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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0294300 |
| Transcript ID | LotjaGi2g1v0294300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Magnesium transporter MRS2-like protein; TAIR: AT2G03620.1 magnesium transporter 3; Swiss-Prot: sp|Q9ZPR4|MRS25_ARATH Magnesium transporter MRS2-5; TrEMBL-Plants: tr|I1JEF4|I1JEF4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0294300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76911937..76915080) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGGAACACAAGGCCAGTATTATTCGTCCAGTCCACCTGAGTCTTCCTTACCTCATGACAGTGCTGGGAGGTCTTA CTTCAATGGGCAAGTTAGTCGTGGGCCTCATATATCAGGCTTGAAAAAGAGAGGTCACGGAAGTCGCTCATGGATAAAAA TTGATCAGGATGGAAATTCTGAGACCATGACTCTTGAAAAGGCCACTATTATGAGACATTGTTCTTTGCCTTCTAGAGAT CTCCGGCTATTGGATCCGATGTTCATATATCCTTCTACAATATTAGGACGGGAGAAGGCTATTGTGGTCAACCTTGAGGA AATCCGGTGTGTAATCACTGCTGATGAGGTCTTCCTAATGAACTCGTTGGATGGTAGTGTTGGTCAGTACAGGTCAGAAT TATGCAATCGCCTTCAGAAAGAAAAATCTGGTAAGGATTGCACCTCTTTTTGCTGTAACATATACATTTAGGAGTAAGGA AATTGGTGGGAAATATAACTTTTAAGTATCCAAGGTTCACTATGACTATATTAGCATATCTAATGGTCTTAAACCCTCGT CTGTTGTAGCACTATTTGGAAATAGGACTGAATGAAGAATAATGAGGGAAAGATATTGAGTGTTGTGAAACTGGATGTCT TTTCTTGGTATCAATTTCAAAGCTTAAATTGAATATGATAGTTCTTCTTTAGGTTTCAGTAACATCTGCTCCCAAGATAT TCTATTTTTCAAAACCTTTTTATGGAGGTAATTTATGCATAGAATCGCTTACTATGTCTTCCATTTTGAACAGAGGATCT ACCTTTTGAATTTAGGGCACTGGAGTTGGCTGTGGAATTGACATGCACATCTTTAGATTCTCAGGTATGAATTGATCAGA AACTCTATTTCTTGGGGAATCGTCCATGTTTTTGGCTGTGAATCTGGGATAATATATTTTCTTCATTGTGTTTACGTTAA AAATTGGTAGCAATGAGTTTATATGTTGCCACTGTTTAGGTTAAATTACGTATTTGAAAATATTTATTAGCTCAATTTGA TTATCCGTCCTATGTTTTGCTTGCAAATCCAGATAATTCACAAAACTTAATGGTGATTGCACTTTATTGACTGACCACAA CCTTTTCCACCATTCACTTCAGTTCTAACAAGATTCAGGCTTGGAAAAGCCCTAGGATTATTTCTTTCGAACTCAGGAAA TATAGGGAGAGAAAAGAATGTGCAATGAGATCCGAAACACAGACAAAAGAGGGCCGGTTTTAGATAGCAATATATGTTAG AAGATATAAGGATGGGCCTAGATCATTGTAAAAGAAAATTCAACGGTTCCAAACTAGGTATAATTTGGGGTTTGCAAATT TTTATTAAGTATTGGATTCAGGTAATTGCAAATTTATATAGCTTGCTAAATGCATATGGAATAGTCATTGGTTAAGCTAC CAGCCATATGTAAGTAATAAAGTTGTCTTCTTGAATCCTTTATGGACTGGGCGGGACATAAAGAAGATTATGTCCCGCCC AAAATGAACAATAAACCATTGAAGATAGCCATGGCGGGGAAGGCGACATAACGAGCTTCATAGCCCTCCCTCAGGTGATG GACCCACAAGCCAGCTGGAAGATTCCTTTGGATTTGTCTTATATGTACGGGGATTTGGGCCCTGATTGTCAGGCCCAAAT ATAGGAAAGATCCATATCATGACCACCCCCTCTATAAAAGGGGAGGTCACCCACTTGTACAAAACCAACTTTTTCAGCAT TAATGAGAATATTCCTTTTATGGTAGTTTTGCTATTTTAGTGCTCTGCTGGGGTTTACTTTTTGTCTTTCTCTTACGTAA GCTTGCCCTAGTACAGAACACTTTATAATAAGGGTCTTGTTTTGGTAGGTAAAAGATCTGGAAATGGAAATATATCCTGT ATTAGATGAACTAGCCTCAACTATCAGTACTCTCAATCTAGAACGTGTTCGAAGATTTAAAGGTCACCTCCTTGCTTTGA CTCAGAGAGTTCAGAAGGTTGATCAACGTAGAATTCTCATCCTTGGTTATTGCTACTATTCTTCCAGCTTTCTATCATCA CCTACCATTAGTAACTTATATTTAATTCACAGGTTCGTGATGAAATAGAACATCTCATGGATGATGATGGTGACATGGCG GAGATGTGCCTGACCGAGAAAAGGAGATCAGATACTTACCTTTCAAATGATGGTTTCCAGACTCGTACACCAGGTACAGA GACTTCAAAATCCGCTCCTGCTTCACCTGAGCGATCACTTAGTGGGGTCCAGATATTGCAAAGGGCATTCAGCAGTATTG CAAATTCTAGTAAACATGGTAGTTCAATAGGTTCGTCTGATAATGGTGAAAGGATTCAGCCACTGGAAATGTTGCTGGAA