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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0291300 |
| Transcript ID | LotjaGi2g1v0291300.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Adenine nucleotide alpha hydrolases-like superfamily protein, putative; TAIR: AT2G03720.2 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q9FKG5|PUB51_ARATH U-box domain-containing protein 51; TrEMBL-Plants: tr|A0A151TRW1|A0A151TRW1_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0291300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76526680..76531047) extracted from Lotus japonicus Gifu genome v1.2.
AGAATGGACCTACAGCTTGATGACAAGCACGTTCATGTGGAACAACACAAGGACCCTCCACAAAGGGAAAAATCAAAAGA AACCAAGAACTACACAAATGATTAGAAAAGTAAAAGAGAAAGCAAAGCAGAAATGAACTATGGCCCAGACCAACATTTTA GAAATTTTCTCATTGTTGCTCTTTCTCTGTTATAATAATTGGCGCCTTCTCCAACAACATTCCAAGACATGGGTAAGAGA GGAACAAGGTTACCAGGCTTCTGCCTTAACAGAATTAGGCCTCATGCCCGAGTGCGTTCGCCGCCTATACAAGCCAAGCT AGACACAAATGCCAGTGAAACTGATAAAAAAACTGAGAATTCCTGCAGTGCTTGTGAGGAAAAATCAGATGATGGGGTGA AACCAGGGTCTATGATTGGTAGGAAGATCATGATTGTGGTTGATTCTAGCCTTGAAGCCAAAGGTGCTGTGCAATGGGCA CTCACTCACACAGTTCAGAACCAGGACATTATAATTCTTCTTCATGTGATGAAGCCTTCTAAACAAGGTGCAAAGCTAAT CATACCATTGTTCATTCTTCAAATTTGAGTTAGTTTGATTATGACAGAAAGTGATCAGGTATGGTTCACTCAATGTAGCA GCCACTGAGGAAGGGTCCAGCAAGGAGATAGATCCAAGGGCTTATGAACTTGCTTCCTCCTTCAAGAACATGTGCAATGT GAAGATGCCAGAGGTGAGTTTAAATACCTTATGTAAATAGGCTCTATGGTATATACCATTATTGATAGTACTCAACGTTC TCTTAATACCATGTTTGGATGAGCTTCTTGTAACTGAGTTAATTCTGAAACCAAAAAGTTATTCAAAGAAGCTTCTACTC AAAATTGATTCTAGCTTATTAACGCCGGTTTCTGATGTGCCTCAAAATGTGAAATTAATAAAAAAGTATTAGGAAGGGCA TGTGAATTTGTTGCATTTTTATGAATCAAGAGTTCATCCCATGTTGGAAAGTTATTAATGTAAATCAGGGAGATATCCCG CGTGTGCATATATATTAAGGCTCATGTTAATGGAAATATTTTACTTTATATAAATAAGATAGTTAAAGGACGAGATTAAA TGATTCTGTTAGGTACAAATTGAGATTGCTGTTACAGAAGGAAAGGAAAAGGGTCCAACAATAGTGGAGGAAGCAAAGAA ACATGGCGCGGGGCTTCTGGTTTTGGGGCAGAAGAAGAGGTCCACAACGTGGCGTCTTCTAATGATGTGGGCAGGCAACA GAGTTACTGGTGGGGTGGTGGAGTATTGCATCCAGAATGCTCATTGCATGGCAATTGCTGTGAGAAGAAAAAGCAAGAAA ATTGGAGGCTACATGATTACTACGAAGCGTCACAAAGATTTCTGGCTCTTAGCTTAATCTATAGTCACAACACACAACTA TGGATCAATGTTGTCACCTTCAAGATTTTACAAGTAACTATATACCGTGTTGTTGTATCTGGAGTCCACAATGTTTATAC ATAATAAGGTGTCCGGCAATTGAGAAAATGTATGAAATTATGATTGGGAAGTAGCAAAGTGTCATTAAAACTATGGTTTC