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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0291000 |
| Transcript ID | LotjaGi2g1v0291000.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional uridylyltransferase/uridylyl-removing enzyme; TAIR: AT1G69040.2 ACT domain repeat 4; Swiss-Prot: sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4; TrEMBL-Plants: tr|I1JEJ6|I1JEJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0291000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76462541..76466703) extracted from Lotus japonicus Gifu genome v1.2.
GCTCACTTTAACACCCCTCACATGTACCACACCCCTCCCATTCCACCGCAAAACCATTCTCACTAACATGCGTCGTCGGT TCTCTCATTGAAGTAGTAACATAACATTCATTCGGTTTCTGAACAGTAGTAACAGAAACAGGAAACAAATCAAAGAAAAT AAGCAAAAAAATGGAATAACATAAAGAGAGAGAAAGAAAGAAAGAGAGAAGACAGTGACATAGAAAGAGAAAGAGAACCT GCAGTTTTTTGAGTACTTTTTCAAGTTGCAGGTTTTGGAGCATCGTGTCGGGTTGGTTCTGATTTTCTTTTATTTTTTTT CCCTTTTTTCTCTTTTTCATTTTTGTTCATTTTATCAACAAAATTTATAATTTGTTATTGTTGATTACTTTATTTAGCAC TATTTTAGAGAGAAGATCAAAAGTGTCTATGTGAGATCCTTGTGGGGTGTTTAAAGTTTAAATTTTTTAATATACCCACA TGTTTTTCTGTATATATATATATCCACTGTTGCTTTGAATTGAAACCACCACAAAGCTTCTTCCTTTGAGAGACCAGAAC AAGAATTACTCAGAAAACTGTAATGGGTATGTGTTGTTTCTTCCAAATTTGTTTCCTTTTTGGTTTTTTTCATCTGGGTT TTGTGAATTTGTGTATGTTGTTGTTTGCTTCTTGGGTTATGGTCACAATTGGGTTCTGGGTTTTCAAGTCTTTTGATTTG GTGTCTTCTTCTTGTGTTGACTCTCTTTGCCTGTTCCTGTGGCCCTCACTCTCTTCTGGCTTGTTGGGGTTTCATTGGAC TAATGGGTTCTGTTCTGTGATTCCTTCTTTTTAGAATATTAGTAACATTTAACAGCTAAGCACTTTTTTTGGGTCCTGGC TTTTCTTCATTACTTGGTTATTCTTCATCTCTTTACTATTGGCCACTATCTTTCACCCACCTCACTTTGTCCCCTCTCAC AAGAGCTTCCCAAAGAGGGTTTTTTCTCCATCATTATCCCCTTTTTTCTTACTATCTATATCTATATATATATATATATA TATTTATTGAGTTTCACAAGTTGTTATGTGAGTTCTGTTTGTTTCTGTTTCCATGTTCTATCTTGTGATTGGTTTGTTTT CTCTGTTGTAGCTTTTATTTCAGAGGTTAACATGAGCTTCTCTAGCTATATGGATGATGAATATGAGAAACTCTTCAGGA GAATGAACCCTCCCAGGTACTACTAAATTTCACTTCTTATTTGATGTAAGAAAGCAATTTTCTTTTTCCCTTTTGAGAGA AAAGAAGATTTGAATGATTCTATCCTTACTTATTGGTCCACTTGCTATCTTGTCTTGTCAGGGTTGTAATTGATAATGAT GCCTTGAAAAATGCCACTGTCATACGGGTATGCCTATTTCCTCTTGTTCTTGTTCTTCCTTTTGTGGACTGCAATTACTC CTTTTGTGATTGATGAAAAGCTTTTCCATGTCTTAATGTTACTAAGTCAAATTGTTTTTGCAGGTTGATAGTGCAAACAA ACATGGAATACTTCTCGAAGTTGTTCAAATCCTCACTGATTTAAACCTTATCATCACTAAGGCTTACATATCTTCTGATG GTGGATGGTTTATGGATGGTAATTTAATTCTTCAATATAGACTAATTTCTATCACATTTTCTATTAAACTTTACATTGAT ATAAATTTTGGGGGGTGAAGTTGAATAATTTTGTTCTTGTCTTTCAGTTTTTAATGTCACTGGCCAAGATGGAAACAAGG TTACAGATGAAGCCATTTTGGATTACATTCATAAGGTGTGTGTCTCATTTGGGATTCTAAAACTTCTTCTCTTTAATTCA ATGTACTACTAGTGATTATACCTGTGTTTGATGCTGTTTATGTTTCTAGGCTCTTGGTCCTGAATCTTGTGTTACATCTC CCGTGAGATCTGTTGGGGTTAAGCAAACATTAGACCACACTGCAATAGAGCTTATGGGAACTGATAGGCCAGGGCTGCTT