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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0296400 |
| Transcript ID | LotjaGi2g1v0296400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WRKY family transcription factor; TAIR: AT1G69310.1 WRKY DNA-binding protein 57; Swiss-Prot: sp|Q9C983|WRK57_ARATH Probable WRKY transcription factor 57; TrEMBL-Plants: tr|A0A151R2J2|A0A151R2J2_CAJCA Putative WRKY transcription factor 57; Found in the gene: LotjaGi2g1v0296400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77134828..77140987) extracted from Lotus japonicus Gifu genome v1.2.
GTCTACACTAAAAATATATATTATTAAATTCATAAAACAATGTAATAAAAGGGTGTTCACTTTCTCTTCCGCTGTGTGTA TTGACGAGAAAATGCAAAACGCTTCATAAACTTGAAAACCCACGCGTCCCTTCCTCTTCACAACCAACACCCCAAACAAA ACCCTAATCTCCTCTTCCCTTTTCTCTTTTCTCCGCGTTTTCCCGGAAAATCCATCACTTTCCGGGAATCCTCCCACGTC GCACAATCCAATTCGTCCATGTATGGACGACAAAGACAAACCACCTCCCGATCCATCAACCGCCGCTGAGTTCGCAAGCT GGATGCTATGCGCCGACGACTCTGATTTCTTCTCCGGTGACAGGGAGAGAAGCATACTCGGCGACTTCGGCTGGAACCTC GAACCGGACCGGATCTCCGCCGCCGACGATGGATTGTGGCTGCCGCCTCATGCCGCTCCGTCCGGTTCGATCGAAATCAA ACCGACGGCGTCTGCGTCGATTAACCAATCGGTTTCTTCCAGCTCCAGCGAGGATCCACCGGAGAAGTCCACCGTCTCCG ACGAGAAGCCGATTGAAATACCGTGAGTTCGTGAAAACGAAAAAATTCTACTCCGTGTGTGGTCAATTTCGTAATTAGGT TGAAATTTGAAAGGTGAAAAGGGAATGAAAAAAATATCTGAAATCCACATCAACCAGATCGTAATCGAATCAAGTTGTGG TTTGTTTGTTTGTTAGTTTATTTTTTTTATTTTGTTTTGAATTTCAGCTTCTTCGGGGTTAGTGCAATTCTGTGTCCGTA CAATCAGGAATCTTCTTAGTTCTTCTCCCAAACAGAACATTAAGCCGCGTTTTCTTTTTTCCTTGGGGTAAGTTTCACAA TTTTGAAAAGATGAAGGGTTGAAAATAAAAGGGGGGGTTTTACCTTTTCTGGTATCTGAATAGCCTAGAAGCACGAACAC GAGCACCGCCGTTATTGCGGCGGGAATAGCGTGTTCAAGCTCTTTCTGCTTTATCAGCAGAATGATAATAATTCAGTGGC TTTCATTATTTGTACGATTATATAGTCCTAATAATAAACCTTTTTTTTGTTGTCAAAAAAAAAATAATAAACCTTTTTAG TGAAAATTAGAGTATGTAATTGAAGAAAACTCCATATAATAAATCTATACTAACCAGTACCACTTGCAACTTTTTTGTTA TATATGGTCATTTTTACATTAAAATGAATAGTAGATTTTCTACTTTCTACACTTTTGGTGTATGATGTTTATTCATTTCA CTGTTATGCATGTGATAACAATATTGACATCACTGAGCTCATAATTTTATCTATCATGTATGCAATAAATTTTTCATGAC ATTATGCAAATCTCATAAAATAATGCTTGCGTGTTTTCATTATAATTAAGAAGGGCCTCTCCTTTTTTTTCTTCCTCTTG TGGCCCATATTTTATATATGTTTCATTATTATCTTTTTAACCTAAGTTTTGGAGATGGCTGCCATGCAGATATATTTTTG TGTCTTTTGGCCCCGGTGCAATGAGCATCATATATATATATATTTTTGAAGTTAACCGTACGTTGTGGTATTGCATATAA