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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0295800 |
| Transcript ID | LotjaGi2g1v0295800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-hydrolase superfamily protein; TAIR: AT2G32520.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q7DFU6|YGHX_ECOLI Putative uncharacterized protein YghX; TrEMBL-Plants: tr|I3S5W0|I3S5W0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0295800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77061623..77064311) extracted from Lotus japonicus Gifu genome v1.2.
CCTAAATTACTTAATGTTTGGTGACAGAACGGAACATGACAGAACGGAACGGAACAGAACAGAACAGGATGGAACATCAC AATGATGTTCTATGTGTTTGTGTTTGGTAACTCCAAGTCAATAAAACAAAACAGTGAAGTGAGAGAGAGACTGCTTCGCT CGGAATGTTGAGGGTTCTCAGATCTTCCGCTCCCAGATTCTTGACTAAAGCCCGTCGTCGTACCATTTCACCCTTTGCTC CTCCTCCTCCTCCTCGTTTCTCCTCGGCTCGTTACATCGATGATACTGCTGCTCCCTTCCAGAAAATCCAGATTCCAAGG GATATGAAAACAAGTGTGAGTCTCCCTCTTTGCTTTCATACACTGTTGATTGATTCTCTTTCCATGTATTTATTTCATAC GAGATTGATTGATTGATTTCATTGCGCGCTAATCTTCTGTTATGTTGTTGTTGTTTATAATGATTAGACATTTGATGGAT ATCTTGTTGGTGAGCACGACGCTCCTGGAATTGTTCTGCTTCAGGACTGGTTTGGTGTGGATTATCATGTCAAAAATCAT GCTTTGAGGATTTCTCAGCTTGGCCGTGGATTTAAAGTTCTTATTCCAGAGTAGGATGCATAATATTTCTTACTATTTGT GTCATATTCTGTATTGGGAATTTGGATCACTGATGGGTTTTACTTTTTCCCCAGTATGTACGGAGGAAACTACGGACAGC AACTGTTTTATGGAATTGATTGGGATGAAGCTCTGATGAAACTTGATTCTTCAACTACATGGCTTCAAAACAATGGTTCA AAAAAGGTTTGTCTCTTTCATGTGTTGTCAAGATGAAAAATTATTCTGCTTTATAATTTTCCTATCCACTACACTGTCCT GGTTAACATACATGTGTCTGAAGAGCCATTTTTGTTTCTATCACCATTCCAATGTTGCAAAAGGTTCTTCCTCTTCTTCA ACCCACAAAGACATAAATGAGCTTTTTGCCTAAGATTTATAGTGTGTTTGTTCATCCACTAGATTGGGTGATAAGAATGT GAGTTTGTTCATCCATTAGGATTTGGGTGATAAGAATGTGAGTTTGTTCATCCATTAGATTGGATGATGTGAATGTGATT TTTCTCAATCCAACAACTTTGCTAAATTGTCTTGGAAAGCCAAATATGTAAGTTGATTGTGCTTTCAACCGGAAACAAAT GTGAATTGATATTTCATTGTAACAGGTTGGTGTAACTGGCTTTGGTATGGGGGGTGCTCTCGCTATTGCCGGCTCTATCC GGTTTCCACCATCTTTTGATGCTATTGTATCTTTTCATGGCGCTCCTCCTCGGCAGGATGACCCTAGCTACGCCAGTGCT CCTGTTCAGGCTCACTTTGGGGAGCTCGACGATTTTGTTGGATTTTCGGATGTTAAGGTATGTTTGCAACGCACATTGCT GGCCATTTGCCTCTTCCTTGAGTTCCCTTTCGTCAGTTTATTTATATTATATCCGGTACATTATCCAAATAAATATCACT TCATTTTCTGATTGGTGTGGGAGGAGTTTCTGTACCTTCCAAATCCTACTAGTTTCTTTCTTAATTATGTGCAGTTTTCT GTTCTCTGACTAGAGAGAACACATGCTTGATGTTCTGAGTCAAAATCCTTTGATTCAAGAAACATCATTTTATGATATTG TTTGATGTCTCAGACTGCGAAGGAATTGGAGGAAAATTTTAAGGAATCTGAATATCCATATGAGGTACACATATATCCTG GCAAGGGACACGCATTTATGGACAGCATGATATTGCCCGATGAAGATGATGCTGAAGTTCAGCTCGCCTGGTCTCGCTTC AAGGAATGGATGACACGTTACTTGTATAGTGACCATGATTGCTGTTAAGCTCTAATTAAACATGGTGCTTCTTACTTTTG