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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0288000 |
| Transcript ID | LotjaGi2g1v0288000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WPP domain-interacting tail-anchored protein 2; TAIR: AT1G68910.1 WPP domain-interacting protein 2; Swiss-Prot: sp|A8MQR0|WIT2_ARATH WPP domain-interacting tail-anchored protein 2; TrEMBL-Plants: tr|A0A151R7D9|A0A151R7D9_CAJCA WPP domain-interacting tail-anchored protein 2; Found in the gene: LotjaGi2g1v0288000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76114423..76120820) extracted from Lotus japonicus Gifu genome v1.2.
CTGAATCCAGCGAGAGGGACCCACATGAAAGAAGACACTTGAACTTTACACGAGTCTAAGCCATACAGATAGATCTGTGT CTTATCTACCTGTTTGTGCGTACCCAGTTGATTTGTGTTTTGTGTAGTGCTCGAATCAAACCCAATTATTCAAAGTCAAT GTCATCACTTCAAGATCAACGTGCACCCCAATTCAAGTCTTGAAGTTTGAATTCTCTTTTAGATTTTTCATTCATAGATC ATGCACTAGTCTGACCATTTTGCTGTTTGCACTTCTAGTTCTTCTTCCACGGTTCCACCTCATTGATCCACCTAGATTGG AGACACACTATCACAAAAAACACCCTTTCTGTTAATTTTTTCTTTGAACTTGGAGAATGGGAAAAAGGTGACCGACCCAT TTATTTATAACGGTGACCCATTTATTTATAACGGTGACTTGGAAATAATTGGTAGTTTAAAGGCTTGGCTAGAGGACCAG GGAAGACTAACCAGGACAATTTCCAAGTGGGGTTTCTGATATGTCAAGTTTTTCAAGATCATTTTCCTGCTGAGGAAAGA AGACCCAGAAGCGTTTTGCAAAAGGTAAGGCTTCCCAATTGATAATTTGATGTAACTTTGAATTTTTTTTACACGGGCAT CCTAGGTGGAAATGAGAAGGTCAAGCTTGTTGTTTATGATAGTAGTAGCATGTCCTAGTTTTGGAATGGTAAAGTTTGTG GCTTTGCTGTGGATTGTAACTTGGGTGGTAGTTTGTCTTGTAAATTTAAAATTCTGATCAGATGTTAGCTGGATGTTTCA GTAAATTCGTGGTCACTTTTGTGTGATGTTATAATTAATGGTTTTTGGTGGCAATCGATGGTGTGTTGTGTGTGTTGAAT TTGTTAGAAAACTCGCATGATCTGGTGTATAACATCAGTTAGATTGGACTAGATGCTTCATTAGTGGAATTAGCATTATG TTAGAAAGTCAAAATTGTACATTTGAAATGAAGCAAGAGAATTAGCTTTTTTTAGTTATGCATGTTTAAAGACTGAAAGT ATTGGGTTTTCCTTGTTAGGTTTTCCCAAGGGGGTTTTATCCTAGCAAGGTTTTAATGACGCTTGTTTTGTTAAGTCTAT TTTCTTGGAAGTATTGGGTGGGGTAGTTCTGTCACTCTATGATCTTTGTTATGTTCATGTTAGTTCTTAGTCTATATCTT TTCTCTTCTGTATTGGGTTGAAGTACCCCTTGTACTTCTATTCAATATAATTCTTATTGCCTATCAAAAAAAAAAAAAAC TGAAGAAGATAGATAATGAATGTTAGTGGATTAGAAATAAGGATTCTAAAAGAAGATATAAGGCATCCTAGTTCCTGAGA TTTTTCAATTTTCTTCTTCTTAATATATCTCTCTCTAGTTGTTCAATATCTGGAAAAGGTTGTGGAAATTGATATAGAGT