TCAGAAGTGAGTGCTGTTCTCACCAACCTCAAGTGTAACATAGTGAATGCAGAGGTGTGGACTCACAACACCCGTGCAGC TGCTGTGATGCACGTGAGTGACGAAGAAACCGGATCCGCGATAACTGACCCGGAGAGGCTTTCTCTAATCAAGGAGCTTC TGAGTAATGTGCTTGGTGGTGGGAATAAGTGGAGGGGAGCCAAGACGGTTGTGGCTGATGAAGTCACACACACTGAGAGA AGGCTTCACCAGATGATGTTTGCTGATAGAGATTATGAACGTGTTGATGATGATGACTTTGATGAGAAGCAAAGACCAAA TGTGACTGTGGTGAACTGGTCTGACAAGGATTATTCTGTGGTTACCATCATATCCAAGGATAGGCCAAAGCTTCTCTTTG ACACCGTTTGTACTTTGACAGACATGCAGTATGTGGTTTTTCATGCTAATATTGATGCTGAGGGGCCACAAGCATATCAG GTATAACATTTTTCCACTTTGTTCTGCACACATACATGGACACAGATGGGATATTCCTTTATTTTGTTGCTTGGTCTAAG GTTTATGGTCTGTTTGTCTTTTTAAGAACATTGGCTAAATGTTTTATGGTTGTATATGTACTGTGTAGGAATATTACATA AGGCATATTGACGGGTCCCCTGTAAAATCAGATGCAGAGAGACAAAGAGTGATTCAATGTCTTGAGGCTGCAATTGAGAG AAGAGTTTCTGAGGTGAGGGACTTTATGTTATCTATGATTTCCTGCTTTAGTTTGCTCAGAATTGGAAACCTGCATATGG AACTCATCCAGCCACGTTTTTCATTGTTACCCTTGTTAAATATTATTTTTCAAAGCTGTGATTTATTTTTATTCTTCATT GAAAATTAGGTTGACCATGACCCTTTGTATTTGATATCATGTGAACAACACCTTGTAATGGTCGTCCAAGATTAGTTGAA TTGCAAATGAAGGAACTTTGACTCCAATTGTCATGCCCCACTACCAAGTTGATTTTCTCATTGAAGACCGAAATAGACTT ATTCAACCTGATAGTATCTTTTTCTTTTTGTTAATAGTTAGTCTATTTTGAAGACAAGCCACAATTTTGTTGGCTTGTCT AAAACTAAACCATATTTTAAGTGAACAACAACCCTTCTTTGTGTATCTAATTGTTTTATATCTCATTATTGTACTTTTTC TCTTCAATTCTGCTAAACCATATTTTAGTTAACAGAGAGTAACCCTTTCTTTCTATAGATTGTATTTTATATCATTGGTT AGTGTCCTTTGCTCCTAAATTCTGCTAAACTTATATTATTTTTAGTCAACAAATCTTGTGCAAGTTAAATAGTCTTTTCT TATTTGTATGCCAGTTAGGTATTTTTGGTTTATCTCTTTATCAACTACCCCTTTTGATTAGTCTCCTTCTAATTCTTAAG ATTATTAACTTGACTTTGCTATTTCTTGATTCAGGGTTTGAAGCTAGAACTCTGCACCACTGACAGAGTGGGACTACTAT CTAATGTCACACGCATCTTCAGAGAGAACAGCTTAACAGTTACAAGAGCAGAAGTAACCACCAAAGGAGACAAAGCTGTG AACACCTTCTATGTTAGTGGTGCTTCTGGTTACCTTGTGGATTCCAAGACCATAGAATCTATTCGGCAAGCAATTGGAAA CACTATACTTAAAGTAAAGGGTACCCCTGATGAGTTGAAATCTACCCACCAGGATTCTCCTACCAGATCTCTCTTTAGTG GCCTTTTCAAGTCCAGATCTTTTGTGAACTTTGGCTTGGTTAAGTCTTATTCTTGAACCTGGAGAAAGCAATTATATGTG AGTGATAATGAGATCTCCTATCTTGTACAGTGAAAATGCTCAAGATGCAAAAAAGCTTACTAGGTGAAGTGTGACTTTAG TTTAGGGTGTAGAAATACCAAGCATATCTTAGGCTTAAACTTAGGATTAGTGTTTGGTTTGTAAATTCTTAACCCCTCCC CTGCTTTAGCTTAGTTTGTGATGGATCAAATCCAATCGCTAGTTGGAGTGATGAAAGCAAAGAGAACCTCAATTGTGTAA ACCTTGAAACATAGTTTCAAGGATCATCATTTGTACATAATTTAATTTAATTTCCAGCAGCAGTTATATTTTGCTTATCT TCC
