCTTCTGAGGTTTCGTACACAATAATGCCAAACATGGCCTACTTCGAGTTTCTCCCGCACGA GTCCGGGTCAGCCAACTCGCCTTGGCTGACCCATGACTCGCCGGATGAACTCGTGGAGCTTGCTGACGTGGAGGTAGGGA GGGAGTACGAGTTGGTGATCACCACCTATGCGGGGTTGTACCGCTATCACGTTGGTGACATCCTCCGGGTCACAGGGTTC CACAACTCAGCGCCGCAGTTCCACTTTGTGCGCCGGAAGAATGTGCTTCTAAGCATTGACTCAGACAAGACAGATGAGTC GGAGCTGCAGTGCGCGGTGGAGAACGCCTCAAAGCTGCTCTCTGGGTTCAACACGAGCGTGGTGGAGTACACGAGCTACG CGGACACAAGGACTATTCCGGGACACTACGTGATTTACTGGGAGCTGTTGACCAAAGACTCAGCGAACTCACCGAGTCAT GAGGTGTTGGATCGGTGTTGTTTGGAGATGGAGGAATCATTGAACTCAGTTTATAGGCAGTGCCGGGTCTCAGATCATTC GATTGGGCCGCTGGAAATACGTGTTGTGAGGAGTGGGACGTTTGAGGAGCTTATGGATTATGCAATCTCAAGAGGTGCGT CCATAAATCAATATAAGGTGCCAAGGTGTGTGAATTTTACTCCCATAATGGAGCTATTGGACTCAAGGGTTGTGTCTGTT CACTTTAGCAAAGATTTGCCACATTGGACTCCTGAAAGGAAAAGATGATGTTCCTGCCATGTGGGTTAACTGGGTAGATA TATATAGATTATGTTCTTTTTTCTCTTTTTGGGTTGATTAATGTGTAGGGCTTGTGGAGAGTCTGATGGGGAATATGTTG GATTAGGATGTCTCTCATGGTTAGGTTAATCATGTATTTTGGTTCAATTAACTTGTGCAAAAGATGCTACTCTTTTTCAG TAACTGTGTCTAGTGTATGTATTGGTTGTTTCATGTAGAAGAAGTGAAGGAATAACAGAACAAAAGCCATCTTCCCTTGA CAATTGAAGTTGTTCCATTGTAGTAACTATCAAATAGAGAGAGCATTTAGTCATGTAATATTTTCTTACAAAATTTTCTA CAAAACTTTTTTTTTCTCTATGAGATCAATCATCTCATCCCCCACTCCCCCCATATTTCTCTCTAATCTCGTCCTATTTT TCACCTCATTGTACAAAATATAAAAATGTGATTATATTGTATAAGTATAATATGTTTATAAAAAATGAAAGAAACTCTTC TTATGAGATGGAATGAAAATTTGTTCAAATTGCACTCAATTGATATTCAAACATCCTAGATGTAATGTGATGACCATATT TTGCAACTGGGGTTATAAAGCCTGGGGTATCACAAGTTCTTATTAAGGACTATACCTTTAGACCATAAAGCTACATGTAC ACCAAATTATGCAATGTAGTCAGTTTACTGAGAAATTTAGGCTATTTAGGAGGGACATAATTTACTTGCTCTGTAATGTT AAGCTCTTTTAACACCAACCACAAGCTTTATAGCATGTAATGGACACCATTGGATTTTCACATTGAAACAAAATTAATAC TTAAAATTACATTTTAATACTATAGCTGATGCAGTAGACATTCAATTGTACAAAGCAAGAAATCAGTTCTCTGTTTTACT ACAATGACATGTTTGAAATTTTCAGTTGTTTGCTTTACTTGTGTGATGGGAAGCCAATAGCTTCAATCCATAACTTGAGA AAGGGCTGGTCTGGTTGTTATTAGTTTCATGTATACAACTTGTATAAACAAGGTTTAACAAAAAATTCCTGCTATTTAAG AATTAATTATTTGACATTATCTTCATATTCAGAGACAGTGAGGACTTAGTAATTACAAAAAGTGCTAATGGAGTAAACAT GAAACATCCAATCGAAGCATAACAGATAATCAAAGTAAATAAAAGGAAAAGTTCAAGCCCCAACAAAACAGGGAAATGTG CAAAAGAAGAAGTGGAACAGATTAGTACATCTCAGTCAAATCATTTGAGAAAAATAAAGCAGATGCTTGAGATACTAATC ATATATCATATATTTTACAAACACTGGACACAATCTTGATAAGTTCATAGTGGCACTCGTTTACATATTCAAGGGTAGCA TATGTTTAAAAATGGGTGAAATGAAAATTTTAAGGAACTTACATTACAATTTACATGTAGTCCATCCCTCAAATTTCACT CCAATTTTATTTGTTCTATTCAAACTTCTATTAAGCACGCTCTAAATGTGGCCATTCCTTTGCAGCTTCAACTAATTAAC AAAAGGATGTAATTTTAACTTATCGTTAATCTAGTTTTTTTGCTAAACCATTCAATCACGTTTAAGCACATATCACATAG