GCATACTTCGTCGTCATTGATAATACTCTTAACAAATTATTGTCGGTATGAAAAGTTTGATTTAGAGTGTTTCTTTTAAG TTATAATATTTATATGTTGGATGCCGTAGATAGTATATGCTAATATAACTAAGGCACTCATATGTAACATTAGATTAGAT CAGATCATGTATGCTTTCAGCTAACCAGCTGTTGTGTAGGAAAACTACTTGTGAACCCTGGTTATGATATTTACTAATGA GTTGTAACCATGATGACTTGTTGCATAAATTAGCTCTAGTAGCATAGACTTTTACTATTCAGGCATGTTGTTTTGTCCTG ATGATAAGTATATTTTTCTTTTGCTGGTTACTGCAGCTCAAAGAGTATATTGACGACACAGAAGATTTTATCAACATAAA ATTGGTAAGCTAAGATTAATAATCTGCAACATTCTGCTGTCCATTCCTTTATTTCTTTTATACTCTAAACTCTGCAAACT AGAGATAGTTACTTTTCACTCTATCTATTACAGGGAAATATTCAAAACCGCCTGATACAGTTTGAGTTACTTCTTACAGC AGCTACATTGGTAGCTGCAGTATTTGCTGCTGTGGCAGGAGTATTTGGAATGAACTTTGAAACAACAGTTTTTGACTATC CATCTGGATTCCATTGGGTTTTGGTAATTACTGGGATAGCTTGTGTGGCATTGTATTTCTCCTTCCTATTCTATTTTAGG TACAAGAAAGTGCTTCCAGCTTAA
CDS sequence (LotjaGi2g1v0294300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAGTGTTGGTCAGTACAGGTCAGAATTATGCAATCGCCTTCAGAAAGAAAAATCTGGATCTACCTTTTGAATTTAG GGCACTGGAGTTGGCTGTGGAATTGACATGCACATCTTTAGATTCTCAGGTAAAAGATCTGGAAATGGAAATATATCCTG TATTAGATGAACTAGCCTCAACTATCAGTACTCTCAATCTAGAACGTGTTCGAAGATTTAAAGGTCACCTCCTTGCTTTG ACTCAGAGAGTTCAGAAGGTTCGTGATGAAATAGAACATCTCATGGATGATGATGGTGACATGGCGGAGATGTGCCTGAC CGAGAAAAGGAGATCAGATACTTACCTTTCAAATGATGGTTTCCAGACTCGTACACCAGGTACAGAGACTTCAAAATCCG CTCCTGCTTCACCTGAGCGATCACTTAGTGGGGTCCAGATATTGCAAAGGGCATTCAGCAGTATTGCAAATTCTAGTAAA CATGGTAGTTCAATAGGTTCGTCTGATAATGGTGAAAGGATTCAGCCACTGGAAATGTTGCTGGAAGCATACTTCGTCGT CATTGATAATACTCTTAACAAATTATTGTCGCTCAAAGAGTATATTGACGACACAGAAGATTTTATCAACATAAAATTGG GAAATATTCAAAACCGCCTGATACAGTTTGAGTTACTTCTTACAGCAGCTACATTGGTAGCTGCAGTATTTGCTGCTGTG GCAGGAGTATTTGGAATGAACTTTGAAACAACAGTTTTTGACTATCCATCTGGATTCCATTGGGTTTTGGTAATTACTGG GATAGCTTGTGTGGCATTGTATTTCTCCTTCCTATTCTATTTTAGGTACAAGAAAGTGCTTCCAGCTTAA
Protein sequence (LotjaGi2g1v0294300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVLVSTGQNYAIAFRKKNLDLPFEFRALELAVELTCTSLDSQVKDLEMEIYPVLDELASTISTLNLERVRRFKGHLLAL TQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRSDTYLSNDGFQTRTPGTETSKSAPASPERSLSGVQILQRAFSSIANSSK HGSSIGSSDNGERIQPLEMLLEAYFVVIDNTLNKLLSLKEYIDDTEDFINIKLGNIQNRLIQFELLLTAATLVAAVFAAV AGVFGMNFETTVFDYPSGFHWVLVITGIACVALYFSFLFYFRYKKVLPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 224 | 224 | - | – | |
| Gene3D | 8 | 123 | 116 | 4.9E-25 | – | |
| PANTHER | 16 | 288 | 273 | 7.3E-143 | ||
| PANTHER | 16 | 288 | 273 | 7.3E-143 | – | |
| CDD | 18 | 286 | 269 | 8.88021E-65 | ||
| Coils | 77 | 97 | 21 | - | – | |
| MobiDBLite | 116 | 140 | 25 | - | – | |
| Gene3D | 154 | 220 | 67 | 1.8E-9 | – | |
| Pfam | 185 | 277 | 93 | 1.0E-6 | – | |
| TMHMM | 225 | 244 | 20 | - | – | |
| Phobius | 225 | 246 | 22 | - | – | |
| SUPERFAMILY | 226 | 278 | 53 | 9.29E-8 | – | |
| Gene3D | 227 | 285 | 59 | 5.2E-7 | – | |
| Phobius | 247 | 257 | 11 | - | – | |
| Phobius | 258 | 281 | 24 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 282 | 289 | 8 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0294300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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