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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0291000 |
| Transcript ID | LotjaGi2g1v0291000.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional uridylyltransferase/uridylyl-removing enzyme; TAIR: AT1G69040.2 ACT domain repeat 4; Swiss-Prot: sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4; TrEMBL-Plants: tr|I1JEJ6|I1JEJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0291000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76462472..76466753) extracted from Lotus japonicus Gifu genome v1.2.
TAATTTTTAAATCAATATTTTTTAGGGTATCAAATTCTTTTCCACCCATGTGGTTCATTACACCCTCCTGCTCACTTTAA CACCCCTCACATGTACCACACCCCTCCCATTCCACCGCAAAACCATTCTCACTAACATGCGTCGTCGGTTCTCTCATTGA AGTAGTAACATAACATTCATTCGGTTTCTGAACAGTAGTAACAGAAACAGGAAACAAATCAAAGAAAATAAGCAAAAAAA TGGAATAACATAAAGAGAGAGAAAGAAAGAAAGAGAGAAGACAGTGACATAGAAAGAGAAAGAGAACCTGCAGTTTTTTG AGTACTTTTTCAAGTTGCAGGTTTTGGAGCATCGTGTCGGGTTGGTTCTGATTTTCTTTTATTTTTTTTCCCTTTTTTCT CTTTTTCATTTTTGTTCATTTTATCAACAAAATTTATAATTTGTTATTGTTGATTACTTTATTTAGCACTATTTTAGAGA GAAGATCAAAAGTGTCTATGTGAGATCCTTGTGGGGTGTTTAAAGTTTAAATTTTTTAATATACCCACATGTTTTTCTGT ATATATATATATCCACTGTTGCTTTGAATTGAAACCACCACAAAGCTTCTTCCTTTGAGAGACCAGAACAAGAATTACTC AGAAAACTGTAATGGGTATGTGTTGTTTCTTCCAAATTTGTTTCCTTTTTGGTTTTTTTCATCTGGGTTTTGTGAATTTG TGTATGTTGTTGTTTGCTTCTTGGGTTATGGTCACAATTGGGTTCTGGGTTTTCAAGTCTTTTGATTTGGTGTCTTCTTC TTGTGTTGACTCTCTTTGCCTGTTCCTGTGGCCCTCACTCTCTTCTGGCTTGTTGGGGTTTCATTGGACTAATGGGTTCT GTTCTGTGATTCCTTCTTTTTAGAATATTAGTAACATTTAACAGCTAAGCACTTTTTTTGGGTCCTGGCTTTTCTTCATT ACTTGGTTATTCTTCATCTCTTTACTATTGGCCACTATCTTTCACCCACCTCACTTTGTCCCCTCTCACAAGAGCTTCCC AAAGAGGGTTTTTTCTCCATCATTATCCCCTTTTTTCTTACTATCTATATCTATATATATATATATATATATTTATTGAG TTTCACAAGTTGTTATGTGAGTTCTGTTTGTTTCTGTTTCCATGTTCTATCTTGTGATTGGTTTGTTTTCTCTGTTGTAG CTTTTATTTCAGAGGTTAACATGAGCTTCTCTAGCTATATGGATGATGAATATGAGAAACTCTTCAGGAGAATGAACCCT CCCAGGTACTACTAAATTTCACTTCTTATTTGATGTAAGAAAGCAATTTTCTTTTTCCCTTTTGAGAGAAAAGAAGATTT GAATGATTCTATCCTTACTTATTGGTCCACTTGCTATCTTGTCTTGTCAGGGTTGTAATTGATAATGATGCCTTGAAAAA TGCCACTGTCATACGGGTATGCCTATTTCCTCTTGTTCTTGTTCTTCCTTTTGTGGACTGCAATTACTCCTTTTGTGATT GATGAAAAGCTTTTCCATGTCTTAATGTTACTAAGTCAAATTGTTTTTGCAGGTTGATAGTGCAAACAAACATGGAATAC TTCTCGAAGTTGTTCAAATCCTCACTGATTTAAACCTTATCATCACTAAGGCTTACATATCTTCTGATGGTGGATGGTTT ATGGATGGTAATTTAATTCTTCAATATAGACTAATTTCTATCACATTTTCTATTAAACTTTACATTGATATAAATTTTGG GGGGTGAAGTTGAATAATTTTGTTCTTGTCTTTCAGTTTTTAATGTCACTGGCCAAGATGGAAACAAGGTTACAGATGAA GCCATTTTGGATTACATTCATAAGGTGTGTGTCTCATTTGGGATTCTAAAACTTCTTCTCTTTAATTCAATGTACTACTA GTGATTATACCTGTGTTTGATGCTGTTTATGTTTCTAGGCTCTTGGTCCTGAATCTTGTGTTACATCTCCCGTGAGATCT