GGAAATGCTTCTTGTGTGATATTTGGAAATTCATATGAAAGGAACAGTGGACAACAGCTACTTGTAAAGAAATAAACTAA GATTAATTGATCTTTAAAAAAAATAACTACCATTATGCTATCAAAAGAAAATCTTCCAATAGCTTGCATTTTGTACTTTC TTTTACTTACATCTCTTCAAAGCCTTACTCATTTTGTATACAGTAACAGTTGCAATTTTTCATCTTTCCTTTGTGGAATA GGCAAAACATTACATATGCTTTCTTATAACCAACTAATTGTCTGCTATTTATCTAAGTTAAATTTATCCTGTATTAATAT ATAAGTAAGGCTGTTTCTTTTCTTCCACTAAAATCTCATTTCTACCTTATTTTCTGGACTTGACTTCTAATTGCCGAACC AAGAGGCCCTAGAGATACAGACTAGCAATGGATGAATTTGCTAACAAAGTTCAAGGCGGCTTTAATGCTGGAGATACAGC TTTTGGGAAACTTCACTCACTCAAAGGGTTCTCAACTAAAGAAAATGATATGCAAGAAATGGAGATGTCCCTGCAAGCTT TAACAGAAATAGACCACCGCTTAGCCTATTCTTCTGAGAAGCTGGTGAACTTGCATGCACTTTATATTTATCTGTTGGCC CGTGAAAATGATCTTGAACCAATGGATTCAAAGAATGACCTCATCTTGGCAAATATGTTTGAGAAGGCAATGACATCAGA TCTATTGTCTGGCATTTTAGATTCTGAGGTAAGAGAGCTGGACAATTTCATCGACACTCTACAGGAAGAAATTGTTGATG CTCGTCATAAAATATTTTCATGCAGACATCTGACTGAGGTTTACTTTATAATGGATGAAAAATTGCACGACTCGGAAGAG TCCGTGAAGCAGTTTCAACAGCAGTTATTGGAGTTGAAGATGCAATCATCCCAGTTGCAGAAAACCCTTGTGGCTTTCCA ACATGAGAGTTGTAAGTTTAAATTTTCATTTAGATATTTATTTTTTCAAATATTTATACTGAGGATGCAGTTATTTTCCA GGGGAAACGGGGAAGACCTTGAGTTTATCAGAAAATGGTCAGCTGATAGATGCTAAAGCAAAATCCAAGGATCAGATGGT TGAACAACGAAGATATATTCTGCGAATGCTTGAGAAGTCCTTAGCACGGGAGCTAGATCTTGAAAAGAAGCTAGCAGAGT CAAGAAAAAATGAAGAGCTAAAGTTGAAACTCCGCTACACGGAACAAGTAGCATTTTATATGGAAGAAGCAGCGGAAGTA GTTTGGGGGAGATTTCTAGAGGCAGACAATGCTTCGGAGGTGTTGATGGGAATTTCTAAAGGTATAATGGGACGCCTCCA AGTTGCTGAATTCAACCTCAATGGCTCTATGCAACGCGAAAATGAGCTGAAATCAAAAGTTAAAAATTTCATAGAACAAC TTAAGGGTAAAGATGCTGCTTTAGAGAAGCTTGAGAAATGTAATGTTCAATATCTCAAGGAAAATTCTGAGGTGTTGGCT TTGAGGGAAAAGGTGAAATTTCTTGAAGAAGAACGAAAAGATTTTGAGCATCGGATAAATGCTTTGACAGAAGAAAATGA AGCATGTCATGAACAACTCATTGAGGCGGAAAGCTTTGTCGAGTCTCTAAAAGAAAGCATTGACATAGCAGAAAATCGGG CGGAGAATGCAGAAGCAAAGGTCACACAGTTAACTGAGACCAACTTGGAACTTACTGAAGAGCTGAATTTCCTTAAAGGG AGTGCTAGCACTGCAGAGAAAAAGGTTGGTTCACTAGAGAAGCAACTAAGAGAATTAGATATCCAGCTACAGAATGCAAA GGCATCTTCTGAAGCAAGTCAAGAACAGCAGAATATGTTATACACAGCAATATGGGATATGGAAATTTTAATTGAAGAGC TAAAATCAAAGGTTTCAAATGCTGAAAGTAATAAAGATAGTGCAGAAGAGCAATGCATTGTGCTATCTGAGACTAACTTT GAACTAAATAAAGAATTGGATCTCCTGAGGTCCAGAATGAGTAGCCTGAAAACATCTTTCGATCAAGCTAGAAAATCAAA