CDS sequence (LotjaGi2g1v0291000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCTTCTCTAGCTATATGGATGATGAATATGAGAAACTCTTCAGGAGAATGAACCCTCCCAGGGTTGTAATTGATAA TGATGCCTTGAAAAATGCCACTGTCATACGGGTTGATAGTGCAAACAAACATGGAATACTTCTCGAAGTTGTTCAAATCC TCACTGATTTAAACCTTATCATCACTAAGGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTTTTTAATGTCACT GGCCAAGATGGAAACAAGGTTACAGATGAAGCCATTTTGGATTACATTCATAAGGCTCTTGGTCCTGAATCTTGTGTTAC ATCTCCCGTGAGATCTGTTGGGGTTAAGCAAACATTAGACCACACTGCAATAGAGCTTATGGGAACTGATAGGCCAGGGC TGCTTTCAGAAGTGAGTGCTGTTCTCACCAACCTCAAGTGTAACATAGTGAATGCAGAGGTGTGGACTCACAACACCCGT GCAGCTGCTGTGATGCACGTGAGTGACGAAGAAACCGGATCCGCGATAACTGACCCGGAGAGGCTTTCTCTAATCAAGGA GCTTCTGAGTAATGTGCTTGGTGGTGGGAATAAGTGGAGGGGAGCCAAGACGGTTGTGGCTGATGAAGTCACACACACTG AGAGAAGGCTTCACCAGATGATGTTTGCTGATAGAGATTATGAACGTGTTGATGATGATGACTTTGATGAGAAGCAAAGA CCAAATGTGACTGTGGTGAACTGGTCTGACAAGGATTATTCTGTGGTTACCATCATATCCAAGGATAGGCCAAAGCTTCT CTTTGACACCGTTTGTACTTTGACAGACATGCAGTATGTGGTTTTTCATGCTAATATTGATGCTGAGGGGCCACAAGCAT ATCAGGAATATTACATAAGGCATATTGACGGGTCCCCTGTAAAATCAGATGCAGAGAGACAAAGAGTGATTCAATGTCTT GAGGCTGCAATTGAGAGAAGAGTTTCTGAGGGTTTGAAGCTAGAACTCTGCACCACTGACAGAGTGGGACTACTATCTAA TGTCACACGCATCTTCAGAGAGAACAGCTTAACAGTTACAAGAGCAGAAGTAACCACCAAAGGAGACAAAGCTGTGAACA CCTTCTATGTTAGTGGTGCTTCTGGTTACCTTGTGGATTCCAAGACCATAGAATCTATTCGGCAAGCAATTGGAAACACT ATACTTAAAGTAAAGGGTACCCCTGATGAGTTGAAATCTACCCACCAGGATTCTCCTACCAGATCTCTCTTTAGTGGCCT TTTCAAGTCCAGATCTTTTGTGAACTTTGGCTTGGTTAAGTCTTATTCTTGA
Protein sequence (LotjaGi2g1v0291000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFSSYMDDEYEKLFRRMNPPRVVIDNDALKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVT GQDGNKVTDEAILDYIHKALGPESCVTSPVRSVGVKQTLDHTAIELMGTDRPGLLSEVSAVLTNLKCNIVNAEVWTHNTR AAAVMHVSDEETGSAITDPERLSLIKELLSNVLGGGNKWRGAKTVVADEVTHTERRLHQMMFADRDYERVDDDDFDEKQR PNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIRHIDGSPVKSDAERQRVIQCL EAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVSGASGYLVDSKTIESIRQAIGNT ILKVKGTPDELKSTHQDSPTRSLFSGLFKSRSFVNFGLVKSYS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 440 | 436 | 6.9E-251 | ||
| PANTHER | 5 | 440 | 436 | 6.9E-251 | – | |
| SUPERFAMILY | 31 | 99 | 69 | 1.37E-12 | – | |
| CDD | 33 | 103 | 71 | 2.01887E-36 | – | |
| Pfam | 34 | 94 | 61 | 2.1E-7 | ||
| ProSiteProfiles | 35 | 114 | 80 | 11.595 | ||
| Gene3D | 119 | 192 | 74 | 2.0E-12 | – | |
| SUPERFAMILY | 120 | 192 | 73 | 1.55E-14 | – | |
| CDD | 122 | 195 | 74 | 1.90866E-35 | – | |
| ProSiteProfiles | 123 | 210 | 88 | 11.809 | ||
| Pfam | 124 | 189 | 66 | 3.7E-8 | ||
| CDD | 253 | 327 | 75 | 1.10603E-41 | – | |
| ProSiteProfiles | 255 | 331 | 77 | 6.569 | ||
| SUPERFAMILY | 329 | 399 | 71 | 2.62E-10 | – | |
| Gene3D | 332 | 412 | 81 | 3.9E-8 | – | |
| ProSiteProfiles | 333 | 409 | 77 | 12.367 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0291000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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