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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0293800 |
| Transcript ID | LotjaGi2g1v0293800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome P450 family protein; TAIR: AT1G13710.1 cytochrome P450, family 78, subfamily A, polypeptide 5; Swiss-Prot: sp|Q9LMX7|C78A5_ARATH Cytochrome P450 78A5; TrEMBL-Plants: tr|A0A151TFB3|A0A151TFB3_CAJCA Cytochrome P450 78A4; Found in the gene: LotjaGi2g1v0293800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76856609..76858756) extracted from Lotus japonicus Gifu genome v1.2.
CCACCTTCTATATAACCAGTAACTAACCTTCCAACTCTCTTCGTCTTCCTGTGTGACACTCCTTCTATTTTTCTCTTCTC AAACACCATCAACGTTCAAGAGAGAAAAAAAACACAGAGGAAGAAACAAAAAAAATGTCACAAGAGTTTCACCTTCTTCA CTTCCATTATCTTCTTCAGCCACCATTTCTGAGCTTCCAAACTGCACTATGCCTATTCATCACCATCCTCGCCTTCCTCT ACTGGCTTGCTCCTGGTGGGCTGGCTTGGGCCCTCAGCAAGTCCTCAGCCCGAACACTCATCCCAGGCCCATCCGGGCTT CTCAGCCTTTTCTCTGGCCCAACTCCGCACCGAGTCCTGGCTAAGCTCGCCAGGAGCTACCGTGCGGAGTCGCTGATGGC GTTCTCTGTTGGTCTAACCCGGTTCGTTATTTCCAGCGAACCGGAAACCGCTAAGGAGATTCTGGGAAGTACCGGTTTTG CTGATAGGCCGGTGAAGGAGTCTGCTTATGAGCTTCTGTTTCACAGAGCAATGGGGTTTGCTCCTTACGGCGAGTACTGG AGGAATCTCCGGAGAATCTCCGCTACTCACTTGTTCTGCCCCAGGAGGTTGTCAAGCTTTGGAAGCTTCAGGAGTGAGGT GGGGTTGAAGATGGTGGAGCGGTTAGCTGGTTTGATGGCGGAAACTGGTCGAGTTGAGGTGAAAAACGTGCTCCACTTCG GGTCGTTGAACAATGTGATGATGACGGTGTTTGGGAAGCGGTATGAATTTTTCGATGGTGAAGGTGTTGAGCTTGAGGAA ATGGTGAGTGAAGGGTATGAGTTGTTGGGGGTGTTTAACTGGAGTGACCATTTTCCTGTTCTCGTGTGGTTGGACTTGCA GGGAGTGAGGAGAAGGTGCAGGGTTTTGGTTTCGAAGGTGAATGCGTTTGTTGGGAAAATCATTGAAGAGCATAGAGTGA AAAGAGTGTCTGGTGAATATGAGAAGGGAAGTGGAGTTGGTGATTTTGTTGATGTGTTGCTTGATTTGGAGAATAAGGAC AAGCTCAGTGATTCTGATATGGTTGCAGTTCTCTGGGTATTGATTGTGTTCTTTTATTTATTTGAATGTTAATTGTTAGT TCTATTTGTATTCAATGTTGTGATGGTGTGTTTGTTTGTGTAGGAAATGATTTTCAGAGGAACTGACACTGTTGCTATTA CACTGGAATGGATTTTGGCTAGAATGGTTCTTCACCCTGAGATACAAGCAAAGGCACAAGAAGAGATTGAAGCTGTTGTT GGGAATTCAAGGCTTGTTTCTGATGATGACATTCCTAACCTTCGCTATTTGCAGTGCATTGTGAAGGAGGCACTGAGGGT GCACCCACCAGGGCCACTGCTATCATGGGCTCGCCTAGCGGTGCACGATGTCCACGTCGGTGATAAGCTTGTTCCCGCCG