ATTGGATTTCATGATTAACTAAAAAATGGTATGTATGTACTTATTAGTTATTATAGGCTTCTGGTTTAGGTTATGACTTC CTTTTTTTCATGATATTTTGATTTTCAGTAAGATGCTTTTATTTTGATAAATTGCTGGTGACATGTTTTGTAGGAGTAGT AAAAGTAAGAAGAAGGGGCAAAAGCGAATACGGCAGCCGCGGTTTGCATTTATGACCAAAAGTGAAGTTGATCATCTTGA AGATGGCTACAGATGGAGGAAGTATGGTCAGAAGGCAGTTAAAAACAGTCCATTCCCTAGGTTTACACCTACCTTCTCAT TAAATTAACCTTCAACTATATTTCTAATTTTTTTTCCCAAGTACCATACATATGATAGTGATACACATATATAGCATGTT TGGTTGCATGATAAAATATCATCTAAGTTAGAAGCTATACAAATTTCAACTTAGATTTTATTCAAATCATGAAACCAAAC AATTTGGTTTCTCTTAAATTTCTGTTTAGATATCAATAGGAAAACCTACTAAGGAAAAAAAAAATGATCAGAAGAGTAAA TAAATGACTTTCTAAAGTTCTAACTTCTATCATCACCATTACAGTGATCTAACTTGTCTATTGCTAGACTGACGTAATAT CAAAAGGATTTAATATGAAATAAAAGAATATTAGTAATGATTTTAAACATTTACATTTATATTTATTATATGTGGAATTA AAAATCAAAAGAAGAATTTAAATTCTTTGCTGTTGACTGCACTACAATCTCAAATGTAGACACTTCAAATATGAGCTATT GAATTTTAATCAGATGACAAGAAACCACAGACTGCAGCGAATGCAAGGACTTCTGACTGCAAGGAATTCAGGTTCATCAT ATGGATGATATGGCGCCTAGTCATCAAAACATGAGTTCTTGAAAGCTTTTGAATAAACCGGAAAGGACAATTATTTTACA AGAAAAGCTAATTGTTAATATTCTGATGGATCTGTGTCTTTTCCAGAAGCTATTATCGCTGCACAAACAGCAAATGCACG GTGAAGAAAAGGGTTGAACGCTCTTCTGAGGATCCAACTACTGTGATTACTACATATGAAGGCCAACATTGTCATCACAC CGTTGGATTTCCTCGAGGGGGCTTCATTAATCATGAAGCTGCTTTCACCAGCGGCCAGTTGGGTCCTCCAATGTCACGAT TCTATTATCCAATTCAATTATCAAGAGAGAACACTTCAAGCAGCATTTCTCAGCCTTCCCAAGCACATGATGAAGCTGGA GGATCAAGCACGATGATGCCAGCTGATGACGATGCGTCGCCACAGCCTCCTACGGATGAAGGACTGCTTGGAGATATTGT ACCTCCAGGAATGCGCAACAGATCATGAGTCAAATATTTATTTCTTGGTACTTCATCCAACCTCGCGTGATCTATTTATT TACATTTTCAATTGCATTTTTATTGAGTTTAAAGGAGATCATTGGCAAAACTAAAAGCCCAGCAATATTTTTCTGAAGCC TAGATGGAAATAAGCACTTTAAGATATATACTCTAACATAATAAACAAATAATAATAGAGATGCTAATCACGATTATGGC ATATAGTATATTGGTTTAGAACAAGAATATATGTGTGTAAGAGTGAGAGAAGTAAATTTTGATCATTAGATCTAATCACT AATGACTAAAATTAAAATATGATATCATGTGACCATTAGTTCTCTCACTCATAAAGAAATGCACTCACATAAGAAAAAAT TTCTCATGTGCATATGATACATCCCCCTATTTGTGAATATTAAGCACTACTATGAATTCTAAGTTCTAGCATTGGGATGG TTAGTAATTAATTATACTGGTTGGCAATAAAAAGGACATTATTAATGATGAACTCTAGAAGCCTAACTATATTCAAATCT ATGCTTAGCTATGGTAATAGTTTATTGATTTAGATGTTTTGGCCTTAATTTCTTCAATACAAATATTTTAATTGAAGGTT GGATCTTGTAACTTGTAAATTGATTTTTTTTGGTGCATAACTTGTAAATTGATTTGTTAAAGAAAACATATTTTTATTTT CACTTTAGTTTCGTGGTTCCATTTTTATTTGTATTTTATTTATTTTTTGAATATTTATATAATAAACAGTGAAAGTATTT