GTTGGGGTTAAGCAAACATTAGACCACACTGCAATAGAGCTTATGGGAACTGATAGGCCAGGGCTGCTTTCAGAAGTGAG TGCTGTTCTCACCAACCTCAAGTGTAACATAGTGAATGCAGAGGTGTGGACTCACAACACCCGTGCAGCTGCTGTGATGC ACGTGAGTGACGAAGAAACCGGATCCGCGATAACTGACCCGGAGAGGCTTTCTCTAATCAAGGAGCTTCTGAGTAATGTG CTTGGTGGTGGGAATAAGTGGAGGGGAGCCAAGACGGTTGTGGCTGATGAAGTCACACACACTGAGAGAAGGCTTCACCA GATGATGTTTGCTGATAGAGATTATGAACGTGTTGATGATGATGACTTTGATGAGAAGCAAAGACCAAATGTGACTGTGG TGAACTGGTCTGACAAGGATTATTCTGTGGTTACCATCATATCCAAGGATAGGCCAAAGCTTCTCTTTGACACCGTTTGT ACTTTGACAGACATGCAGTATGTGGTTTTTCATGCTAATATTGATGCTGAGGGGCCACAAGCATATCAGGTATAACATTT TTCCACTTTGTTCTGCACACATACATGGACACAGATGGGATATTCCTTTATTTTGTTGCTTGGTCTAAGGTTTATGGTCT GTTTGTCTTTTTAAGAACATTGGCTAAATGTTTTATGGTTGTATATGTACTGTGTAGGAATATTACATAAGGCATATTGA CGGGTCCCCTGTAAAATCAGATGCAGAGAGACAAAGAGTGATTCAATGTCTTGAGGCTGCAATTGAGAGAAGAGTTTCTG AGGTGAGGGACTTTATGTTATCTATGATTTCCTGCTTTAGTTTGCTCAGAATTGGAAACCTGCATATGGAACTCATCCAG CCACGTTTTTCATTGTTACCCTTGTTAAATATTATTTTTCAAAGCTGTGATTTATTTTTATTCTTCATTGAAAATTAGGT TGACCATGACCCTTTGTATTTGATATCATGTGAACAACACCTTGTAATGGTCGTCCAAGATTAGTTGAATTGCAAATGAA GGAACTTTGACTCCAATTGTCATGCCCCACTACCAAGTTGATTTTCTCATTGAAGACCGAAATAGACTTATTCAACCTGA TAGTATCTTTTTCTTTTTGTTAATAGTTAGTCTATTTTGAAGACAAGCCACAATTTTGTTGGCTTGTCTAAAACTAAACC ATATTTTAAGTGAACAACAACCCTTCTTTGTGTATCTAATTGTTTTATATCTCATTATTGTACTTTTTCTCTTCAATTCT GCTAAACCATATTTTAGTTAACAGAGAGTAACCCTTTCTTTCTATAGATTGTATTTTATATCATTGGTTAGTGTCCTTTG CTCCTAAATTCTGCTAAACTTATATTATTTTTAGTCAACAAATCTTGTGCAAGTTAAATAGTCTTTTCTTATTTGTATGC CAGTTAGGTATTTTTGGTTTATCTCTTTATCAACTACCCCTTTTGATTAGTCTCCTTCTAATTCTTAAGATTATTAACTT GACTTTGCTATTTCTTGATTCAGGGTTTGAAGCTAGAACTCTGCACCACTGACAGAGTGGGACTACTATCTAATGTCACA CGCATCTTCAGAGAGAACAGCTTAACAGTTACAAGAGCAGAAGTAACCACCAAAGGAGACAAAGCTGTGAACACCTTCTA TGTTAGTGGTGCTTCTGGTTACCTTGTGGATTCCAAGACCATAGAATCTATTCGGCAAGCAATTGGAAACACTATACTTA AAGTAAAGGGTACCCCTGATGAGTTGAAATCTACCCACCAGGATTCTCCTACCAGATCTCTCTTTAGTGGCCTTTTCAAG TCCAGATCTTTTGTGAACTTTGGCTTGGTTAAGTCTTATTCTTGAACCTGGAGAAAGCAATTATATGTGAGTGATAATGA GATCTCCTATCTTGTACAGTGAAAATGCTCAAGATGCAAAAAAGCTTACTAGGTGAAGTGTGACTTTAGTTTAGGGTGTA GAAATACCAAGCATATCTTAGGCTTAAACTTAGGATTAGTGTTTGGTTTGTAAATTCTTAACCCCTCCCCTGCTTTAGCT TAGTTTGTGATGGATCAAATCCAATCGCTAGTTGGAGTGATGAAAGCAAAGAGAACCTCAATTGTGTAAACCTTGAAACA TAGTTTCAAGGATCATCATTTGTACATAATTTAATTTAATTTCCAGCAGCAGTTATATTTTGCTTATCTTCCTTGTCTTT TACTTATCTTGACAATTCTGCTTGCTAATTCTGGCATTTGGC