TGGTTATTGATTTCTGCTACATAATGGGTACAAGACCATAATACATTCTGGTCTGTGTCTAACCTGCACAACTTTTCACT AAATAGGAATGAGTCATTGCTTTTGACTCCTTATAACTGACAAAACAAACAAACTATTTGAAGAAATTAAGTCTTGATAT CTAATAGCAATGCATTGATACAATTTGGTTTCAGAATATCACATTCACCTGCCAACAGGCATCATGATATCAGAGAACTC AACACCAGGTGTCAAATCTGAATACCCCAGCAAACCAGTGTTATCATTCCTATGTACACCAGTACCTGAATTTTTCTGAA GTTGCAATGCCTGAACAAGTTTCTCTAGCACCTCACCAATGGATGGCCTCTCCACCCCTCTTTCTGCCAAACATTTCATT GCAACTTCTATATACAGCTCAAAGCACTCCTTCACTATGTTTCCTTCTAAGTTGGAGTCCACTATTTGCTCTAAATTCCC ATTCTCAAAGCAGAACACAACCCATTCAGCCAAGTTTGCACACTCATCATCATCTTCACCAGGAACTATAGCAGGCCTGG CAGTCAGCACCTCCAATAACACCACCCCAAGTGAGTATAAATCAGATTTCTCAGTCAACTTGTTGCACTGATAGTACTCT GGATCTAGGTAACCAATGGTACCCTTGATATTGGTGGTGCTTAAGGAATTGTAGCTTGACTTTGACACCCCAAAATCTGA TATTTTGGCCACCCAATTTTGATCTAAGAGTATGTTTGTTGTCTTGATGTCGCGGTGAATGATCCTTTGCTGTGTGCCAG TGTGCAGGTAATGCAAACCTCTTGCAACTCCAATGCATATCTCCAGACGTTGAATCCATGACAAAGGGGGTTGATCTTGA TCCCTCTGCCTCAAATGAAGATGATCATAGAGACTTCCATGAGCCATGAAGTCATAGACCAGTATCATCTCCCCATCTTC ATTGCAGTAACCCAAAAGTGAGACTAGGTTGCTATGCCGGAGCTGCGAGAGCAATTTAATCTCTGTCTCAAACTCCATAT CACCTTGTTCTGACATTGGATTGGCACGTTTTATGGCTACAGAAGTTACCCCACCATCAAAGCTACCCTTGTAGACACTG CCAAATCCACCTGTGCCTATAAGTAGAGCCTCATCAAAGTTCTTTGTTGCCACTTTTATCGCTCTCAATGAAAATGATGA CTTGTTTTCAATTTGATTAGGTGGAAGTGCAACAAGACCAAACCATGATATGATCCTTCTAGGTCTAATCACCTTCAACC TGCATAGAACTAAGCACAGGAGAATTGGTAGTGAAACTCCAAAAAGGATAAATATGAGTTTCTTTGAGTTTCTTAATTTT GCAGCATGAGGAGCATTTTTTTCAGCTGATCCAAACTTCCTTTGGGGAGGGTTAAGCCCTGCAAGATTCTTCTTATCAAA CCTGCTCAGTTTAAAAATCTCCACACCATTCAAGAAAGCATTGTAGTACATAGGTTTAGAATACTTATAAGGGTGCAGAT CTAGCCACAGATCCTGATTTGCCTCATTATCTTGAGGAACCGTCACAACATAGTCTTGGTACAATGCAACTCCAGGCCCT CCACTCAGGGCAATTGGATCAAACTCCTTTTCAGCTGTTTGATTATTCAAAAACACAGAGAAAACTACCTCATTTTCCTT TATTATATCTTGAAAAGTTTCACAGAAGTGAAGCCTAACTAGATAATTGAAGCCAGAATCAACAGGGAAAAGCCATGTTT GATTGTAATTTAAATTAACAAGGCCATTCTCAAAGGTAGCCATTGAACGTGATGTGCGGTAGACGTTTTCCGGGGCAGTA TATGCTGGAATATCATCTGTATACACAATTGGCACGGTCATGTTATAGGGTTGAATCCCAAAAGCCCCAAATGTGTAACC AGAATCAGTATCCCAAGTGCGAAACATCCCGGTATCATATTTAGGTAGAATTTGCTCACCTCCTACATTCAATCTGTATA AATTTTCCATGGCAGAATCATTATAAAGGTACAACAATTTGGGATAGTGGCCAACTAAAGGAAGATTGGCATCATCACCA CGAATGTACAAACCAAGGGGCATAGAAACAACTTCAATCCCATTCACAAATGCATAGGCATCAGAAGCATTAGATGATGC