AGTGTTGCCTCCATAGTTTCCTATATAAATATTTGAAATCGAAATAAGATGAAAGTTTGATAACATTTTAATAAATATAG AATTAAAATTTTAAAACAAAAATCACAAAGGAAACATCTTTCTTATTTTCCTTTTAGTCAAACAGAAAGTCTAAGATGGA AAAATGTCGAAACAATAAGTTTTAATTTTTTTATCATTGCTCCTTTACCCTTATAAAAAGAGAAGGTTTTTTTTTGAACG TGAGAAGGTTTAATACTCTCACTTCATTATTTAAAACATTTATACTAGATTGCAAATTTTGAAAGCTTATTTTAGAAAAT AACACATGACAAATCAATGCAAAAAGTATAGAGAAATCACTTATATATAGTTTTATTCTTCTTCAGAAAGTCAAGTTTGA GTTTGGTTGCAATCACTTAAAGTACTAATTATTATTTGTTAGATTAAAAAAAAAATTAAATGTTCTCATTTAGTAGCTTG AAAATTGACCATAATATTCTTGTGTTACATGACCTCAAGTTTCAACATTTGTAGAAGTTAAACCTCTCTTAGACTATACG TTCAAATATATAATAGCATGATGTAAATTGGTCGGCCTAAATATATGTTGCTTAAGATCAGCTTGCCTGTGGTGGTGACT CGATCGGGCATCATTACGAGCACCGCGCCACCCACTTGATGCTGTTGTCTTTTTCAGCACTTACACATCTTTCTTAGGTT AAAGTATTGATTGGTGGAGTCGACAACTTTAAGGAATTCTAAGAAATTGCCCCTTCAAATGACATGCTTTTAGATTGCTT GCTTTTAAACCTTGAGAACAATGAACCTTTTTATTTCCAGAAAAACAAATAGAGTGGCTTTGGAACTATTTATTATCTCC ATGCACAAGATCAAGCAATTAATCTTAGCTTATACAGTTATACTTATTTTCTGATATATATGAAAATCTCCTTTTATACA CACACTTGTGAGAGAGAGGAGAGAGAAGAGAGAAGAGAGAAGAGAGAGATTTTATTTTGTTATTTATGATCATCTTTTCT TTCAACTTTGAATGCTTTGAGCTTTCTGAATTTTTCGTCTTTTATGTTTGAAAAGTCAGCTACGCATGACAATTGACACA TATGTGTCTCTTTATTGGGCTGATCAACAAACTTTGCTACTTCTTCGGCTGTCTCTAAAAAGATATGATTATATACATAC ATTGAATAGAAGACTCGCTGTCTCAGTCACTTTTTAATTGAGAACATGACATGTCTCTACATATGTTCACCTTCAAACTG AGGAATATATATATGCTCATATAATGAATGTATGGATCAGGTTTCTTGTCATATGTTAATTAACCATTTATAAGGTAGTA AACCGGTGAAATTGAGGTTAGGATGAGAATGGAATGATGGATGCAACCCGGTGAAATTGTTCATTTTGCACGTCTGTATT ATATATAACCTAGCGTTACTGTGTTTATGTGGCTCTGGAGTTCTTGTAATTCTGAAACTGATTCATTCTTATATCCTGTA ATTCATGTAGTTCTGTTAGTACTGCGTTTGATGGGCTAATGATCCATGCATGTGTACCAATCTACTATGGTAGAAGACTA GAAGATTAGAAGGTAATTGACTCTCTTGCTTCCTATTTTGACCTATAGCTAAGGTATATAGATATATGTTGATTCAGATA TTGATTTAGTGATAGTAATTAGAATGTTTGTATACAGACTACGCTTGAATCAGTGGTAACCACTGTGTATAATGTATATT AATGCATGTACCTTTTTCCCCTGTTTCTTTGAATTTGTGTTTCCTTCATAGTTCATACTGTACTTTATGAATCCCAAAAA ATTAAATATAATATAGCATACTTTCATGTCCATTAAAAATGAAGAGATATAAGAAAGAAAAAAAGAATAAAAAATGGAGG TGAAAAAGAATCCAGCAAATGTTACTTGATACATACGTGAGCTTGAAGCAAAAGGGTTGGCTCGTGCGCAATTAGTTGCT GCCTACCTTACTTTATGCCACTCTCACCACTTTGCACTACTTTCTTTTTTCAGGTTTCACTCTTTGTTTTTTATTTTGAT TTCCTTACTTTTCTCTCATCTTTTTTACTCCCTTTCATGGTTACTTTTACGATCAGCCTGTCCCTCTCCATTACATGACT TTGCATTAATAATTATAATTTATAAAATGAGTTCTAATTTCTGTACGATACTTTTATCTTTTAAGACAAGCACCAAGTAC CTGCGTTTAATTATAAACTCTGCATATGAACTCTGGTTTGTCACAGATTTTTACCACCACAAATTACAGGTGCCTAATAA TTGCCACAAAGTATTACACAAATCATTTTTGTTTGTAAATTATTGGTTTAACGGAAAAGTTTTTTTTTCACTATTTGAAC