CAAAACGTGATTAGAAGGTAATGTAAAACTTTTATATTAACAATGAATCTAAAATAACCTCTTCATAAAATTCTCAGATC AACAAATGTCCCAGTGAAATACTGAAATTTCTCTTCCAGAACTGTATTCGCCAATAGATAGTTCAGATGCTCCGCAAGTT TCTACGTTCTTAGATGCAGTAGATCATTGAGAAGATCTACCTAATAAGTAGTAGTTGCTCGATTAGGACTAAACGATCAC CTGCAAGAACAATAGCCTATTACAATGATTTTAACAACTAACTAGTGTGTAAAATTGAAGGATAAGAAGAAATCTAAGGA CCTAATCAAATGAAACATGCATGGTGAACTGATATATTAAAATGCTTAAAGTCTTAAACATGTCAAGAACAAATTAGATG GTGACAACCTGATTCTAAACCAGAGCAACCAGCAGAGACTTAGATTGGATCACTTACTATGTGGTTGAAGACAAGCTGAG GTTGCTGTTGAATGTTTCCAGGCTTCCACCAGCTATAAGATCCATTTCGAGTTTTCGACTAGGTATAAATAGTTGTATTT TCTGAGAAAGAGCCAAATGTAGGCTATTGTAGTTTCTTCTGCTGTGTGAACCATATTAAGGTGGAAAGATGACAGACTAT AAACCATTGAAATAGGCTCAGTTTTGTTCATGTGCGGTCAGCACAAACACACACTGGATAAGAGTTATCAGGTAAGAGCC ATAGACATAGGTTTCTGATTAGCCGGATTCAAGGTTTAATCAGAGAGACTGCAAGGTATCTTATTATGCTGTGACAAAAG ATGGATAAGGAAGTAGATGTAGCATATGCCATCACATTGATGGCTAAAATAGTAGAAAACAAAGTCCCTTGAACCTTGTA GAATGATACTCGCATGTTAAATTTTAAATCGCAATTGCGGTTGCGTTGTGATCATCAAAGATATGAGTATATTGTGGAAG ATACTTTTTGTGACCACAATTGTGGAACCATTGCATTGCAATAGCACTTGTGATGCATAATAGATCATTAACTTAGTTCG GAGATTTTGTGAGTGGGGATCACTACAGAGAGGCTTCACATAAGGAGGGAGGCTAAGATGGCTAAAGCCAGCCCTCCTAT GATGATCCACATGATTAAAGTCCCTGAGAAGAAAACTTGTGACATTAAAAAGAAACTGAGTGCAAAAGAGAGATACCCAA TTTTCTCAACTATTGCTGCAAGCCTTGGGTAGGAATATTTGATGAACAATGCAGAGAATGATGCTGCAAAAGCAATCACC ATAGAAGCTCCTAGAATGGAAGGTTGATAATGGGATGTAGACATTGCCTGATACCCTAAAGCAGCCTGAAAAGTGAGACT AACAATTTTTGTTGGTATAGTGAAGGGACTCCTGGGGAGGTAGTCCTGTTTTTCGATTTCAATAGCATTTAAATATAGTG GCAAGTGCTCAGAATCATGGTTTTGAGGCAAAACAAATGCCAAGGACCTAATTCTGGTAACACTGCTAGGTGAAGAAGAT ATTGGGATTTGACATTGAGGTATTGGAGGGGTTAAGTTTTTCCAAGCATTACGAATTTTTCTGAGTAAAAAAGGAGTGTT AGAAGACATGAAAAAAAATCCAAAGATAACAAGTAAATCAAATTCTTTCAGTGCTCTCTGTTATAAACACTGGTTTGGTT TTCTATTTTATAATGAGGTGAGGAATATTCAAGAAAAGCCAGGTCCAATGAGCTAGCTCTCTTTCCACGCCTCATAGTTT TCCAAGCAATTGCTGA
CDS sequence (LotjaGi2g1v0287900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTGGATTCAACTCTTTCATCTCCCTTAGGCCCCCCTGCGTGCGAGAAAGATGCAAAAGCACTGCAGTTCATCGA GGAAATGACACGAAACGCCGACGCAGTCCAGGAGAGGGTACTGGCGGAGATTCTGAGCCGAAACGCCAACACAGAGTACC TCAAACGCTTCCACCTCGACGGCGCCACCGACCGTGAAACCTTCAAGTCCATGGTTCCTGTCATCACCTATGAAGATGTC CAGCCTGAGATTCAGCGCATCGCCAATGGCGACCGCTCCCCTATCCTCTCTGCTCAGCCCATCTCTGAATTCCTCACAAG TTCTGGAACTTCAGCTGGTGAAAGAAAACTGATGCCAACAATTAAGGAAGAGCTGGATCGTCGCCAGCTTCTATACAGCC TCCTCATGCCAGTTATGAACCTTTATGTACCGGGTTTGGACAAAGGAAAGGGTCTCTACTTTTTGTTTGTGAAGTCCGAA