ATTATCAAGTGCAAAAGAAATTGATACTGGAACTAAGTTCATCATGGATATGATAGCACAGCTCGCCACTGAAAGGGGGC GCATCAATAAACAGGTTAGAACTTCTTTAGTTTTCTAGCTAAATTTGAACTCTGGTTTTAATTTTTTTTAAGAAAAGGAA ACCACTATATTTGTCATTTATAGATTTGTGTTTACTCGACGGGTACCTGAAGTTTAAGTTAGTCAAAGGTAAAGTCCAGT GTTTCAAGTTATCTCAGTTTGGTCTGTCTGTGCTTATTTAATGCAATTTTGCTCACCTGAACTCTGTATACTAAGACCAC ATTTAATTGGACTAGAACATTCAAGGACTCAAATTGTAGAAATTATGCCTTGAAGGACCGAACTGAGAAAATTTTATATT CTGAGGAACAAAGTAATAGTTTCTACTTTTATGTAACAGTATCCGTGTTGCGTTTGATATTCGTGCTGTGTTTGTGGTTC TCAGATGGATAATTTGCTAAAAGAAACTATATTGGACTTATGACTGCCATTGGTTCCAGTCACTATGTTTTGTATAATTA AATTAGAACTTGAATTTGTAAATTTTCTTGGCAGTAGGATGCTCAAAGTGTGATAACTTTTGAGTTATCAACAAATCATT GGTTCTTTTCTGTTAGAAGTCCCACATTGGCTAGAGATAAGGCCAATCAAGTGTTTATAAGGGTTGTGCAAACCTCAACT CCCGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTATCAGAGCCTATCCTAGATTCATTTGTTG TGTGGAGACCTCCCATATTTGGGCCACCCGTTGTTGTTCCCACGTTCCAGTCTGTTCAATCCTGGACGTGAGGGGGTGTG TTAGAAGTCCCACATTGGCTAGAGATAAGGCCAATCAAGTGTTTATAAGGGTTGTGCAAACCTCAACTCCCGAGCTAGCT TTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATTTTCCCAAAAAATTTAGGGGTATATTATTTAACCGAGTCGGAGC TGATACCACTAACAGGACGTTAACATTCTTACCACTATGTTCTTCCTGCAGCTAGAGGCTTTAAAACAGGAAAATAAAAG TTTGGTAAAAAAGTTAACTGGGACCAAAATTGGTGTCCCTCTAGATGCATGCACCAATGAACTAAATAGCAGAAATGAAG ATCAAGCTTCCAACATTGACTCAAGCAATGATAGCTGTACAAAATTATCTGATGAAGAAGGAAGAGAACACTTTGATAAA ACCTTTCAGGCAGGTATCTTTTCATCAGGCTAATATTTTATACCAGTTGATAATTGATATGATATTCTTACTTTGAATAG TTCTGTATTCATTAATGTTTTAATGTCCTACATGAATTGGTAGTTTGCTTTGGAGTGGAGCAAAATGTCCTACATGAATC ATTACCCAGATGGACTTCTATATATTGCTGTAGATACATTACAAATTAGAGATTTGAATTTATGTTAATCTGGAATTTAC AAATTGGGCCTTGTTTTGATAGAATAGTATAAAAAGTTAACTTTGAGATCAACTCTTAGTTTAGCTTAGTAACATTTTTA CTTAGATACTAAAGGTTTCCCTCGTTCTTGGTTTCTATTATTAGGTGGGTGAACCATCAGAAGGCGCAAGTTCTGAAACT AAAGTAACACCATCTATTTCACCAAATAAGTCTGCAATTTGGAGAAACTTCACATTTGTTTCATTGGCAATTTTTATCCC ACTGGTTTCTGTGTTAGCCTTCTGCATGTTGTACATAGAAACGTGTCCTTTCTGAAAGCTTTTGGTGGCTAAGTCATGAC CTAGCATGTAGAAAATTTGTTGTTTTGTGCAGTTGTGCTTCTCTCAAGTCTTTTAGATTGTGTATTGTTTGTATATTCAT CTATTTATGTGATCTTAGAGTGGATGTAAACTAATATTGCAATTCTTTTGTTGATTATTCTATCACGAGTGCTTACCAGA TGAAGAGCTTGTCTCATAAAGGTGCAAATTATTAAGATATTGAGAGATGCAACTATGATAGAAAGATGAATAGTTGGGGG