GCACCACCGCCATGGTTAACATGTGGGCCATCACACATGATGAGAAGGTGTGGGCGGAGCCAGAGGAGTTCAAGCCAGAG AGATTCATGGAGGAGGATGTGAGCATCATGGGGTCGGATTTGAGGCTTGCTCCCTTTGGTGCTGGGAGAAGAGTGTGTCC TGGGAAGGCCATGGGTTTGGCTTCTATTCATCTCTGGCTTGCTCAGTTGCTTCAGAGCTTCAAATGGGTTCCATGTGATG ATTCCCCTGTTGATTTGACTGAGTACTTGAAACTCTCTATGGAGATGAAGACACCATTGGTGTGCAGGGTTATCCCTAGG GTTGATGCTTAATTAGGCTTTTGGTTGATTTGCTAATTAAGTTAAGTAGGGTACTCTAGATATATTATATTATATATTAG GCTGTAATCTTCTTAATCTAATTGTGAACTCACCTTTAAGTGTGTGGACCTTTTGTATGTTTTTGGGGTTGTTAAGCTTT GTAGGGTAGTTGACAATCCAGAAAAGGGTGGTGGAAGTTTTAATTGTATGAGTTTGTTCCTAATGAAATTGAAGGTTAGG TCATGTAGTATTTGTGTTTGATGGTGCTCTTTCTGTGGTATTTGTTCTTTGCTTGCAAAATAGGAGCGTTTAAATCTAAT TAATGATTATGCGATCCAGATGTTCTTCATGTGTGTGTGAGTGTGTGACTGATTTTGGGAGACCCGTA
CDS sequence (LotjaGi2g1v0293800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCACAAGAGTTTCACCTTCTTCACTTCCATTATCTTCTTCAGCCACCATTTCTGAGCTTCCAAACTGCACTATGCCT ATTCATCACCATCCTCGCCTTCCTCTACTGGCTTGCTCCTGGTGGGCTGGCTTGGGCCCTCAGCAAGTCCTCAGCCCGAA CACTCATCCCAGGCCCATCCGGGCTTCTCAGCCTTTTCTCTGGCCCAACTCCGCACCGAGTCCTGGCTAAGCTCGCCAGG AGCTACCGTGCGGAGTCGCTGATGGCGTTCTCTGTTGGTCTAACCCGGTTCGTTATTTCCAGCGAACCGGAAACCGCTAA GGAGATTCTGGGAAGTACCGGTTTTGCTGATAGGCCGGTGAAGGAGTCTGCTTATGAGCTTCTGTTTCACAGAGCAATGG GGTTTGCTCCTTACGGCGAGTACTGGAGGAATCTCCGGAGAATCTCCGCTACTCACTTGTTCTGCCCCAGGAGGTTGTCA AGCTTTGGAAGCTTCAGGAGTGAGGTGGGGTTGAAGATGGTGGAGCGGTTAGCTGGTTTGATGGCGGAAACTGGTCGAGT TGAGGTGAAAAACGTGCTCCACTTCGGGTCGTTGAACAATGTGATGATGACGGTGTTTGGGAAGCGGTATGAATTTTTCG ATGGTGAAGGTGTTGAGCTTGAGGAAATGGTGAGTGAAGGGTATGAGTTGTTGGGGGTGTTTAACTGGAGTGACCATTTT CCTGTTCTCGTGTGGTTGGACTTGCAGGGAGTGAGGAGAAGGTGCAGGGTTTTGGTTTCGAAGGTGAATGCGTTTGTTGG GAAAATCATTGAAGAGCATAGAGTGAAAAGAGTGTCTGGTGAATATGAGAAGGGAAGTGGAGTTGGTGATTTTGTTGATG TGTTGCTTGATTTGGAGAATAAGGACAAGCTCAGTGATTCTGATATGGTTGCAGTTCTCTGGGAAATGATTTTCAGAGGA ACTGACACTGTTGCTATTACACTGGAATGGATTTTGGCTAGAATGGTTCTTCACCCTGAGATACAAGCAAAGGCACAAGA AGAGATTGAAGCTGTTGTTGGGAATTCAAGGCTTGTTTCTGATGATGACATTCCTAACCTTCGCTATTTGCAGTGCATTG TGAAGGAGGCACTGAGGGTGCACCCACCAGGGCCACTGCTATCATGGGCTCGCCTAGCGGTGCACGATGTCCACGTCGGT