CDS sequence (LotjaGi2g1v0296400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGACAAAGACAAACCACCTCCCGATCCATCAACCGCCGCTGAGTTCGCAAGCTGGATGCTATGCGCCGACGACTC TGATTTCTTCTCCGGTGACAGGGAGAGAAGCATACTCGGCGACTTCGGCTGGAACCTCGAACCGGACCGGATCTCCGCCG CCGACGATGGATTGTGGCTGCCGCCTCATGCCGCTCCGTCCGGTTCGATCGAAATCAAACCGACGGCGTCTGCGTCGATT AACCAATCGGTTTCTTCCAGCTCCAGCGAGGATCCACCGGAGAAGTCCACCGTCTCCGACGAGAAGCCGATTGAAATACC GAGTAGTAAAAGTAAGAAGAAGGGGCAAAAGCGAATACGGCAGCCGCGGTTTGCATTTATGACCAAAAGTGAAGTTGATC ATCTTGAAGATGGCTACAGATGGAGGAAGTATGGTCAGAAGGCAGTTAAAAACAGTCCATTCCCTAGAAGCTATTATCGC TGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTTGAACGCTCTTCTGAGGATCCAACTACTGTGATTACTACATATGA AGGCCAACATTGTCATCACACCGTTGGATTTCCTCGAGGGGGCTTCATTAATCATGAAGCTGCTTTCACCAGCGGCCAGT TGGGTCCTCCAATGTCACGATTCTATTATCCAATTCAATTATCAAGAGAGAACACTTCAAGCAGCATTTCTCAGCCTTCC CAAGCACATGATGAAGCTGGAGGATCAAGCACGATGATGCCAGCTGATGACGATGCGTCGCCACAGCCTCCTACGGATGA AGGACTGCTTGGAGATATTGTACCTCCAGGAATGCGCAACAGATCATGA
Protein sequence (LotjaGi2g1v0296400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDDKDKPPPDPSTAAEFASWMLCADDSDFFSGDRERSILGDFGWNLEPDRISAADDGLWLPPHAAPSGSIEIKPTASASI NQSVSSSSSEDPPEKSTVSDEKPIEIPSSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYR CTNSKCTVKKRVERSSEDPTTVITTYEGQHCHHTVGFPRGGFINHEAAFTSGQLGPPMSRFYYPIQLSRENTSSSISQPS QAHDEAGGSSTMMPADDDASPQPPTDEGLLGDIVPPGMRNRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 273 | 273 | 3.5E-103 | – | |
| PANTHER | 1 | 273 | 273 | 3.5E-103 | – | |
| MobiDBLite | 55 | 123 | 69 | - | – | |
| MobiDBLite | 72 | 93 | 22 | - | – | |
| MobiDBLite | 94 | 112 | 19 | - | – | |
| Gene3D | 120 | 195 | 76 | 1.7E-31 | ||
| SUPERFAMILY | 127 | 193 | 67 | 5.1E-28 | ||
| ProSiteProfiles | 130 | 195 | 66 | 29.746 | ||
| SMART | 135 | 194 | 60 | 1.4E-37 | ||
| Pfam | 136 | 192 | 57 | 2.5E-25 | ||
| MobiDBLite | 230 | 282 | 53 | - | – | |
| MobiDBLite | 230 | 247 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi2g1v0296400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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