ATTCTGCCCCTCCAATGTGAGGGAAGTTTGATAGGGTATCTTGTTTATAACAGTACTAAAGCAAGATATGGTGTTTACAG TAAATGGCATGTTTGTTTGTAACCAAGATAATTATGTTGATTTTATGTCAATATCAAATTAACATTCCATCGTTTAATAT TATTTAAAGTTGATCGACCATACAAAGTCCAACCAACCACTCTAAGTTGAGTGTAGCTATTTGGATACAGTGGGGTGGTG CTTCGCTTTTGATTTAGTAGACCACTTGAGTAGACACTCTAGCGCCCATGTTACCAAGTGAGTATGTCAAGTAGGGTTTA AGTTAGATTGTGTGTATCATGTAGTCCCTCCTCATACAGGAAGCGACCTAAGCGTGGTGAGCATGTCAAGTAGGGTTTAA GTTAGATCACGTGTTGAATGTCCCAGGTTCATTCAACATCATGGGATTCCTAGACAGCCTAGATCGCGGTGAGCCCTTCG ATCACCCGGGTCAAAAGTATCATTCATATAGACGAGCAAACAATGGATCAAGTGATCAACATTATGCCACCTGCTTTGTA CCTCCTCAAGCGTGGTGTTTGGTCCTAGGGGAGTGGGTCGTCTACCTTTAGTGAGGGGTAAGAATATTGGGAGAAGTGAT ACATAGTAGTCACTCATGAAAAACATTGATCATAGGGCCTAAGTTCGACACACGATCGCAGTGTATTGTTAATGTAGTAT AAGCTTAAACTATCAAACCTAATACAACGTATCAAACAAGTCATAAGAATATCATTCATTAAAAAAATAGTAATCGAC
CDS sequence (LotjaGi2g1v0288000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGAATTTGCTAACAAAGTTCAAGGCGGCTTTAATGCTGGAGATACAGCTTTTGGGAAACTTCACTCACTCAAAGG GTTCTCAACTAAAGAAAATGATATGCAAGAAATGGAGATGTCCCTGCAAGCTTTAACAGAAATAGACCACCGCTTAGCCT ATTCTTCTGAGAAGCTGGTGAACTTGCATGCACTTTATATTTATCTGTTGGCCCGTGAAAATGATCTTGAACCAATGGAT TCAAAGAATGACCTCATCTTGGCAAATATGTTTGAGAAGGCAATGACATCAGATCTATTGTCTGGCATTTTAGATTCTGA GGTAAGAGAGCTGGACAATTTCATCGACACTCTACAGGAAGAAATTGTTGATGCTCGTCATAAAATATTTTCATGCAGAC ATCTGACTGAGGTTTACTTTATAATGGATGAAAAATTGCACGACTCGGAAGAGTCCGTGAAGCAGTTTCAACAGCAGTTA TTGGAGTTGAAGATGCAATCATCCCAGTTGCAGAAAACCCTTGTGGCTTTCCAACATGAGAGTTGGGAAACGGGGAAGAC CTTGAGTTTATCAGAAAATGGTCAGCTGATAGATGCTAAAGCAAAATCCAAGGATCAGATGGTTGAACAACGAAGATATA TTCTGCGAATGCTTGAGAAGTCCTTAGCACGGGAGCTAGATCTTGAAAAGAAGCTAGCAGAGTCAAGAAAAAATGAAGAG CTAAAGTTGAAACTCCGCTACACGGAACAAGTAGCATTTTATATGGAAGAAGCAGCGGAAGTAGTTTGGGGGAGATTTCT AGAGGCAGACAATGCTTCGGAGGTGTTGATGGGAATTTCTAAAGGTATAATGGGACGCCTCCAAGTTGCTGAATTCAACC TCAATGGCTCTATGCAACGCGAAAATGAGCTGAAATCAAAAGTTAAAAATTTCATAGAACAACTTAAGGGTAAAGATGCT GCTTTAGAGAAGCTTGAGAAATGTAATGTTCAATATCTCAAGGAAAATTCTGAGGTGTTGGCTTTGAGGGAAAAGGTGAA ATTTCTTGAAGAAGAACGAAAAGATTTTGAGCATCGGATAAATGCTTTGACAGAAGAAAATGAAGCATGTCATGAACAAC TCATTGAGGCGGAAAGCTTTGTCGAGTCTCTAAAAGAAAGCATTGACATAGCAGAAAATCGGGCGGAGAATGCAGAAGCA