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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0291000 |
| Transcript ID | LotjaGi2g1v0291000.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bifunctional uridylyltransferase/uridylyl-removing enzyme; TAIR: AT1G69040.2 ACT domain repeat 4; Swiss-Prot: sp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR4; TrEMBL-Plants: tr|I1JEJ6|I1JEJ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0291000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76463845..76466356) extracted from Lotus japonicus Gifu genome v1.2.
CTTACTTATTGGTCCACTTGCTATCTTGTCTTGTCAGGGTTGTAATTGATAATGATGCCTTGAAAAATGCCACTGTCATA CGGGTATGCCTATTTCCTCTTGTTCTTGTTCTTCCTTTTGTGGACTGCAATTACTCCTTTTGTGATTGATGAAAAGCTTT TCCATGTCTTAATGTTACTAAGTCAAATTGTTTTTGCAGGTTGATAGTGCAAACAAACATGGAATACTTCTCGAAGTTGT TCAAATCCTCACTGATTTAAACCTTATCATCACTAAGGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGGTAATT TAATTCTTCAATATAGACTAATTTCTATCACATTTTCTATTAAACTTTACATTGATATAAATTTTGGGGGGTGAAGTTGA ATAATTTTGTTCTTGTCTTTCAGTTTTTAATGTCACTGGCCAAGATGGAAACAAGGTTACAGATGAAGCCATTTTGGATT ACATTCATAAGGTGTGTGTCTCATTTGGGATTCTAAAACTTCTTCTCTTTAATTCAATGTACTACTAGTGATTATACCTG TGTTTGATGCTGTTTATGTTTCTAGGCTCTTGGTCCTGAATCTTGTGTTACATCTCCCGTGAGATCTGTTGGGGTTAAGC AAACATTAGACCACACTGCAATAGAGCTTATGGGAACTGATAGGCCAGGGCTGCTTTCAGAAGTGAGTGCTGTTCTCACC AACCTCAAGTGTAACATAGTGAATGCAGAGGTGTGGACTCACAACACCCGTGCAGCTGCTGTGATGCACGTGAGTGACGA AGAAACCGGATCCGCGATAACTGACCCGGAGAGGCTTTCTCTAATCAAGGAGCTTCTGAGTAATGTGCTTGGTGGTGGGA ATAAGTGGAGGGGAGCCAAGACGGTTGTGGCTGATGAAGTCACACACACTGAGAGAAGGCTTCACCAGATGATGTTTGCT GATAGAGATTATGAACGTGTTGATGATGATGACTTTGATGAGAAGCAAAGACCAAATGTGACTGTGGTGAACTGGTCTGA CAAGGATTATTCTGTGGTTACCATCATATCCAAGGATAGGCCAAAGCTTCTCTTTGACACCGTTTGTACTTTGACAGACA TGCAGTATGTGGTTTTTCATGCTAATATTGATGCTGAGGGGCCACAAGCATATCAGGTATAACATTTTTCCACTTTGTTC TGCACACATACATGGACACAGATGGGATATTCCTTTATTTTGTTGCTTGGTCTAAGGTTTATGGTCTGTTTGTCTTTTTA AGAACATTGGCTAAATGTTTTATGGTTGTATATGTACTGTGTAGGAATATTACATAAGGCATATTGACGGGTCCCCTGTA AAATCAGATGCAGAGAGACAAAGAGTGATTCAATGTCTTGAGGCTGCAATTGAGAGAAGAGTTTCTGAGGTGAGGGACTT TATGTTATCTATGATTTCCTGCTTTAGTTTGCTCAGAATTGGAAACCTGCATATGGAACTCATCCAGCCACGTTTTTCAT TGTTACCCTTGTTAAATATTATTTTTCAAAGCTGTGATTTATTTTTATTCTTCATTGAAAATTAGGTTGACCATGACCCT TTGTATTTGATATCATGTGAACAACACCTTGTAATGGTCGTCCAAGATTAGTTGAATTGCAAATGAAGGAACTTTGACTC CAATTGTCATGCCCCACTACCAAGTTGATTTTCTCATTGAAGACCGAAATAGACTTATTCAACCTGATAGTATCTTTTTC TTTTTGTTAATAGTTAGTCTATTTTGAAGACAAGCCACAATTTTGTTGGCTTGTCTAAAACTAAACCATATTTTAAGTGA ACAACAACCCTTCTTTGTGTATCTAATTGTTTTATATCTCATTATTGTACTTTTTCTCTTCAATTCTGCTAAACCATATT TTAGTTAACAGAGAGTAACCCTTTCTTTCTATAGATTGTATTTTATATCATTGGTTAGTGTCCTTTGCTCCTAAATTCTG CTAAACTTATATTATTTTTAGTCAACAAATCTTGTGCAAGTTAAATAGTCTTTTCTTATTTGTATGCCAGTTAGGTATTT TTGGTTTATCTCTTTATCAACTACCCCTTTTGATTAGTCTCCTTCTAATTCTTAAGATTATTAACTTGACTTTGCTATTT CTTGATTCAGGGTTTGAAGCTAGAACTCTGCACCACTGACAGAGTGGGACTACTATCTAATGTCACACGCATCTTCAGAG AGAACAGCTTAACAGTTACAAGAGCAGAAGTAACCACCAAAGGAGACAAAGCTGTGAACACCTTCTATGTTAGTGGTGCT TCTGGTTACCTTGTGGATTCCAAGACCATAGAATCTATTCGGCAAGCAATTGGAAACACTATACTTAAAGTAAAGGGTAC CCCTGATGAGTTGAAATCTACCCACCAGGATTCTCCTACCAGATCTCTCTTTAGTGGCCTTTTCAAGTCCAGATCTTTTG TGAACTTTGGCTTGGTTAAGTCTTATTCTTGA