TGTGAAAGTAAGTTCCAAACTGCTCCCACTTACATGGACAATGAATTCTTTCATGAAATATGCTAAGTTGAGGTAATCAG CATTGAGGGAAACACTGAAGTTATGGAGAAGAGTGAAGTTACCAGCAGTGACTGATAAAAAAGCATTGGAGACATTGAAA TCTAAGTAGGAAGCTGGGTAGAAGTGAAGGCGAATGAATTTAGGACCTGGAGTTACATTGAATGTGTAGGCGAATTGAGA CTGAAAGATCCTAGCAGTCATGTAGGGAACTTCAGGAATAGATTGAGTTGAAGGAGCTCTAGCTGTTAAGGACTTGGTGT GTTCTGCATTAGAATGAACATGTGGTGAAGCAATGTCACCGGTCCAGTTTCTTCCATCATATTCTAGAAGTCCAGATGTG CTGGAGCCACAGTTTAGAACTATGTTCTCTGAGGGAACATAACTGCCCTTGTCAGCAACAGCAATTAGTTGTAGGTGTGA GGGATACAAGTAAAAGAAAAAAATGTACATGAAACATGAGACAGTGTTCATATTCTCTTCATCAGCTAAACACAGATTTC AGAAAAAAATACTAGTAATCTACTTTTTCAGAGAGAACAAATGTAATT
CDS sequence (LotjaGi2g1v0291300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAAGAGAGGAACAAGGTTACCAGGCTTCTGCCTTAACAGAATTAGGCCTCATGCCCGAGTGCGTTCGCCGCCTAT ACAAGCCAAGCTAGACACAAATGCCAGTGAAACTGATAAAAAAACTGAGAATTCCTGCAGTGCTTGTGAGGAAAAATCAG ATGATGGGGTGAAACCAGGGTCTATGATTGGTAGGAAGATCATGATTGTGGTTGATTCTAGCCTTGAAGCCAAAGGTGCT GTGCAATGGGCACTCACTCACACAGTTCAGAACCAGGACATTATAATTCTTCTTCATGTGATGAAGCCTTCTAAACAAGC CACTGAGGAAGGGTCCAGCAAGGAGATAGATCCAAGGGCTTATGAACTTGCTTCCTCCTTCAAGAACATGTGCAATGTGA AGATGCCAGAGGTACAAATTGAGATTGCTGTTACAGAAGGAAAGGAAAAGGGTCCAACAATAGTGGAGGAAGCAAAGAAA CATGGCGCGGGGCTTCTGGTTTTGGGGCAGAAGAAGAGGTCCACAACGTGGCGTCTTCTAATGATGTGGGCAGGCAACAG AGTTACTGGTGGGGTGGTGGAGTATTGCATCCAGAATGCTCATTGCATGGCAATTGCTGTGAGAAGAAAAAGCAAGAAAA TTGGAGGCTACATGATTACTACGAAGCGTCACAAAGATTTCTGGCTCTTAGCTTAA
Protein sequence (LotjaGi2g1v0291300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKRGTRLPGFCLNRIRPHARVRSPPIQAKLDTNASETDKKTENSCSACEEKSDDGVKPGSMIGRKIMIVVDSSLEAKGA VQWALTHTVQNQDIIILLHVMKPSKQATEEGSSKEIDPRAYELASSFKNMCNVKMPEVQIEIAVTEGKEKGPTIVEEAKK HGAGLLVLGQKKRSTTWRLLMMWAGNRVTGGVVEYCIQNAHCMAIAVRRKSKKIGGYMITTKRHKDFWLLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 231 | 231 | 7.3E-136 | – | |
| MobiDBLite | 23 | 57 | 35 | - | – | |
| MobiDBLite | 34 | 57 | 24 | - | – | |
| Gene3D | 63 | 211 | 149 | 1.2E-20 | ||
| SUPERFAMILY | 65 | 211 | 147 | 1.34E-16 | – | |
| Pfam | 65 | 208 | 144 | 7.8E-23 | ||
| CDD | 66 | 207 | 142 | 6.6584E-21 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0291300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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