AAGGTCACACAGTTAACTGAGACCAACTTGGAACTTACTGAAGAGCTGAATTTCCTTAAAGGGAGTGCTAGCACTGCAGA GAAAAAGGTTGGTTCACTAGAGAAGCAACTAAGAGAATTAGATATCCAGCTACAGAATGCAAAGGCATCTTCTGAAGCAA GTCAAGAACAGCAGAATATGTTATACACAGCAATATGGGATATGGAAATTTTAATTGAAGAGCTAAAATCAAAGGTTTCA AATGCTGAAAGTAATAAAGATAGTGCAGAAGAGCAATGCATTGTGCTATCTGAGACTAACTTTGAACTAAATAAAGAATT GGATCTCCTGAGGTCCAGAATGAGTAGCCTGAAAACATCTTTCGATCAAGCTAGAAAATCAAAATTATCAAGTGCAAAAG AAATTGATACTGGAACTAAGTTCATCATGGATATGATAGCACAGCTCGCCACTGAAAGGGGGCGCATCAATAAACAGCTA GAGGCTTTAAAACAGGAAAATAAAAGTTTGGTAAAAAAGTTAACTGGGACCAAAATTGGTGTCCCTCTAGATGCATGCAC CAATGAACTAAATAGCAGAAATGAAGATCAAGCTTCCAACATTGACTCAAGCAATGATAGCTGTACAAAATTATCTGATG AAGAAGGAAGAGAACACTTTGATAAAACCTTTCAGGCAGGTGGGTGA
Protein sequence (LotjaGi2g1v0288000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDEFANKVQGGFNAGDTAFGKLHSLKGFSTKENDMQEMEMSLQALTEIDHRLAYSSEKLVNLHALYIYLLARENDLEPMD SKNDLILANMFEKAMTSDLLSGILDSEVRELDNFIDTLQEEIVDARHKIFSCRHLTEVYFIMDEKLHDSEESVKQFQQQL LELKMQSSQLQKTLVAFQHESWETGKTLSLSENGQLIDAKAKSKDQMVEQRRYILRMLEKSLARELDLEKKLAESRKNEE LKLKLRYTEQVAFYMEEAAEVVWGRFLEADNASEVLMGISKGIMGRLQVAEFNLNGSMQRENELKSKVKNFIEQLKGKDA ALEKLEKCNVQYLKENSEVLALREKVKFLEEERKDFEHRINALTEENEACHEQLIEAESFVESLKESIDIAENRAENAEA KVTQLTETNLELTEELNFLKGSASTAEKKVGSLEKQLRELDIQLQNAKASSEASQEQQNMLYTAIWDMEILIEELKSKVS NAESNKDSAEEQCIVLSETNFELNKELDLLRSRMSSLKTSFDQARKSKLSSAKEIDTGTKFIMDMIAQLATERGRINKQL EALKQENKSLVKKLTGTKIGVPLDACTNELNSRNEDQASNIDSSNDSCTKLSDEEGREHFDKTFQAGG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 626 | 623 | 2.6E-282 | ||
| PANTHER | 4 | 626 | 623 | 2.6E-282 | ||
| Coils | 108 | 128 | 21 | - | – | |
| Coils | 146 | 173 | 28 | - | – | |
| SUPERFAMILY | 318 | 573 | 256 | 2.73E-9 | – | |
| Coils | 332 | 415 | 84 | - | – | |
| Gene3D | 380 | 470 | 91 | 4.3E-6 | – | |
| Coils | 423 | 457 | 35 | - | – | |
| Coils | 465 | 499 | 35 | - | – | |
| Coils | 546 | 573 | 28 | - | – | |
| MobiDBLite | 594 | 628 | 35 | - | – | |
| MobiDBLite | 608 | 622 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0288000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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