CDS sequence (LotjaGi2g1v0291000.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGTTTTTAATGTCACTGGCCAAGATGGAAACAAGGTTACAGATGAAGCCATTTTGGATTACATTCATAAGGCTCT TGGTCCTGAATCTTGTGTTACATCTCCCGTGAGATCTGTTGGGGTTAAGCAAACATTAGACCACACTGCAATAGAGCTTA TGGGAACTGATAGGCCAGGGCTGCTTTCAGAAGTGAGTGCTGTTCTCACCAACCTCAAGTGTAACATAGTGAATGCAGAG GTGTGGACTCACAACACCCGTGCAGCTGCTGTGATGCACGTGAGTGACGAAGAAACCGGATCCGCGATAACTGACCCGGA GAGGCTTTCTCTAATCAAGGAGCTTCTGAGTAATGTGCTTGGTGGTGGGAATAAGTGGAGGGGAGCCAAGACGGTTGTGG CTGATGAAGTCACACACACTGAGAGAAGGCTTCACCAGATGATGTTTGCTGATAGAGATTATGAACGTGTTGATGATGAT GACTTTGATGAGAAGCAAAGACCAAATGTGACTGTGGTGAACTGGTCTGACAAGGATTATTCTGTGGTTACCATCATATC CAAGGATAGGCCAAAGCTTCTCTTTGACACCGTTTGTACTTTGACAGACATGCAGTATGTGGTTTTTCATGCTAATATTG ATGCTGAGGGGCCACAAGCATATCAGGAATATTACATAAGGCATATTGACGGGTCCCCTGTAAAATCAGATGCAGAGAGA CAAAGAGTGATTCAATGTCTTGAGGCTGCAATTGAGAGAAGAGTTTCTGAGGGTTTGAAGCTAGAACTCTGCACCACTGA CAGAGTGGGACTACTATCTAATGTCACACGCATCTTCAGAGAGAACAGCTTAACAGTTACAAGAGCAGAAGTAACCACCA AAGGAGACAAAGCTGTGAACACCTTCTATGTTAGTGGTGCTTCTGGTTACCTTGTGGATTCCAAGACCATAGAATCTATT CGGCAAGCAATTGGAAACACTATACTTAAAGTAAAGGGTACCCCTGATGAGTTGAAATCTACCCACCAGGATTCTCCTAC CAGATCTCTCTTTAGTGGCCTTTTCAAGTCCAGATCTTTTGTGAACTTTGGCTTGGTTAAGTCTTATTCTTGA
Protein sequence (LotjaGi2g1v0291000.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVFNVTGQDGNKVTDEAILDYIHKALGPESCVTSPVRSVGVKQTLDHTAIELMGTDRPGLLSEVSAVLTNLKCNIVNAE VWTHNTRAAAVMHVSDEETGSAITDPERLSLIKELLSNVLGGGNKWRGAKTVVADEVTHTERRLHQMMFADRDYERVDDD DFDEKQRPNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIRHIDGSPVKSDAER QRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVSGASGYLVDSKTIESI RQAIGNTILKVKGTPDELKSTHQDSPTRSLFSGLFKSRSFVNFGLVKSYS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 367 | 367 | 4.4E-208 | ||
| PANTHER | 1 | 367 | 367 | 4.4E-208 | – | |
| Gene3D | 46 | 119 | 74 | 1.5E-12 | – | |
| SUPERFAMILY | 47 | 119 | 73 | 1.16E-14 | – | |
| CDD | 49 | 122 | 74 | 7.57415E-36 | – | |
| ProSiteProfiles | 50 | 137 | 88 | 11.809 | ||
| Pfam | 51 | 116 | 66 | 2.8E-8 | ||
| CDD | 180 | 254 | 75 | 6.38858E-42 | – | |
| ProSiteProfiles | 182 | 258 | 77 | 6.569 | ||
| SUPERFAMILY | 256 | 326 | 71 | 1.96E-10 | – | |
| Gene3D | 259 | 339 | 81 | 2.9E-8 | – | |
| ProSiteProfiles | 260 | 336 | 77 | 12.367 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0291000.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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