CDS sequence (LotjaGi2g1v0291000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTTATTTCAGAGGTTAACATGAGCTTCTCTAGCTATATGGATGATGAATATGAGAAACTCTTCAGGAGAATGAA CCCTCCCAGGGTTGTAATTGATAATGATGCCTTGAAAAATGCCACTGTCATACGGGTTGATAGTGCAAACAAACATGGAA TACTTCTCGAAGTTGTTCAAATCCTCACTGATTTAAACCTTATCATCACTAAGGCTTACATATCTTCTGATGGTGGATGG TTTATGGATGTTTTTAATGTCACTGGCCAAGATGGAAACAAGGTTACAGATGAAGCCATTTTGGATTACATTCATAAGGC TCTTGGTCCTGAATCTTGTGTTACATCTCCCGTGAGATCTGTTGGGGTTAAGCAAACATTAGACCACACTGCAATAGAGC TTATGGGAACTGATAGGCCAGGGCTGCTTTCAGAAGTGAGTGCTGTTCTCACCAACCTCAAGTGTAACATAGTGAATGCA GAGGTGTGGACTCACAACACCCGTGCAGCTGCTGTGATGCACGTGAGTGACGAAGAAACCGGATCCGCGATAACTGACCC GGAGAGGCTTTCTCTAATCAAGGAGCTTCTGAGTAATGTGCTTGGTGGTGGGAATAAGTGGAGGGGAGCCAAGACGGTTG TGGCTGATGAAGTCACACACACTGAGAGAAGGCTTCACCAGATGATGTTTGCTGATAGAGATTATGAACGTGTTGATGAT GATGACTTTGATGAGAAGCAAAGACCAAATGTGACTGTGGTGAACTGGTCTGACAAGGATTATTCTGTGGTTACCATCAT ATCCAAGGATAGGCCAAAGCTTCTCTTTGACACCGTTTGTACTTTGACAGACATGCAGTATGTGGTTTTTCATGCTAATA TTGATGCTGAGGGGCCACAAGCATATCAGGAATATTACATAAGGCATATTGACGGGTCCCCTGTAAAATCAGATGCAGAG AGACAAAGAGTGATTCAATGTCTTGAGGCTGCAATTGAGAGAAGAGTTTCTGAGGGTTTGAAGCTAGAACTCTGCACCAC TGACAGAGTGGGACTACTATCTAATGTCACACGCATCTTCAGAGAGAACAGCTTAACAGTTACAAGAGCAGAAGTAACCA CCAAAGGAGACAAAGCTGTGAACACCTTCTATGTTAGTGGTGCTTCTGGTTACCTTGTGGATTCCAAGACCATAGAATCT ATTCGGCAAGCAATTGGAAACACTATACTTAAAGTAAAGGGTACCCCTGATGAGTTGAAATCTACCCACCAGGATTCTCC TACCAGATCTCTCTTTAGTGGCCTTTTCAAGTCCAGATCTTTTGTGAACTTTGGCTTGGTTAAGTCTTATTCTTGA
Protein sequence (LotjaGi2g1v0291000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFISEVNMSFSSYMDDEYEKLFRRMNPPRVVIDNDALKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGW FMDVFNVTGQDGNKVTDEAILDYIHKALGPESCVTSPVRSVGVKQTLDHTAIELMGTDRPGLLSEVSAVLTNLKCNIVNA EVWTHNTRAAAVMHVSDEETGSAITDPERLSLIKELLSNVLGGGNKWRGAKTVVADEVTHTERRLHQMMFADRDYERVDD DDFDEKQRPNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIRHIDGSPVKSDAE RQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVSGASGYLVDSKTIES IRQAIGNTILKVKGTPDELKSTHQDSPTRSLFSGLFKSRSFVNFGLVKSYS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 448 | 437 | 6.7E-251 | ||
| PANTHER | 12 | 448 | 437 | 6.7E-251 | – | |
| SUPERFAMILY | 39 | 107 | 69 | 1.41E-12 | – | |
| CDD | 41 | 111 | 71 | 2.1168E-36 | – | |
| Pfam | 42 | 102 | 61 | 2.2E-7 | ||
| ProSiteProfiles | 43 | 122 | 80 | 11.595 | ||
| Gene3D | 127 | 200 | 74 | 2.1E-12 | – | |
| SUPERFAMILY | 128 | 200 | 73 | 1.59E-14 | – | |
| CDD | 130 | 203 | 74 | 1.9725E-35 | – | |
| ProSiteProfiles | 131 | 218 | 88 | 11.809 | ||
| Pfam | 132 | 197 | 66 | 3.8E-8 | ||
| CDD | 261 | 335 | 75 | 9.80487E-42 | – | |
| ProSiteProfiles | 263 | 339 | 77 | 6.569 | ||
| SUPERFAMILY | 337 | 407 | 71 | 2.71E-10 | – | |
| Gene3D | 340 | 420 | 81 | 4.0E-8 | – | |
| ProSiteProfiles | 341 | 417 | 77 | 12.367 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0291000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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