GATAAGCTTGTTCCCGCCGGCACCACCGCCATGGTTAACATGTGGGCCATCACACATGATGAGAAGGTGTGGGCGGAGCC AGAGGAGTTCAAGCCAGAGAGATTCATGGAGGAGGATGTGAGCATCATGGGGTCGGATTTGAGGCTTGCTCCCTTTGGTG CTGGGAGAAGAGTGTGTCCTGGGAAGGCCATGGGTTTGGCTTCTATTCATCTCTGGCTTGCTCAGTTGCTTCAGAGCTTC AAATGGGTTCCATGTGATGATTCCCCTGTTGATTTGACTGAGTACTTGAAACTCTCTATGGAGATGAAGACACCATTGGT GTGCAGGGTTATCCCTAGGGTTGATGCTTAA
Protein sequence (LotjaGi2g1v0293800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQEFHLLHFHYLLQPPFLSFQTALCLFITILAFLYWLAPGGLAWALSKSSARTLIPGPSGLLSLFSGPTPHRVLAKLAR SYRAESLMAFSVGLTRFVISSEPETAKEILGSTGFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFCPRRLS SFGSFRSEVGLKMVERLAGLMAETGRVEVKNVLHFGSLNNVMMTVFGKRYEFFDGEGVELEEMVSEGYELLGVFNWSDHF PVLVWLDLQGVRRRCRVLVSKVNAFVGKIIEEHRVKRVSGEYEKGSGVGDFVDVLLDLENKDKLSDSDMVAVLWEMIFRG TDTVAITLEWILARMVLHPEIQAKAQEEIEAVVGNSRLVSDDDIPNLRYLQCIVKEALRVHPPGPLLSWARLAVHDVHVG DKLVPAGTTAMVNMWAITHDEKVWAEPEEFKPERFMEEDVSIMGSDLRLAPFGAGRRVCPGKAMGLASIHLWLAQLLQSF KWVPCDDSPVDLTEYLKLSMEMKTPLVCRVIPRVDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| TMHMM | 17 | 39 | 23 | - | – | |
| Phobius | 20 | 39 | 20 | - | – | |
| PANTHER | 29 | 514 | 486 | 8.2E-78 | – | |
| Phobius | 40 | 516 | 477 | - | – | |
| Gene3D | 47 | 511 | 465 | 4.9E-111 | ||
| SUPERFAMILY | 57 | 513 | 457 | 7.47E-116 | ||
| Pfam | 69 | 500 | 432 | 4.5E-89 | ||
| PRINTS | 196 | 214 | 19 | 6.8E-38 | ||
| PRINTS | 308 | 325 | 18 | 6.8E-38 | ||
| PRINTS | 319 | 336 | 18 | 2.5E-9 | ||
| PRINTS | 328 | 354 | 27 | 6.8E-38 | ||
| PRINTS | 371 | 389 | 19 | 6.8E-38 | ||
| PRINTS | 372 | 383 | 12 | 2.5E-9 | ||
| PRINTS | 413 | 437 | 25 | 6.8E-38 | ||
| PRINTS | 449 | 459 | 11 | 6.8E-38 | ||
| PRINTS | 450 | 459 | 10 | 2.5E-9 | ||
| ProSitePatterns | 452 | 461 | 10 | - | ||
| PRINTS | 459 | 482 | 24 | 6.8E-38 | ||
| PRINTS | 459 | 470 | 12 | 2.5E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Molecular function | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi2g1v0293800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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