GGTTGTTACTTTTGAGATATTTGACTTGGAATAATTTTGAAACTGTTGTGGGGCTTCCGTATTAAGAAAATATGGTCTTT GGCTTATGGTGCCATTGTTCCTAAGTTCTGATCATGATGTTTTGCCTATAAGAAAACAAATTAAGGTTTTCCGTGAAAAG TTTTAAAAGTTTAAGACTGAGACTCATCATTCTTTGAGAATGTAAGGACGCAATTTTAGTTACTAAGTATAACAATAACA ATAACAAATTAATGCTTCTTATGTTTGAGGATTAATATGATTGGTCTTTCAATCCTCCGCCTCTACCACTCATATGCCCA TTGTTGATGTTTCCTTCATATTGTGATCCATTTGGTATTGGATAGTATTGGTCCTAGAATTTTTTATTTGTGAGAAATTG GATCCCTTTGCATTGGATTGGTTGGTTGCTGTCCTTTTTGCGTTTGGATGTGGCTGGAGTTCTGATTTTTGTGTGGCAGA TTTGGAAACAAAGATGCAATTTTTTGTTTGGCCAAGAACAACTTTCCTGTGTGGCCTTTCGGCTAACAGCTTCTGGTTTG CAGCAACAACTCTTGTGGATTCCTCTAACCTGCGGTTAGATCATTAGGTAGCTTGGCAATCTCCTATGTCTGGTTGGATT GCTTGCCAACCTCCATATTCCCGGGAATGTGTTTTCCAACCTTCTAACCTATGAAGCACGGACTCGGACACGGACACGGG CGGGAACGCCGACACGGCAAAACTCCAAAAAAATAGGATACGGGGACAC
CDS sequence (LotjaGi2g1v0295800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGAGGGTTCTCAGATCTTCCGCTCCCAGATTCTTGACTAAAGCCCGTCGTCGTACCATTTCACCCTTTGCTCCTCC TCCTCCTCCTCGTTTCTCCTCGGCTCGTTACATCGATGATACTGCTGCTCCCTTCCAGAAAATCCAGATTCCAAGGGATA TGAAAACAAGTACATTTGATGGATATCTTGTTGGTGAGCACGACGCTCCTGGAATTGTTCTGCTTCAGGACTGGTTTGGT GTGGATTATCATGTCAAAAATCATGCTTTGAGGATTTCTCAGCTTGGCCGTGGATTTAAAGTTCTTATTCCAGATATGTA CGGAGGAAACTACGGACAGCAACTGTTTTATGGAATTGATTGGGATGAAGCTCTGATGAAACTTGATTCTTCAACTACAT GGCTTCAAAACAATGGTTCAAAAAAGGTTGGTGTAACTGGCTTTGGTATGGGGGGTGCTCTCGCTATTGCCGGCTCTATC CGGTTTCCACCATCTTTTGATGCTATTGTATCTTTTCATGGCGCTCCTCCTCGGCAGGATGACCCTAGCTACGCCAGTGC TCCTGTTCAGGCTCACTTTGGGGAGCTCGACGATTTTGTTGGATTTTCGGATGTTAAGACTGCGAAGGAATTGGAGGAAA ATTTTAAGGAATCTGAATATCCATATGAGGTACACATATATCCTGGCAAGGGACACGCATTTATGGACAGCATGATATTG CCCGATGAAGATGATGCTGAAGTTCAGCTCGCCTGGTCTCGCTTCAAGGAATGGATGACACGTTACTTGTATAGTGACCA TGATTGCTGTTAA
Protein sequence (LotjaGi2g1v0295800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRVLRSSAPRFLTKARRRTISPFAPPPPPRFSSARYIDDTAAPFQKIQIPRDMKTSTFDGYLVGEHDAPGIVLLQDWFG VDYHVKNHALRISQLGRGFKVLIPDMYGGNYGQQLFYGIDWDEALMKLDSSTTWLQNNGSKKVGVTGFGMGGALAIAGSI RFPPSFDAIVSFHGAPPRQDDPSYASAPVQAHFGELDDFVGFSDVKTAKELEENFKESEYPYEVHIYPGKGHAFMDSMIL PDEDDAEVQLAWSRFKEWMTRYLYSDHDCC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 265 | 265 | 2.7E-93 | – | |
| PANTHER | 1 | 265 | 265 | 2.7E-93 | – | |
| SignalP_GRAM_POSITIVE | 1 | 18 | 18 | - | – | |
| Gene3D | 36 | 263 | 228 | 1.4E-38 | ||
| SUPERFAMILY | 55 | 263 | 209 | 2.15E-31 | ||
| Pfam | 59 | 262 | 204 | 3.5E-38 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi2g1v0295800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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