TCAAGGACCCCGGGTGGGTTATTGGCCCGACCCGTTCTCACAAGCTACTACAAGAGCCAACATTTCAAGACCCGACCCTA TGACCCGTACAATGTTTACACTAGCCCAAATGAAGCTATCTTGTGCCCTGACTCATTTCAGAGCATGTACACTCAGATGC TTTGCGGCCTCATAGAGCGCAATCAGGTCCTTCGCCTCGGTGCGGTCTTTGCCTCTGGTCTCCTTCGTGCAATCCGGTTC CTCCAGCTCAATTGGCCCGAACTTGCCCACGACATCCGCACCGGGAACCTGAATTCCCGGATCACTGACCCGACGTTAAA GGGTTGCATGAAAGAGATCCTAAAACCCGACCCGGAATTGGCCTCGTTTGTAGCGCGTGAATGTTCCAAGGAAGATTGGG AAGGAATGATCACGAGGATTTGGCCTAACACCAAATACCTTGATGTGATTGTAACGGGCGCAATGGCACAATACATTCCC ACTCTCAACTACTATAGTGGAGGTTTACCAATGGCATGCACCATGTACGCTTCCTCAGAGTGCTACTTCGGGCTCAACCT GAACCCGATGTGCAAGCCTTCTGAGGTTTCGTACACAATAATGCCAAACATGGCCTACTTCGAGTTTCTCCCGCACGAGT CCGGGTCAGCCAACTCGCCTTGGCTGACCCATGACTCGCCGGATGAACTCGTGGAGCTTGCTGACGTGGAGGTAGGGAGG GAGTACGAGTTGGTGATCACCACCTATGCGGGGTTGTACCGCTATCACGTTGGTGACATCCTCCGGGTCACAGGGTTCCA CAACTCAGCGCCGCAGTTCCACTTTGTGCGCCGGAAGAATGTGCTTCTAAGCATTGACTCAGACAAGACAGATGAGTCGG AGCTGCAGTGCGCGGTGGAGAACGCCTCAAAGCTGCTCTCTGGGTTCAACACGAGCGTGGTGGAGTACACGAGCTACGCG GACACAAGGACTATTCCGGGACACTACGTGATTTACTGGGAGCTGTTGACCAAAGACTCAGCGAACTCACCGAGTCATGA GGTGTTGGATCGGTGTTGTTTGGAGATGGAGGAATCATTGAACTCAGTTTATAGGCAGTGCCGGGTCTCAGATCATTCGA TTGGGCCGCTGGAAATACGTGTTGTGAGGAGTGGGACGTTTGAGGAGCTTATGGATTATGCAATCTCAAGAGGTGCGTCC ATAAATCAATATAAGGTGCCAAGGTGTGTGAATTTTACTCCCATAATGGAGCTATTGGACTCAAGGGTTGTGTCTGTTCA CTTTAGCAAAGATTTGCCACATTGGACTCCTGAAAGGAAAAGATGA
Protein sequence (LotjaGi2g1v0287900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVDSTLSSPLGPPACEKDAKALQFIEEMTRNADAVQERVLAEILSRNANTEYLKRFHLDGATDRETFKSMVPVITYEDV QPEIQRIANGDRSPILSAQPISEFLTSSGTSAGERKLMPTIKEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSE SRTPGGLLARPVLTSYYKSQHFKTRPYDPYNVYTSPNEAILCPDSFQSMYTQMLCGLIERNQVLRLGAVFASGLLRAIRF LQLNWPELAHDIRTGNLNSRITDPTLKGCMKEILKPDPELASFVARECSKEDWEGMITRIWPNTKYLDVIVTGAMAQYIP TLNYYSGGLPMACTMYASSECYFGLNLNPMCKPSEVSYTIMPNMAYFEFLPHESGSANSPWLTHDSPDELVELADVEVGR EYELVITTYAGLYRYHVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDESELQCAVENASKLLSGFNTSVVEYTSYA DTRTIPGHYVIYWELLTKDSANSPSHEVLDRCCLEMEESLNSVYRQCRVSDHSIGPLEIRVVRSGTFEELMDYAISRGAS INQYKVPRCVNFTPIMELLDSRVVSVHFSKDLPHWTPERKR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 7 | 598 | 592 | 0.0 | – | |
PANTHER | 7 | 598 | 592 | 0.0 | ||
Pfam | 26 | 572 | 547 | 2.8E-207 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0287900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…